RNA–Protein interactions for RNA: ENST00000413637.1

LINC01044-201, Transcript of long intergenic non-protein coding RNA 1044, humanhuman

TSL 3 BASIC

Gene LINC01044, Length 657 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01044-201ENST00000413637 ZNFX1Q9P2E3 1918 aaKnown RBP14.28□□□□□ -0.12
LINC01044-201ENST00000413637 GPAA1O43292 621 aa14.27□□□□□ -0.13
LINC01044-201ENST00000413637 CDK8P49336 464 aa14.27□□□□□ -0.13
LINC01044-201ENST00000413637 KIF22Q14807 665 aa14.27□□□□□ -0.13
LINC01044-201ENST00000413637 MTFR1Q15390 333 aa14.27□□□□□ -0.13
LINC01044-201ENST00000413637 FAM110CQ1W6H9 321 aa14.27□□□□□ -0.13
LINC01044-201ENST00000413637 SLC9C1Q4G0N8 1177 aa14.27□□□□□ -0.13
LINC01044-201ENST00000413637 SMC5Q8IY18 1101 aa14.27□□□□□ -0.13
LINC01044-201ENST00000413637 APPBP2Q92624 585 aa14.27□□□□□ -0.13
LINC01044-201ENST00000413637 C19orf81C9J6K1 198 aa14.26□□□□□ -0.13
LINC01044-201ENST00000413637 CNMDO75829 334 aa14.26□□□□□ -0.13
LINC01044-201ENST00000413637 GLRX3O76003 335 aaKnown RBP14.26□□□□□ -0.13
LINC01044-201ENST00000413637 GNRH1P01148 92 aa14.26□□□□□ -0.13
LINC01044-201ENST00000413637 VCAM1P19320 739 aa14.26□□□□□ -0.13
LINC01044-201ENST00000413637 EN2P19622 333 aaPredicted RBP14.26□□□□□ -0.13
LINC01044-201ENST00000413637 PDE1AP54750 535 aa14.26□□□□□ -0.13
LINC01044-201ENST00000413637 FCGRTP55899 365 aa14.26□□□□□ -0.13
LINC01044-201ENST00000413637 HERVK_113P62684 666 aa14.26□□□□□ -0.13
LINC01044-201ENST00000413637 IRX6P78412 446 aaPredicted RBP14.26□□□□□ -0.13
LINC01044-201ENST00000413637 ZSCAN25Q6NSZ9 544 aa14.26□□□□□ -0.13
LINC01044-201ENST00000413637 C16orf86Q6ZW13 317 aa14.26□□□□□ -0.13
LINC01044-201ENST00000413637 GCC1Q96CN9 775 aa14.26□□□□□ -0.13
LINC01044-201ENST00000413637 C12orf42Q96LP6 360 aa14.26□□□□□ -0.13
LINC01044-201ENST00000413637 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.26□□□□□ -0.13
LINC01044-201ENST00000413637 LNPKQ9C0E8 428 aa14.26□□□□□ -0.13
LINC01044-201ENST00000413637 KIAA1683Q9H0B3 1180 aa14.26□□□□□ -0.13
LINC01044-201ENST00000413637 TMOD4Q9NZQ9 345 aa14.26□□□□□ -0.13
LINC01044-201ENST00000413637 RBPJLQ9UBG7 517 aa14.26□□□□□ -0.13
LINC01044-201ENST00000413637 STAP2Q9UGK3 403 aa14.26□□□□□ -0.13
LINC01044-201ENST00000413637 FRMPD3Q5JV73 1810 aa14.26□□□□□ -0.13
LINC01044-201ENST00000413637 ALPK3Q96L96 1907 aa14.25□□□□□ -0.13
LINC01044-201ENST00000413637 ROBO3Q96MS0 1386 aa14.25□□□□□ -0.13
LINC01044-201ENST00000413637 MPHOSPH10O00566 681 aaKnown RBP14.25□□□□□ -0.13
LINC01044-201ENST00000413637 FLT3LGP49771 235 aa14.25□□□□□ -0.13
LINC01044-201ENST00000413637 Q3C1V9 767 aa14.25□□□□□ -0.13
LINC01044-201ENST00000413637 ZMYM1Q5SVZ6 1142 aa14.25□□□□□ -0.13
LINC01044-201ENST00000413637 B4GALNT3Q6L9W6 998 aa14.25□□□□□ -0.13
LINC01044-201ENST00000413637 USP17L2Q6R6M4 530 aa14.25□□□□□ -0.13
LINC01044-201ENST00000413637 CCDC129Q6ZRS4 1044 aa14.25□□□□□ -0.13
LINC01044-201ENST00000413637 STK11IPQ8N1F8 1099 aa14.25□□□□□ -0.13
LINC01044-201ENST00000413637 MORF4L1Q9UBU8 362 aa14.25□□□□□ -0.13
LINC01044-201ENST00000413637 PNMA3Q9UL41 463 aa14.25□□□□□ -0.13
LINC01044-201ENST00000413637 ERC2O15083 957 aa14.24□□□□□ -0.13
LINC01044-201ENST00000413637 ELNP15502 786 aa14.24□□□□□ -0.13
LINC01044-201ENST00000413637 GCLCP48506 637 aaPredicted RBP14.24□□□□□ -0.13
LINC01044-201ENST00000413637 FEZ1Q99689 392 aa14.24□□□□□ -0.13
LINC01044-201ENST00000413637 FSD1Q9BTV5 496 aa14.24□□□□□ -0.13
LINC01044-201ENST00000413637 PORCNQ9H237 461 aa14.24□□□□□ -0.13
LINC01044-201ENST00000413637 SWAP70Q9UH65 585 aa14.24□□□□□ -0.13
LINC01044-201ENST00000413637 GJD2Q9UKL4 321 aa14.24□□□□□ -0.13
LINC01044-201ENST00000413637 LAMA4Q16363 1823 aa14.24□□□□□ -0.13
LINC01044-201ENST00000413637 TNPO2O14787 897 aaKnown RBP14.23□□□□□ -0.13
LINC01044-201ENST00000413637 PRMT2P55345 433 aa14.23□□□□□ -0.13
LINC01044-201ENST00000413637 IRX3P78415 501 aaPredicted RBP14.23□□□□□ -0.13
LINC01044-201ENST00000413637 PABPC4Q13310 644 aaKnown RBP eCLIP14.23□□□□□ -0.13
LINC01044-201ENST00000413637 ARHGEF6Q15052 776 aa14.23□□□□□ -0.13
LINC01044-201ENST00000413637 SBK1Q52WX2 424 aa14.23□□□□□ -0.13
LINC01044-201ENST00000413637 CATSPERGQ6ZRH7 1159 aa14.23□□□□□ -0.13
LINC01044-201ENST00000413637 SHISA4Q96DD7 197 aa14.23□□□□□ -0.13
LINC01044-201ENST00000413637 CABP5Q9NP86 173 aa14.23□□□□□ -0.13
LINC01044-201ENST00000413637 ARPP21Q9UBL0 812 aaPredicted RBP14.23□□□□□ -0.13
LINC01044-201ENST00000413637 TACC3Q9Y6A5 838 aa14.23□□□□□ -0.13
LINC01044-201ENST00000413637 CEP290O15078 2479 aa14.23□□□□□ -0.13
LINC01044-201ENST00000413637 ZFYP08048 801 aaPredicted RBP14.22□□□□□ -0.13
LINC01044-201ENST00000413637 RASA1P20936 1047 aa14.22□□□□□ -0.13
LINC01044-201ENST00000413637 GRK4P32298 578 aa14.22□□□□□ -0.13
LINC01044-201ENST00000413637 VPS53Q5VIR6 699 aa14.22□□□□□ -0.13
LINC01044-201ENST00000413637 TMEM179Q6ZVK1 233 aa14.22□□□□□ -0.13
LINC01044-201ENST00000413637 RAET1EQ8TD07 263 aa14.22□□□□□ -0.13
LINC01044-201ENST00000413637 PAGR1Q9BTK6 254 aa14.22□□□□□ -0.13
LINC01044-201ENST00000413637 RPAP3Q9H6T3 665 aaPredicted RBP14.22□□□□□ -0.13
LINC01044-201ENST00000413637 BTBD7Q9P203 1132 aa14.22□□□□□ -0.13
LINC01044-201ENST00000413637 PLXNA1Q9UIW2 1896 aa14.22□□□□□ -0.13
LINC01044-201ENST00000413637 SMCHD1A6NHR9 2005 aa14.21□□□□□ -0.13
LINC01044-201ENST00000413637 A0A0D9SFI3 127 aa14.21□□□□□ -0.13
LINC01044-201ENST00000413637 SPDYE16A6NNV3 312 aaPredicted RBP14.21□□□□□ -0.13
LINC01044-201ENST00000413637 MINDY4BA8MYZ0 360 aa14.21□□□□□ -0.13
LINC01044-201ENST00000413637 ADCY3O60266 1144 aa14.21□□□□□ -0.13
LINC01044-201ENST00000413637 USP14P54578 494 aa14.21□□□□□ -0.13
LINC01044-201ENST00000413637 ERVK-9P63128 1117 aa14.21□□□□□ -0.13
LINC01044-201ENST00000413637 ERVK-24P63145 666 aa14.21□□□□□ -0.13
LINC01044-201ENST00000413637 NUCB1Q02818 461 aa14.21□□□□□ -0.13
LINC01044-201ENST00000413637 ICA1Q05084 483 aa14.21□□□□□ -0.13
LINC01044-201ENST00000413637 TRIM32Q13049 653 aa14.21□□□□□ -0.13
LINC01044-201ENST00000413637 AAMPQ13685 434 aa14.21□□□□□ -0.13
LINC01044-201ENST00000413637 GIMAP6Q6P9H5 292 aa14.21□□□□□ -0.13
LINC01044-201ENST00000413637 CHD1LQ86WJ1 897 aa14.21□□□□□ -0.13
LINC01044-201ENST00000413637 PLEKHM2Q8IWE5 1019 aa14.21□□□□□ -0.13
LINC01044-201ENST00000413637 IFNL3Q8IZI9 196 aa14.21□□□□□ -0.13
LINC01044-201ENST00000413637 FAM227BQ96M60 508 aa14.21□□□□□ -0.13
LINC01044-201ENST00000413637 ZNF236Q9UL36 1845 aa14.2□□□□□ -0.14
LINC01044-201ENST00000413637 USP17L15C9J2P7 530 aa14.2□□□□□ -0.14
LINC01044-201ENST00000413637 USP17L13C9JLJ4 530 aa14.2□□□□□ -0.14
LINC01044-201ENST00000413637 USP17L11C9JVI0 530 aa14.2□□□□□ -0.14
LINC01044-201ENST00000413637 USP17L18D6R9N7 530 aa14.2□□□□□ -0.14
LINC01044-201ENST00000413637 USP17L22D6RA61 530 aa14.2□□□□□ -0.14
LINC01044-201ENST00000413637 USP17L17D6RBQ6 530 aa14.2□□□□□ -0.14
LINC01044-201ENST00000413637 USP17L19D6RCP7 530 aa14.2□□□□□ -0.14
LINC01044-201ENST00000413637 USP17L20D6RJB6 530 aa14.2□□□□□ -0.14
LINC01044-201ENST00000413637 PRDM1O75626 825 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms