RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 EAPPQ56P03 285 aaPredicted RBP16.55■□□□□ 0.24
MINDY4-202ENST00000409881 TAF1DQ9H5J8 278 aaPredicted RBP16.55■□□□□ 0.24
MINDY4-202ENST00000409881 ANAPC4Q9UJX5 808 aa16.55■□□□□ 0.24
MINDY4-202ENST00000409881 WDR90Q96KV7 1748 aa16.55■□□□□ 0.24
MINDY4-202ENST00000409881 POTECB2RU33 542 aa16.55■□□□□ 0.24
MINDY4-202ENST00000409881 HLA-DOAP06340 250 aa16.55■□□□□ 0.24
MINDY4-202ENST00000409881 CASTP20810 708 aaKnown RBP16.55■□□□□ 0.24
MINDY4-202ENST00000409881 TNFAIP1Q13829 316 aa16.55■□□□□ 0.24
MINDY4-202ENST00000409881 AKNAD1Q5T1N1 836 aa16.55■□□□□ 0.24
MINDY4-202ENST00000409881 MFSD6Q6ZSS7 791 aa16.55■□□□□ 0.24
MINDY4-202ENST00000409881 SH3BP5LQ7L8J4 393 aa16.55■□□□□ 0.24
MINDY4-202ENST00000409881 FAM151AQ8WW52 585 aa16.55■□□□□ 0.24
MINDY4-202ENST00000409881 TMEM39BQ9GZU3 492 aa16.55■□□□□ 0.24
MINDY4-202ENST00000409881 LIMCH1Q9UPQ0 1083 aa16.55■□□□□ 0.24
MINDY4-202ENST00000409881 NEDD4P46934 1319 aa16.54■□□□□ 0.24
MINDY4-202ENST00000409881 RASA3Q14644 834 aa16.54■□□□□ 0.24
MINDY4-202ENST00000409881 RRP12Q5JTH9 1297 aaKnown RBP16.54■□□□□ 0.24
MINDY4-202ENST00000409881 TAF3Q5VWG9 929 aa16.54■□□□□ 0.24
MINDY4-202ENST00000409881 USP50Q70EL3 339 aaPredicted RBP16.54■□□□□ 0.24
MINDY4-202ENST00000409881 FAM200AQ8TCP9 573 aa16.54■□□□□ 0.24
MINDY4-202ENST00000409881 DHX36Q9H2U1 1008 aaKnown RBP16.54■□□□□ 0.24
MINDY4-202ENST00000409881 DDX41Q9UJV9 622 aaKnown RBP16.54■□□□□ 0.24
MINDY4-202ENST00000409881 TACC3Q9Y6A5 838 aa16.54■□□□□ 0.24
MINDY4-202ENST00000409881 PRDM1O75626 825 aa16.54■□□□□ 0.24
MINDY4-202ENST00000409881 SLFN14P0C7P3 912 aa16.54■□□□□ 0.24
MINDY4-202ENST00000409881 GJB2P29033 226 aa16.54■□□□□ 0.24
MINDY4-202ENST00000409881 TRDNQ13061 729 aa16.54■□□□□ 0.24
MINDY4-202ENST00000409881 FAM83AQ86UY5 434 aa16.54■□□□□ 0.24
MINDY4-202ENST00000409881 APOBEC3FQ8IUX4 373 aaKnown RBP16.54■□□□□ 0.24
MINDY4-202ENST00000409881 CCDC83Q8IWF9 413 aa16.54■□□□□ 0.24
MINDY4-202ENST00000409881 STAG1Q8WVM7 1258 aa16.54■□□□□ 0.24
MINDY4-202ENST00000409881 NEK1Q96PY6 1258 aa16.54■□□□□ 0.24
MINDY4-202ENST00000409881 RNF41Q9H4P4 317 aaPredicted RBP16.54■□□□□ 0.24
MINDY4-202ENST00000409881 MTMR6Q9Y217 621 aa16.54■□□□□ 0.24
MINDY4-202ENST00000409881 SCN4AP35499 1836 aa16.53■□□□□ 0.24
MINDY4-202ENST00000409881 PSMA5P28066 241 aa16.53■□□□□ 0.24
MINDY4-202ENST00000409881 GABPB1Q06547 395 aaPredicted RBP16.53■□□□□ 0.24
MINDY4-202ENST00000409881 RALYLQ86SE5 291 aaKnown RBP16.53■□□□□ 0.24
MINDY4-202ENST00000409881 SLC44A5Q8NCS7 719 aa16.53■□□□□ 0.24
MINDY4-202ENST00000409881 CSRNP1Q96S65 589 aa16.53■□□□□ 0.24
MINDY4-202ENST00000409881 RRAGCQ9HB90 399 aa16.53■□□□□ 0.24
MINDY4-202ENST00000409881 MRVI1Q9Y6F6 885 aa16.53■□□□□ 0.24
MINDY4-202ENST00000409881 VPS37CA5D8V6 355 aaPredicted RBP16.53■□□□□ 0.24
MINDY4-202ENST00000409881 COL9A3Q14050 684 aaPredicted RBP16.53■□□□□ 0.24
MINDY4-202ENST00000409881 CDAN1Q8IWY9 1227 aa16.53■□□□□ 0.24
MINDY4-202ENST00000409881 NCOA7Q8NI08 942 aa16.53■□□□□ 0.24
MINDY4-202ENST00000409881 DEFB129Q9H1M3 183 aa16.53■□□□□ 0.24
MINDY4-202ENST00000409881 ATRNL1Q5VV63 1379 aa16.52■□□□□ 0.24
MINDY4-202ENST00000409881 ROBO3Q96MS0 1386 aa16.52■□□□□ 0.24
MINDY4-202ENST00000409881 B4E1Z4 1266 aa16.52■□□□□ 0.24
MINDY4-202ENST00000409881 TYRO3Q06418 890 aa16.52■□□□□ 0.24
MINDY4-202ENST00000409881 PDE4BQ07343 736 aa16.52■□□□□ 0.24
MINDY4-202ENST00000409881 SYCP1Q15431 976 aa16.52■□□□□ 0.24
MINDY4-202ENST00000409881 BLOC1S2Q6QNY1 142 aa16.52■□□□□ 0.24
MINDY4-202ENST00000409881 CRACR2BQ8N4Y2 399 aaPredicted RBP16.52■□□□□ 0.24
MINDY4-202ENST00000409881 CCDC112Q8NEF3 446 aa16.52■□□□□ 0.24
MINDY4-202ENST00000409881 PI4KBQ9UBF8 816 aa16.52■□□□□ 0.24
MINDY4-202ENST00000409881 SERPINB13Q9UIV8 391 aa16.52■□□□□ 0.24
MINDY4-202ENST00000409881 COL2A1P02458 1487 aaPredicted RBP16.52■□□□□ 0.23
MINDY4-202ENST00000409881 SLURP2P0DP57 97 aa16.52■□□□□ 0.23
MINDY4-202ENST00000409881 CKAP2LQ8IYA6 745 aa16.52■□□□□ 0.23
MINDY4-202ENST00000409881 ZNF592Q92610 1267 aa16.52■□□□□ 0.23
MINDY4-202ENST00000409881 DCPSQ96C86 337 aaKnown RBP16.52■□□□□ 0.23
MINDY4-202ENST00000409881 TRIM34Q9BYJ4 488 aa16.52■□□□□ 0.23
MINDY4-202ENST00000409881 FAM196BA6NMK8 535 aa16.51■□□□□ 0.23
MINDY4-202ENST00000409881 LIG1P18858 919 aa16.51■□□□□ 0.23
MINDY4-202ENST00000409881 MAP3K11Q16584 847 aa16.51■□□□□ 0.23
MINDY4-202ENST00000409881 PNMA8AQ86V59 439 aaPredicted RBP16.51■□□□□ 0.23
MINDY4-202ENST00000409881 TM6SF1Q9BZW5 370 aa16.51■□□□□ 0.23
MINDY4-202ENST00000409881 CNNM2Q9H8M5 875 aa16.51■□□□□ 0.23
MINDY4-202ENST00000409881 MKNK2Q9HBH9 465 aa16.51■□□□□ 0.23
MINDY4-202ENST00000409881 CYP46A1Q9Y6A2 500 aa16.51■□□□□ 0.23
MINDY4-202ENST00000409881 VEGFAP15692 232 aaPredicted RBP16.51■□□□□ 0.23
MINDY4-202ENST00000409881 TPD52L1Q16890 204 aaPredicted RBP16.51■□□□□ 0.23
MINDY4-202ENST00000409881 C16orf86Q6ZW13 317 aa16.51■□□□□ 0.23
MINDY4-202ENST00000409881 KIF18AQ8NI77 898 aa16.51■□□□□ 0.23
MINDY4-202ENST00000409881 NKX2-3Q8TAU0 364 aa16.51■□□□□ 0.23
MINDY4-202ENST00000409881 TCEANC2Q96MN5 208 aa16.51■□□□□ 0.23
MINDY4-202ENST00000409881 TRIM5Q9C035 493 aa16.51■□□□□ 0.23
MINDY4-202ENST00000409881 KRT23Q9C075 422 aa16.51■□□□□ 0.23
MINDY4-202ENST00000409881 CBX8Q9HC52 389 aa16.51■□□□□ 0.23
MINDY4-202ENST00000409881 ZSWIM6Q9HCJ5 1215 aa16.51■□□□□ 0.23
MINDY4-202ENST00000409881 NMRK2Q9NPI5 230 aa16.51■□□□□ 0.23
MINDY4-202ENST00000409881 CLEC11AQ9Y240 323 aa16.51■□□□□ 0.23
MINDY4-202ENST00000409881 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.51■□□□□ 0.23
MINDY4-202ENST00000409881 PITPNM2Q9BZ72 1349 aa16.5■□□□□ 0.23
MINDY4-202ENST00000409881 RANBP6O60518 1105 aaKnown RBP16.5■□□□□ 0.23
MINDY4-202ENST00000409881 CDK8P49336 464 aa16.5■□□□□ 0.23
MINDY4-202ENST00000409881 ANO6Q4KMQ2 910 aa16.5■□□□□ 0.23
MINDY4-202ENST00000409881 CHST3Q7LGC8 479 aa16.5■□□□□ 0.23
MINDY4-202ENST00000409881 NUP62CLQ9H1M0 184 aa16.5■□□□□ 0.23
MINDY4-202ENST00000409881 EHD4Q9H223 541 aa16.5■□□□□ 0.23
MINDY4-202ENST00000409881 MORC2Q9Y6X9 1032 aaPredicted RBP16.5■□□□□ 0.23
MINDY4-202ENST00000409881 PCP11498 1178 aaKnown RBP16.5■□□□□ 0.23
MINDY4-202ENST00000409881 PRAMEF18Q5VWM3 479 aa16.5■□□□□ 0.23
MINDY4-202ENST00000409881 SULF1Q8IWU6 871 aa16.5■□□□□ 0.23
MINDY4-202ENST00000409881 MB21D2Q8IYB1 491 aaPredicted RBP16.5■□□□□ 0.23
MINDY4-202ENST00000409881 ZNF287Q9HBT7 754 aa16.5■□□□□ 0.23
MINDY4-202ENST00000409881 ORC4O43929 436 aa16.49■□□□□ 0.23
MINDY4-202ENST00000409881 HMGB1P09429 215 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms