RNA–Protein interactions for RNA: ENST00000411844.1

CLUHP3-202, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 2

Gene CLUHP3, Length 582 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-202ENST00000411844 ALG1Q9BT22 464 aa13.53□□□□□ -0.24
CLUHP3-202ENST00000411844 SCAND2PQ9GZW5 306 aaPredicted RBP13.53□□□□□ -0.24
CLUHP3-202ENST00000411844 ELP1O95163 1332 aa13.53□□□□□ -0.24
CLUHP3-202ENST00000411844 MYO1BO43795 1136 aa13.52□□□□□ -0.25
CLUHP3-202ENST00000411844 PRPF40AO75400 957 aaKnown RBP13.52□□□□□ -0.25
CLUHP3-202ENST00000411844 NCLP19338 710 aaKnown RBP13.52□□□□□ -0.25
CLUHP3-202ENST00000411844 SMARCA1P28370 1054 aa13.52□□□□□ -0.25
CLUHP3-202ENST00000411844 SHMT1P34896 483 aa13.52□□□□□ -0.25
CLUHP3-202ENST00000411844 AKAP17AQ02040 695 aaKnown RBP13.52□□□□□ -0.25
CLUHP3-202ENST00000411844 FUT2Q10981 343 aa13.52□□□□□ -0.25
CLUHP3-202ENST00000411844 TRIM29Q14134 588 aa13.52□□□□□ -0.25
CLUHP3-202ENST00000411844 GRM4Q14833 912 aa13.52□□□□□ -0.25
CLUHP3-202ENST00000411844 SLC4A8Q2Y0W8 1093 aa13.52□□□□□ -0.25
CLUHP3-202ENST00000411844 FAM83AQ86UY5 434 aa13.52□□□□□ -0.25
CLUHP3-202ENST00000411844 CCDC144CPQ8IYA2 1237 aa13.52□□□□□ -0.25
CLUHP3-202ENST00000411844 NLGN2Q8NFZ4 835 aa13.52□□□□□ -0.25
CLUHP3-202ENST00000411844 FAM151AQ8WW52 585 aa13.52□□□□□ -0.25
CLUHP3-202ENST00000411844 SLC26A6Q9BXS9 759 aa13.52□□□□□ -0.25
CLUHP3-202ENST00000411844 TDRD3Q9H7E2 651 aaKnown RBP13.52□□□□□ -0.25
CLUHP3-202ENST00000411844 HERC5Q9UII4 1024 aaKnown RBP13.52□□□□□ -0.25
CLUHP3-202ENST00000411844 CFAP45Q9UL16 551 aa13.52□□□□□ -0.25
CLUHP3-202ENST00000411844 NMT2O60551 498 aa13.51□□□□□ -0.25
CLUHP3-202ENST00000411844 XBP1P17861 261 aa13.51□□□□□ -0.25
CLUHP3-202ENST00000411844 TATDN1Q6P1N9 297 aa13.51□□□□□ -0.25
CLUHP3-202ENST00000411844 PHKBQ93100 1093 aa13.51□□□□□ -0.25
CLUHP3-202ENST00000411844 ZNF396Q96N95 335 aaPredicted RBP13.51□□□□□ -0.25
CLUHP3-202ENST00000411844 TMEM47Q9BQJ4 181 aa13.51□□□□□ -0.25
CLUHP3-202ENST00000411844 TRIM34Q9BYJ4 488 aa13.51□□□□□ -0.25
CLUHP3-202ENST00000411844 MTMR4Q9NYA4 1195 aa13.51□□□□□ -0.25
CLUHP3-202ENST00000411844 ZNF70Q9UC06 446 aaPredicted RBP13.51□□□□□ -0.25
CLUHP3-202ENST00000411844 DNM1Q05193 864 aaKnown RBP13.5□□□□□ -0.25
CLUHP3-202ENST00000411844 FERMT3Q86UX7 667 aa13.5□□□□□ -0.25
CLUHP3-202ENST00000411844 CEP95Q96GE4 821 aa13.5□□□□□ -0.25
CLUHP3-202ENST00000411844 SYNPO2Q9UMS6 1093 aa13.5□□□□□ -0.25
CLUHP3-202ENST00000411844 STX8Q9UNK0 236 aa13.5□□□□□ -0.25
CLUHP3-202ENST00000411844 ZBTB12Q9Y330 459 aaPredicted RBP13.5□□□□□ -0.25
CLUHP3-202ENST00000411844 PCDHAC2Q9Y5I4 1007 aa13.5□□□□□ -0.25
CLUHP3-202ENST00000411844 DDX49Q9Y6V7 483 aaKnown RBP13.5□□□□□ -0.25
CLUHP3-202ENST00000411844 PALM3A6NDB9 673 aaPredicted RBP13.49□□□□□ -0.25
CLUHP3-202ENST00000411844 DDTLA6NHG4 134 aaPredicted RBP13.49□□□□□ -0.25
CLUHP3-202ENST00000411844 DTNBO60941 627 aa13.49□□□□□ -0.25
CLUHP3-202ENST00000411844 TTLL1O95922 423 aa13.49□□□□□ -0.25
CLUHP3-202ENST00000411844 LMNB1P20700 586 aa13.49□□□□□ -0.25
CLUHP3-202ENST00000411844 TNNI2P48788 182 aa13.49□□□□□ -0.25
CLUHP3-202ENST00000411844 UBE2HP62256 183 aa13.49□□□□□ -0.25
CLUHP3-202ENST00000411844 KIF23Q02241 960 aaPredicted RBP13.49□□□□□ -0.25
CLUHP3-202ENST00000411844 TCP10Q12799 353 aa13.49□□□□□ -0.25
CLUHP3-202ENST00000411844 SAFBQ15424 915 aaKnown RBP eCLIP13.49□□□□□ -0.25
CLUHP3-202ENST00000411844 KRT40Q6A162 431 aa13.49□□□□□ -0.25
CLUHP3-202ENST00000411844 SH3BP5LQ7L8J4 393 aa13.49□□□□□ -0.25
CLUHP3-202ENST00000411844 USP48Q86UV5 1035 aa13.49□□□□□ -0.25
CLUHP3-202ENST00000411844 ZSCAN29Q8IWY8 852 aaPredicted RBP13.49□□□□□ -0.25
CLUHP3-202ENST00000411844 ZFPM1Q8IX07 1006 aa13.49□□□□□ -0.25
CLUHP3-202ENST00000411844 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.49□□□□□ -0.25
CLUHP3-202ENST00000411844 MYOZ2Q9NPC6 264 aa13.49□□□□□ -0.25
CLUHP3-202ENST00000411844 CNPY2Q9Y2B0 182 aa13.49□□□□□ -0.25
CLUHP3-202ENST00000411844 CNTNAP5Q8WYK1 1306 aa13.48□□□□□ -0.25
CLUHP3-202ENST00000411844 TBC1D12O60347 775 aa13.48□□□□□ -0.25
CLUHP3-202ENST00000411844 AKR1B1P15121 316 aa13.48□□□□□ -0.25
CLUHP3-202ENST00000411844 U2AF2P26368 475 aaKnown RBP eCLIP13.48□□□□□ -0.25
CLUHP3-202ENST00000411844 CACNB3P54284 484 aa13.48□□□□□ -0.25
CLUHP3-202ENST00000411844 RASSF7Q02833 373 aa13.48□□□□□ -0.25
CLUHP3-202ENST00000411844 TNFAIP1Q13829 316 aa13.48□□□□□ -0.25
CLUHP3-202ENST00000411844 CERKLQ49MI3 558 aaPredicted RBP13.48□□□□□ -0.25
CLUHP3-202ENST00000411844 TMEM179Q6ZVK1 233 aa13.48□□□□□ -0.25
CLUHP3-202ENST00000411844 SPZ1Q9BXG8 430 aa13.48□□□□□ -0.25
CLUHP3-202ENST00000411844 FHDC1Q9C0D6 1143 aaPredicted RBP13.48□□□□□ -0.25
CLUHP3-202ENST00000411844 DNAJC18Q9H819 358 aa13.48□□□□□ -0.25
CLUHP3-202ENST00000411844 KANSL2Q9H9L4 492 aa13.48□□□□□ -0.25
CLUHP3-202ENST00000411844 SH3GLB2Q9NR46 395 aa13.48□□□□□ -0.25
CLUHP3-202ENST00000411844 NYAP2Q9P242 653 aa13.48□□□□□ -0.25
CLUHP3-202ENST00000411844 CNTNAP1P78357 1384 aa13.47□□□□□ -0.25
CLUHP3-202ENST00000411844 GREB1LQ9C091 1923 aaPredicted RBP13.47□□□□□ -0.25
CLUHP3-202ENST00000411844 WNT10BO00744 389 aa13.47□□□□□ -0.25
CLUHP3-202ENST00000411844 PLEKHA8P1O95397 391 aa13.47□□□□□ -0.25
CLUHP3-202ENST00000411844 MMP1P03956 469 aa13.47□□□□□ -0.25
CLUHP3-202ENST00000411844 SNHG28P0DPA3 235 aa13.47□□□□□ -0.25
CLUHP3-202ENST00000411844 ASPRV1Q53RT3 343 aa13.47□□□□□ -0.25
CLUHP3-202ENST00000411844 SRBD1Q8N5C6 995 aaKnown RBP13.47□□□□□ -0.25
CLUHP3-202ENST00000411844 MKL1Q969V6 931 aa13.47□□□□□ -0.25
CLUHP3-202ENST00000411844 SYAP1Q96A49 352 aaPredicted RBP13.47□□□□□ -0.25
CLUHP3-202ENST00000411844 CSRNP1Q96S65 589 aa13.47□□□□□ -0.25
CLUHP3-202ENST00000411844 FOXP1Q9H334 677 aaPredicted RBP13.47□□□□□ -0.25
CLUHP3-202ENST00000411844 MAD2L2Q9UI95 211 aa13.47□□□□□ -0.25
CLUHP3-202ENST00000411844 ISY1Q9ULR0 285 aaKnown RBP13.47□□□□□ -0.25
CLUHP3-202ENST00000411844 SIPA1L1O43166 1804 aa13.46□□□□□ -0.25
CLUHP3-202ENST00000411844 FIBPO43427 364 aa13.46□□□□□ -0.25
CLUHP3-202ENST00000411844 PARP1P09874 1014 aaKnown RBP13.46□□□□□ -0.25
CLUHP3-202ENST00000411844 PRELPP51888 382 aa13.46□□□□□ -0.25
CLUHP3-202ENST00000411844 GUCY1B3Q02153 619 aa13.46□□□□□ -0.25
CLUHP3-202ENST00000411844 MAP3K10Q02779 954 aa13.46□□□□□ -0.25
CLUHP3-202ENST00000411844 GSE1Q14687 1217 aa13.46□□□□□ -0.25
CLUHP3-202ENST00000411844 PKN1Q16512 942 aa13.46□□□□□ -0.25
CLUHP3-202ENST00000411844 PFKFB3Q16875 520 aaPredicted RBP13.46□□□□□ -0.25
CLUHP3-202ENST00000411844 LEO1Q8WVC0 666 aaPredicted RBP13.46□□□□□ -0.25
CLUHP3-202ENST00000411844 SPATA32Q96LK8 384 aa13.46□□□□□ -0.25
CLUHP3-202ENST00000411844 RTEL1Q9NZ71 1219 aa13.46□□□□□ -0.25
CLUHP3-202ENST00000411844 RCOR1Q9UKL0 485 aa13.46□□□□□ -0.25
CLUHP3-202ENST00000411844 V9GY48 417 aaPredicted RBP13.46□□□□□ -0.25
CLUHP3-202ENST00000411844 CLRN2A0PK11 232 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms