RNA–Protein interactions for RNA: ENST00000411642.6

TTC39A-207, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best)

Gene TTC39A, Length 931 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-207ENST00000411642 TBC1D10CQ8IV04 446 aa11.94□□□□□ -0.5
TTC39A-207ENST00000411642 FAM43AQ8N2R8 423 aa11.94□□□□□ -0.5
TTC39A-207ENST00000411642 FEZ1Q99689 392 aa11.94□□□□□ -0.5
TTC39A-207ENST00000411642 NBPF3Q9H094 633 aa11.94□□□□□ -0.5
TTC39A-207ENST00000411642 ANO2Q9NQ90 1003 aa11.94□□□□□ -0.5
TTC39A-207ENST00000411642 INCENPQ9NQS7 918 aa11.94□□□□□ -0.5
TTC39A-207ENST00000411642 TOMM22Q9NS69 142 aa11.94□□□□□ -0.5
TTC39A-207ENST00000411642 RNF186Q9NXI6 227 aa11.94□□□□□ -0.5
TTC39A-207ENST00000411642 TACC3Q9Y6A5 838 aa11.94□□□□□ -0.5
TTC39A-207ENST00000411642 U3KPZ7 1027 aaPredicted RBP11.94□□□□□ -0.5
TTC39A-207ENST00000411642 BTBD19C9JJ37 291 aa11.93□□□□□ -0.5
TTC39A-207ENST00000411642 USP17L10C9JJH3 530 aa11.93□□□□□ -0.5
TTC39A-207ENST00000411642 FOXN1O15353 648 aa11.93□□□□□ -0.5
TTC39A-207ENST00000411642 ORC4O43929 436 aa11.93□□□□□ -0.5
TTC39A-207ENST00000411642 RANBP6O60518 1105 aaKnown RBP11.93□□□□□ -0.5
TTC39A-207ENST00000411642 ALDH1A1P00352 501 aa11.93□□□□□ -0.5
TTC39A-207ENST00000411642 TSPY3P0CV98 308 aa11.93□□□□□ -0.5
TTC39A-207ENST00000411642 TSPY8P0CW00 308 aa11.93□□□□□ -0.5
TTC39A-207ENST00000411642 TFAP4Q01664 338 aa11.93□□□□□ -0.5
TTC39A-207ENST00000411642 DGKZQ13574 1117 aa11.93□□□□□ -0.5
TTC39A-207ENST00000411642 ZYXQ15942 572 aaKnown RBP11.93□□□□□ -0.5
TTC39A-207ENST00000411642 SH3D19Q5HYK7 790 aa11.93□□□□□ -0.5
TTC39A-207ENST00000411642 FAM47AQ5JRC9 791 aa11.93□□□□□ -0.5
TTC39A-207ENST00000411642 RRP12Q5JTH9 1297 aaKnown RBP11.93□□□□□ -0.5
TTC39A-207ENST00000411642 MFSD6Q6ZSS7 791 aa11.93□□□□□ -0.5
TTC39A-207ENST00000411642 FASTKD5Q7L8L6 764 aaKnown RBP11.93□□□□□ -0.5
TTC39A-207ENST00000411642 ACER1Q8TDN7 264 aa11.93□□□□□ -0.5
TTC39A-207ENST00000411642 STAG1Q8WVM7 1258 aa11.93□□□□□ -0.5
TTC39A-207ENST00000411642 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.93□□□□□ -0.5
TTC39A-207ENST00000411642 LSG1Q9H089 658 aaKnown RBP11.93□□□□□ -0.5
TTC39A-207ENST00000411642 RNF41Q9H4P4 317 aaPredicted RBP11.93□□□□□ -0.5
TTC39A-207ENST00000411642 SAGE1Q9NXZ1 904 aa11.93□□□□□ -0.5
TTC39A-207ENST00000411642 TSKSQ9UJT2 592 aa11.93□□□□□ -0.5
TTC39A-207ENST00000411642 GTF3C3Q9Y5Q9 886 aa11.93□□□□□ -0.5
TTC39A-207ENST00000411642 NEDD4P46934 1319 aa11.92□□□□□ -0.5
TTC39A-207ENST00000411642 MGAMO43451 1857 aa11.92□□□□□ -0.5
TTC39A-207ENST00000411642 TSPY2A6NKD2 308 aa11.92□□□□□ -0.5
TTC39A-207ENST00000411642 C19orf81C9J6K1 198 aa11.92□□□□□ -0.5
TTC39A-207ENST00000411642 FGRP09769 529 aa11.92□□□□□ -0.5
TTC39A-207ENST00000411642 PCP11498 1178 aaKnown RBP11.92□□□□□ -0.5
TTC39A-207ENST00000411642 ATP2B2Q01814 1243 aa11.92□□□□□ -0.5
TTC39A-207ENST00000411642 TAF1CQ15572 869 aaPredicted RBP11.92□□□□□ -0.5
TTC39A-207ENST00000411642 GPAT2Q6NUI2 795 aa11.92□□□□□ -0.5
TTC39A-207ENST00000411642 ANKRD23Q86SG2 305 aa11.92□□□□□ -0.5
TTC39A-207ENST00000411642 PROCA1Q8NCQ7 364 aaPredicted RBP11.92□□□□□ -0.5
TTC39A-207ENST00000411642 NEDD1Q8NHV4 660 aa11.92□□□□□ -0.5
TTC39A-207ENST00000411642 MAP4K1Q92918 833 aa11.92□□□□□ -0.5
TTC39A-207ENST00000411642 KIAA1683Q9H0B3 1180 aa11.92□□□□□ -0.5
TTC39A-207ENST00000411642 KANSL2Q9H9L4 492 aa11.92□□□□□ -0.5
TTC39A-207ENST00000411642 ARHGEF10LQ9HCE6 1279 aa11.92□□□□□ -0.5
TTC39A-207ENST00000411642 ZCCHC17Q9NP64 241 aaKnown RBP11.92□□□□□ -0.5
TTC39A-207ENST00000411642 TMOD4Q9NZQ9 345 aa11.92□□□□□ -0.5
TTC39A-207ENST00000411642 AGTPBP1Q9UPW5 1226 aa11.92□□□□□ -0.5
TTC39A-207ENST00000411642 RBM8AQ9Y5S9 174 aaKnown RBP11.92□□□□□ -0.5
TTC39A-207ENST00000411642 RLFQ13129 1914 aa11.92□□□□□ -0.5
TTC39A-207ENST00000411642 COL11A1P12107 1806 aaPredicted RBP11.91□□□□□ -0.5
TTC39A-207ENST00000411642 IGKV6D-41A0A0C4DH26 115 aa11.91□□□□□ -0.5
TTC39A-207ENST00000411642 A0A1W2PRG0 241 aa11.91□□□□□ -0.5
TTC39A-207ENST00000411642 PDHXO00330 501 aa11.91□□□□□ -0.5
TTC39A-207ENST00000411642 TBC1D8O95759 1140 aa11.91□□□□□ -0.5
TTC39A-207ENST00000411642 CYP21A2P08686 494 aa11.91□□□□□ -0.5
TTC39A-207ENST00000411642 EEF2P13639 858 aaKnown RBP11.91□□□□□ -0.5
TTC39A-207ENST00000411642 CTCFP49711 727 aaPredicted RBP11.91□□□□□ -0.5
TTC39A-207ENST00000411642 USP14P54578 494 aa11.91□□□□□ -0.5
TTC39A-207ENST00000411642 CRHR2Q13324 411 aa11.91□□□□□ -0.5
TTC39A-207ENST00000411642 TREML2Q5T2D2 321 aa11.91□□□□□ -0.5
TTC39A-207ENST00000411642 USP17L2Q6R6M4 530 aa11.91□□□□□ -0.5
TTC39A-207ENST00000411642 SIAH1Q8IUQ4 282 aa11.91□□□□□ -0.5
TTC39A-207ENST00000411642 CEP95Q96GE4 821 aa11.91□□□□□ -0.5
TTC39A-207ENST00000411642 SH2D4AQ9H788 454 aa11.91□□□□□ -0.5
TTC39A-207ENST00000411642 EMILIN3Q9NT22 766 aa11.91□□□□□ -0.5
TTC39A-207ENST00000411642 HSPA8P11142 646 aaKnown RBP11.9□□□□□ -0.5
TTC39A-207ENST00000411642 DOCK3Q8IZD9 2030 aa11.9□□□□□ -0.5
TTC39A-207ENST00000411642 ESR2Q92731 530 aa11.9□□□□□ -0.5
TTC39A-207ENST00000411642 C12orf42Q96LP6 360 aa11.9□□□□□ -0.5
TTC39A-207ENST00000411642 CFHR5Q9BXR6 569 aa11.9□□□□□ -0.5
TTC39A-207ENST00000411642 ZFYVE28Q9HCC9 887 aa11.9□□□□□ -0.5
TTC39A-207ENST00000411642 MTMR4Q9NYA4 1195 aa11.9□□□□□ -0.5
TTC39A-207ENST00000411642 TMX2Q9Y320 296 aa11.9□□□□□ -0.5
TTC39A-207ENST00000411642 ZSWIM8A7E2V4 1837 aa11.9□□□□□ -0.5
TTC39A-207ENST00000411642 B4E1Z4 1266 aa11.89□□□□□ -0.51
TTC39A-207ENST00000411642 NMT2O60551 498 aa11.89□□□□□ -0.51
TTC39A-207ENST00000411642 TTLL1O95922 423 aa11.89□□□□□ -0.51
TTC39A-207ENST00000411642 VCAM1P19320 739 aa11.89□□□□□ -0.51
TTC39A-207ENST00000411642 LBX1P52954 281 aa11.89□□□□□ -0.51
TTC39A-207ENST00000411642 PABPC4Q13310 644 aaKnown RBP eCLIP11.89□□□□□ -0.51
TTC39A-207ENST00000411642 NKX2-3Q8TAU0 364 aa11.89□□□□□ -0.51
TTC39A-207ENST00000411642 PARK7Q99497 189 aaKnown RBP11.89□□□□□ -0.51
TTC39A-207ENST00000411642 R3HDMLQ9H3Y0 253 aa11.89□□□□□ -0.51
TTC39A-207ENST00000411642 VCPKMTQ9H867 229 aa11.89□□□□□ -0.51
TTC39A-207ENST00000411642 CNNM2Q9H8M5 875 aa11.89□□□□□ -0.51
TTC39A-207ENST00000411642 NYAP2Q9P242 653 aa11.89□□□□□ -0.51
TTC39A-207ENST00000411642 CLIP2Q9UDT6 1046 aa11.89□□□□□ -0.51
TTC39A-207ENST00000411642 PNMA3Q9UL41 463 aa11.89□□□□□ -0.51
TTC39A-207ENST00000411642 SLC45A1Q9Y2W3 748 aa11.89□□□□□ -0.51
TTC39A-207ENST00000411642 TAF6LQ9Y6J9 622 aa11.89□□□□□ -0.51
TTC39A-207ENST00000411642 MYH6P13533 1939 aa11.88□□□□□ -0.51
TTC39A-207ENST00000411642 RAD21O60216 631 aa11.88□□□□□ -0.51
TTC39A-207ENST00000411642 KDM4AO75164 1064 aa11.88□□□□□ -0.51
TTC39A-207ENST00000411642 REC8O95072 547 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms