RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 TSPYL6Q8N831 410 aa12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 ATP2A3Q93084 1043 aa12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 DDX27Q96GQ7 796 aaKnown RBP12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 ASIC3Q9UHC3 531 aa12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 MAGED2Q9UNF1 606 aaPredicted RBP12.44□□□□□ -0.42
PRPF40A-202ENST00000410080 MAST3O60307 1309 aa12.44□□□□□ -0.42
PRPF40A-202ENST00000410080 B4E1Z4 1266 aa12.44□□□□□ -0.42
PRPF40A-202ENST00000410080 ITGA6P23229 1130 aa12.44□□□□□ -0.42
PRPF40A-202ENST00000410080 VAV2P52735 878 aa12.44□□□□□ -0.42
PRPF40A-202ENST00000410080 DNM3Q9UQ16 869 aa12.44□□□□□ -0.42
PRPF40A-202ENST00000410080 FRMPD2Q68DX3 1309 aaPredicted RBP12.44□□□□□ -0.42
PRPF40A-202ENST00000410080 HOXC9P31274 260 aa12.44□□□□□ -0.42
PRPF40A-202ENST00000410080 ARHGEF6Q15052 776 aa12.44□□□□□ -0.42
PRPF40A-202ENST00000410080 CCDC94Q9BW85 323 aaPredicted RBP12.44□□□□□ -0.42
PRPF40A-202ENST00000410080 VCX3BQ9H321 246 aa12.44□□□□□ -0.42
PRPF40A-202ENST00000410080 AS3MTQ9HBK9 375 aa12.44□□□□□ -0.42
PRPF40A-202ENST00000410080 RPRD2Q5VT52 1461 aaKnown RBP12.44□□□□□ -0.42
PRPF40A-202ENST00000410080 VPS16Q9H269 839 aa12.44□□□□□ -0.42
PRPF40A-202ENST00000410080 KIF21AQ7Z4S6 1674 aa12.44□□□□□ -0.42
PRPF40A-202ENST00000410080 BAG6P46379 1132 aa12.44□□□□□ -0.42
PRPF40A-202ENST00000410080 INPP1P49441 399 aa12.44□□□□□ -0.42
PRPF40A-202ENST00000410080 RBBP5Q15291 538 aaKnown RBP12.44□□□□□ -0.42
PRPF40A-202ENST00000410080 AKT3Q9Y243 479 aa12.44□□□□□ -0.42
PRPF40A-202ENST00000410080 BIVM-ERCC5R4GMW8 1640 aa12.43□□□□□ -0.42
PRPF40A-202ENST00000410080 POLIQ9UNA4 740 aa12.43□□□□□ -0.42
PRPF40A-202ENST00000410080 LUC7L2Q9Y383 392 aaKnown RBP12.43□□□□□ -0.42
PRPF40A-202ENST00000410080 GPATCH8Q9UKJ3 1502 aaKnown RBP12.43□□□□□ -0.42
PRPF40A-202ENST00000410080 RFC1P35251 1148 aaPredicted RBP12.43□□□□□ -0.42
PRPF40A-202ENST00000410080 LACTBP83111 547 aaPredicted RBP12.43□□□□□ -0.42
PRPF40A-202ENST00000410080 NME8Q8N427 588 aa12.43□□□□□ -0.42
PRPF40A-202ENST00000410080 MGARPQ8TDB4 240 aa12.43□□□□□ -0.42
PRPF40A-202ENST00000410080 BCRP11274 1271 aa12.43□□□□□ -0.42
PRPF40A-202ENST00000410080 OTUD7BQ6GQQ9 843 aa12.43□□□□□ -0.42
PRPF40A-202ENST00000410080 DEPTORQ8TB45 409 aa12.43□□□□□ -0.42
PRPF40A-202ENST00000410080 IL16Q14005 1332 aa12.43□□□□□ -0.42
PRPF40A-202ENST00000410080 GCP02774 474 aa12.43□□□□□ -0.42
PRPF40A-202ENST00000410080 ARPP19P56211 112 aa12.43□□□□□ -0.42
PRPF40A-202ENST00000410080 POLR2DO15514 142 aaKnown RBP12.43□□□□□ -0.42
PRPF40A-202ENST00000410080 SLC12A1Q13621 1099 aa12.43□□□□□ -0.42
PRPF40A-202ENST00000410080 MAP7Q14244 749 aa12.43□□□□□ -0.42
PRPF40A-202ENST00000410080 ARHGAP44Q17R89 818 aa12.43□□□□□ -0.42
PRPF40A-202ENST00000410080 TAOK1Q7L7X3 1001 aa12.43□□□□□ -0.42
PRPF40A-202ENST00000410080 ANKRD35Q8N283 1001 aa12.43□□□□□ -0.42
PRPF40A-202ENST00000410080 PUM3Q15397 648 aaKnown RBP12.43□□□□□ -0.42
PRPF40A-202ENST00000410080 CREB3L3Q68CJ9 461 aa12.42□□□□□ -0.42
PRPF40A-202ENST00000410080 DYMQ7RTS9 669 aa12.42□□□□□ -0.42
PRPF40A-202ENST00000410080 SUGCTQ9HAC7 445 aa12.42□□□□□ -0.42
PRPF40A-202ENST00000410080 ZNF518AQ6AHZ1 1483 aa12.42□□□□□ -0.42
PRPF40A-202ENST00000410080 GTF2A1P52655 376 aaPredicted RBP12.42□□□□□ -0.42
PRPF40A-202ENST00000410080 HP1BP3Q5SSJ5 553 aaPredicted RBP12.42□□□□□ -0.42
PRPF40A-202ENST00000410080 PALM2Q8IXS6 379 aa12.42□□□□□ -0.42
PRPF40A-202ENST00000410080 IFNKQ9P0W0 207 aa12.42□□□□□ -0.42
PRPF40A-202ENST00000410080 IQUBQ8NA54 791 aa12.42□□□□□ -0.42
PRPF40A-202ENST00000410080 RBM46Q8TBY0 533 aaKnown RBP12.42□□□□□ -0.42
PRPF40A-202ENST00000410080 RBSNQ9H1K0 784 aa12.42□□□□□ -0.42
PRPF40A-202ENST00000410080 STAM2O75886 525 aa12.42□□□□□ -0.42
PRPF40A-202ENST00000410080 CAPN2P17655 700 aa12.42□□□□□ -0.42
PRPF40A-202ENST00000410080 GBP1P32455 592 aa12.42□□□□□ -0.42
PRPF40A-202ENST00000410080 GCNAQ96QF7 691 aa12.42□□□□□ -0.42
PRPF40A-202ENST00000410080 KRT12Q99456 494 aa12.42□□□□□ -0.42
PRPF40A-202ENST00000410080 CCDC68Q9H2F9 335 aa12.42□□□□□ -0.42
PRPF40A-202ENST00000410080 FAM114A2Q9NRY5 505 aa12.42□□□□□ -0.42
PRPF40A-202ENST00000410080 ZBED2Q9BTP6 218 aa12.42□□□□□ -0.42
PRPF40A-202ENST00000410080 SMYD2Q9NRG4 433 aa12.42□□□□□ -0.42
PRPF40A-202ENST00000410080 KRT3P12035 628 aa12.42□□□□□ -0.42
PRPF40A-202ENST00000410080 PDE6BP35913 854 aa12.42□□□□□ -0.42
PRPF40A-202ENST00000410080 WDR66Q8TBY9 1149 aa12.42□□□□□ -0.42
PRPF40A-202ENST00000410080 PPP4R1Q8TF05 950 aa12.42□□□□□ -0.42
PRPF40A-202ENST00000410080 EYA1Q99502 592 aa12.42□□□□□ -0.42
PRPF40A-202ENST00000410080 POLKQ9UBT6 870 aa12.42□□□□□ -0.42
PRPF40A-202ENST00000410080 FLT4P35916 1363 aa12.42□□□□□ -0.42
PRPF40A-202ENST00000410080 KAZNQ674X7 775 aa12.41□□□□□ -0.42
PRPF40A-202ENST00000410080 PCDHB15Q9Y5E8 787 aa12.41□□□□□ -0.42
PRPF40A-202ENST00000410080 KLHDC4Q8TBB5 520 aa12.41□□□□□ -0.42
PRPF40A-202ENST00000410080 MCUR1Q96AQ8 359 aa12.41□□□□□ -0.42
PRPF40A-202ENST00000410080 PSMB7Q99436 277 aa12.41□□□□□ -0.42
PRPF40A-202ENST00000410080 YTHDC2Q9H6S0 1430 aaKnown RBP12.41□□□□□ -0.42
PRPF40A-202ENST00000410080 ALDH1L1O75891 902 aa12.41□□□□□ -0.42
PRPF40A-202ENST00000410080 DACT1Q9NYF0 836 aa12.41□□□□□ -0.42
PRPF40A-202ENST00000410080 RABGAP1Q9Y3P9 1069 aa12.41□□□□□ -0.42
PRPF40A-202ENST00000410080 GAS7O60861 476 aa12.41□□□□□ -0.42
PRPF40A-202ENST00000410080 S100BP04271 92 aaPredicted RBP12.41□□□□□ -0.42
PRPF40A-202ENST00000410080 AK2P54819 239 aa12.41□□□□□ -0.42
PRPF40A-202ENST00000410080 C19orf44Q9H6X5 657 aa12.41□□□□□ -0.42
PRPF40A-202ENST00000410080 RRP9O43818 475 aaKnown RBP12.41□□□□□ -0.42
PRPF40A-202ENST00000410080 MAPKAPK5Q8IW41 473 aa12.41□□□□□ -0.42
PRPF40A-202ENST00000410080 DCAF5Q96JK2 942 aa12.41□□□□□ -0.42
PRPF40A-202ENST00000410080 ADPGKQ9BRR6 497 aa12.41□□□□□ -0.42
PRPF40A-202ENST00000410080 ACTN4O43707 911 aaKnown RBP12.41□□□□□ -0.42
PRPF40A-202ENST00000410080 ZHX1Q9UKY1 873 aaPredicted RBP12.41□□□□□ -0.42
PRPF40A-202ENST00000410080 EXOC3O60645 756 aa12.41□□□□□ -0.42
PRPF40A-202ENST00000410080 LIG4P49917 911 aa12.41□□□□□ -0.42
PRPF40A-202ENST00000410080 HVCN1Q96D96 273 aa12.41□□□□□ -0.42
PRPF40A-202ENST00000410080 IPO11Q9UI26 975 aaKnown RBP12.41□□□□□ -0.42
PRPF40A-202ENST00000410080 MOSPD1Q9UJG1 213 aa12.41□□□□□ -0.42
PRPF40A-202ENST00000410080 STK24Q9Y6E0 443 aa12.41□□□□□ -0.42
PRPF40A-202ENST00000410080 ECE1P42892 770 aa12.4□□□□□ -0.42
PRPF40A-202ENST00000410080 CYP2J2P51589 502 aa12.4□□□□□ -0.42
PRPF40A-202ENST00000410080 DOK7Q18PE1 504 aa12.4□□□□□ -0.42
PRPF40A-202ENST00000410080 CNGA4Q8IV77 575 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms