RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 KIAA1683Q9H0B3 1180 aa17.5■□□□□ 0.39
CHD1-202ENST00000414220 KANSL2Q9H9L4 492 aa17.5■□□□□ 0.39
CHD1-202ENST00000414220 LAMB1P07942 1786 aa17.5■□□□□ 0.39
CHD1-202ENST00000414220 AKR1B1P15121 316 aa17.49■□□□□ 0.39
CHD1-202ENST00000414220 GCLCP48506 637 aaPredicted RBP17.49■□□□□ 0.39
CHD1-202ENST00000414220 ICA1Q05084 483 aa17.49■□□□□ 0.39
CHD1-202ENST00000414220 PPP4R3BQ5MIZ7 849 aa17.49■□□□□ 0.39
CHD1-202ENST00000414220 STK11IPQ8N1F8 1099 aa17.49■□□□□ 0.39
CHD1-202ENST00000414220 SIPA1L1O43166 1804 aa17.49■□□□□ 0.39
CHD1-202ENST00000414220 GNRH1P01148 92 aa17.48■□□□□ 0.39
CHD1-202ENST00000414220 CYP2C8P10632 490 aa17.48■□□□□ 0.39
CHD1-202ENST00000414220 HSPD1P10809 573 aaKnown RBP17.48■□□□□ 0.39
CHD1-202ENST00000414220 HOXA7P31268 230 aaPredicted RBP17.48■□□□□ 0.39
CHD1-202ENST00000414220 ATP2B2Q01814 1243 aa17.48■□□□□ 0.39
CHD1-202ENST00000414220 EVX2Q03828 476 aa17.48■□□□□ 0.39
CHD1-202ENST00000414220 TREML2Q5T2D2 321 aa17.48■□□□□ 0.39
CHD1-202ENST00000414220 C17orf99Q6UX52 265 aa17.48■□□□□ 0.39
CHD1-202ENST00000414220 GTF3C2Q8WUA4 911 aaPredicted RBP17.48■□□□□ 0.39
CHD1-202ENST00000414220 C12orf42Q96LP6 360 aa17.48■□□□□ 0.39
CHD1-202ENST00000414220 MCOLN1Q9GZU1 580 aa17.48■□□□□ 0.39
CHD1-202ENST00000414220 EFCC1Q9HA90 598 aa17.48■□□□□ 0.39
CHD1-202ENST00000414220 CPA4Q9UI42 421 aa17.48■□□□□ 0.39
CHD1-202ENST00000414220 TRIM17Q9Y577 477 aa17.48■□□□□ 0.39
CHD1-202ENST00000414220 ROBO3Q96MS0 1386 aa17.48■□□□□ 0.39
CHD1-202ENST00000414220 DDX60LQ5H9U9 1706 aaKnown RBP17.47■□□□□ 0.39
CHD1-202ENST00000414220 USP17L15C9J2P7 530 aa17.47■□□□□ 0.39
CHD1-202ENST00000414220 USP17L13C9JLJ4 530 aa17.47■□□□□ 0.39
CHD1-202ENST00000414220 USP17L11C9JVI0 530 aa17.47■□□□□ 0.39
CHD1-202ENST00000414220 USP17L18D6R9N7 530 aa17.47■□□□□ 0.39
CHD1-202ENST00000414220 USP17L22D6RA61 530 aa17.47■□□□□ 0.39
CHD1-202ENST00000414220 USP17L17D6RBQ6 530 aa17.47■□□□□ 0.39
CHD1-202ENST00000414220 USP17L19D6RCP7 530 aa17.47■□□□□ 0.39
CHD1-202ENST00000414220 USP17L20D6RJB6 530 aa17.47■□□□□ 0.39
CHD1-202ENST00000414220 TSPY3P0CV98 308 aa17.47■□□□□ 0.39
CHD1-202ENST00000414220 TSPY8P0CW00 308 aa17.47■□□□□ 0.39
CHD1-202ENST00000414220 GSPT1P15170 499 aaKnown RBP17.47■□□□□ 0.39
CHD1-202ENST00000414220 HOXD10P28358 340 aa17.47■□□□□ 0.39
CHD1-202ENST00000414220 USP17L24Q0WX57 530 aa17.47■□□□□ 0.39
CHD1-202ENST00000414220 ZYXQ15942 572 aaKnown RBP17.47■□□□□ 0.39
CHD1-202ENST00000414220 SHROOM1Q2M3G4 852 aaPredicted RBP17.47■□□□□ 0.39
CHD1-202ENST00000414220 CD99L2Q8TCZ2 262 aa17.47■□□□□ 0.39
CHD1-202ENST00000414220 CTNNA3Q9UI47 895 aa17.47■□□□□ 0.39
CHD1-202ENST00000414220 FGAP02671 866 aa17.46■□□□□ 0.39
CHD1-202ENST00000414220 RASA1P20936 1047 aa17.46■□□□□ 0.39
CHD1-202ENST00000414220 GUCY1A2P33402 732 aa17.46■□□□□ 0.39
CHD1-202ENST00000414220 VPS53Q5VIR6 699 aa17.46■□□□□ 0.39
CHD1-202ENST00000414220 ZNF589Q86UQ0 364 aaPredicted RBP17.46■□□□□ 0.39
CHD1-202ENST00000414220 ACER1Q8TDN7 264 aa17.46■□□□□ 0.39
CHD1-202ENST00000414220 LPAR1Q92633 364 aa17.46■□□□□ 0.39
CHD1-202ENST00000414220 ASCC2Q9H1I8 757 aaPredicted RBP17.46■□□□□ 0.39
CHD1-202ENST00000414220 GOPCQ9HD26 462 aa17.46■□□□□ 0.39
CHD1-202ENST00000414220 EMILIN3Q9NT22 766 aa17.46■□□□□ 0.39
CHD1-202ENST00000414220 ANAPC4Q9UJX5 808 aa17.46■□□□□ 0.39
CHD1-202ENST00000414220 ATAD5Q96QE3 1844 aa17.46■□□□□ 0.39
CHD1-202ENST00000414220 CASP8AP2Q9UKL3 1982 aa17.46■□□□□ 0.39
CHD1-202ENST00000414220 ZMYM6O95789 1325 aa17.46■□□□□ 0.38
CHD1-202ENST00000414220 RAD50Q92878 1312 aa17.46■□□□□ 0.38
CHD1-202ENST00000414220 BAZ2AQ9UIF9 1905 aaKnown RBP17.45■□□□□ 0.38
CHD1-202ENST00000414220 ZNF213O14771 459 aa17.45■□□□□ 0.38
CHD1-202ENST00000414220 PCP11498 1178 aaKnown RBP17.45■□□□□ 0.38
CHD1-202ENST00000414220 LACTBP83111 547 aaPredicted RBP17.45■□□□□ 0.38
CHD1-202ENST00000414220 RNF41Q9H4P4 317 aaPredicted RBP17.45■□□□□ 0.38
CHD1-202ENST00000414220 TOMM22Q9NS69 142 aa17.45■□□□□ 0.38
CHD1-202ENST00000414220 TMX2Q9Y320 296 aa17.45■□□□□ 0.38
CHD1-202ENST00000414220 TSPY2A6NKD2 308 aa17.44■□□□□ 0.38
CHD1-202ENST00000414220 SMIM22K7EJ46 135 aa17.44■□□□□ 0.38
CHD1-202ENST00000414220 PRDM1O75626 825 aa17.44■□□□□ 0.38
CHD1-202ENST00000414220 FMNL1O95466 1100 aaPredicted RBP17.44■□□□□ 0.38
CHD1-202ENST00000414220 EEF2P13639 858 aaKnown RBP17.44■□□□□ 0.38
CHD1-202ENST00000414220 NT5C2P49902 561 aa17.44■□□□□ 0.38
CHD1-202ENST00000414220 PRMT2P55345 433 aa17.44■□□□□ 0.38
CHD1-202ENST00000414220 FCGRTP55899 365 aa17.44■□□□□ 0.38
CHD1-202ENST00000414220 FBXO46Q6PJ61 603 aaPredicted RBP17.44■□□□□ 0.38
CHD1-202ENST00000414220 CCAR1Q8IX12 1150 aaKnown RBP17.44■□□□□ 0.38
CHD1-202ENST00000414220 DSCC1Q9BVC3 393 aa17.44■□□□□ 0.38
CHD1-202ENST00000414220 PPP4R2Q9NY27 417 aa17.44■□□□□ 0.38
CHD1-202ENST00000414220 RAD21O60216 631 aa17.43■□□□□ 0.38
CHD1-202ENST00000414220 RANBP6O60518 1105 aaKnown RBP17.43■□□□□ 0.38
CHD1-202ENST00000414220 BCRP11274 1271 aa17.43■□□□□ 0.38
CHD1-202ENST00000414220 PSMC4P43686 418 aa17.43■□□□□ 0.38
CHD1-202ENST00000414220 TFAP4Q01664 338 aa17.43■□□□□ 0.38
CHD1-202ENST00000414220 CTDSPL2Q05D32 466 aa17.43■□□□□ 0.38
CHD1-202ENST00000414220 IMMTQ16891 758 aaKnown RBP17.43■□□□□ 0.38
CHD1-202ENST00000414220 FAM110CQ1W6H9 321 aa17.43■□□□□ 0.38
CHD1-202ENST00000414220 CASC1Q6TDU7 716 aa17.43■□□□□ 0.38
CHD1-202ENST00000414220 MFSD6Q6ZSS7 791 aa17.43■□□□□ 0.38
CHD1-202ENST00000414220 OTOP1Q7RTM1 612 aa17.43■□□□□ 0.38
CHD1-202ENST00000414220 ANKRD13CQ8N6S4 541 aa17.43■□□□□ 0.38
CHD1-202ENST00000414220 NEDD1Q8NHV4 660 aa17.43■□□□□ 0.38
CHD1-202ENST00000414220 ABHD8Q96I13 439 aa17.43■□□□□ 0.38
CHD1-202ENST00000414220 VCPKMTQ9H867 229 aa17.43■□□□□ 0.38
CHD1-202ENST00000414220 HOXC10Q9NYD6 342 aa17.43■□□□□ 0.38
CHD1-202ENST00000414220 NYAP2Q9P242 653 aa17.43■□□□□ 0.38
CHD1-202ENST00000414220 ADGRA2Q96PE1 1338 aa17.43■□□□□ 0.38
CHD1-202ENST00000414220 PHIPQ8WWQ0 1821 aa17.42■□□□□ 0.38
CHD1-202ENST00000414220 A0A1W2PRG0 241 aa17.42■□□□□ 0.38
CHD1-202ENST00000414220 FOXP2O15409 715 aa17.42■□□□□ 0.38
CHD1-202ENST00000414220 VCAM1P19320 739 aa17.42■□□□□ 0.38
CHD1-202ENST00000414220 CHMLP26374 656 aa17.42■□□□□ 0.38
CHD1-202ENST00000414220 HERVK_113P62684 666 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms