RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 AKR1B1P15121 316 aa16.68■□□□□ 0.26
GYPC-203ENST00000409836 RUFY2Q8WXA3 655 aa16.68■□□□□ 0.26
GYPC-203ENST00000409836 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.68■□□□□ 0.26
GYPC-203ENST00000409836 CABP5Q9NP86 173 aa16.68■□□□□ 0.26
GYPC-203ENST00000409836 SYNPO2Q9UMS6 1093 aa16.68■□□□□ 0.26
GYPC-203ENST00000409836 HTTP42858 3142 aa16.67■□□□□ 0.26
GYPC-203ENST00000409836 USP17L10C9JJH3 530 aa16.67■□□□□ 0.26
GYPC-203ENST00000409836 LBX1P52954 281 aa16.67■□□□□ 0.26
GYPC-203ENST00000409836 MTMR2Q13614 643 aa16.67■□□□□ 0.26
GYPC-203ENST00000409836 NBPF3Q9H094 633 aa16.67■□□□□ 0.26
GYPC-203ENST00000409836 MGAMO43451 1857 aa16.67■□□□□ 0.26
GYPC-203ENST00000409836 PDHXO00330 501 aa16.66■□□□□ 0.26
GYPC-203ENST00000409836 TLR2O60603 784 aa16.66■□□□□ 0.26
GYPC-203ENST00000409836 SLC3A2P08195 630 aaKnown RBP16.66■□□□□ 0.26
GYPC-203ENST00000409836 HOXA7P31268 230 aaPredicted RBP16.66■□□□□ 0.26
GYPC-203ENST00000409836 HMGCS2P54868 508 aa16.66■□□□□ 0.26
GYPC-203ENST00000409836 PDE4BQ07343 736 aa16.66■□□□□ 0.26
GYPC-203ENST00000409836 SEPT2Q15019 361 aa16.66■□□□□ 0.26
GYPC-203ENST00000409836 TAF1CQ15572 869 aaPredicted RBP16.66■□□□□ 0.26
GYPC-203ENST00000409836 SKAP1Q86WV1 359 aa16.66■□□□□ 0.26
GYPC-203ENST00000409836 SIAH1Q8IUQ4 282 aa16.66■□□□□ 0.26
GYPC-203ENST00000409836 PARK7Q99497 189 aaKnown RBP16.66■□□□□ 0.26
GYPC-203ENST00000409836 R3HDMLQ9H3Y0 253 aa16.66■□□□□ 0.26
GYPC-203ENST00000409836 MINDY4BA8MYZ0 360 aa16.65■□□□□ 0.26
GYPC-203ENST00000409836 GPR25O00155 361 aa16.65■□□□□ 0.26
GYPC-203ENST00000409836 NOVP48745 357 aa16.65■□□□□ 0.26
GYPC-203ENST00000409836 USP14P54578 494 aa16.65■□□□□ 0.26
GYPC-203ENST00000409836 ICA1Q05084 483 aa16.65■□□□□ 0.26
GYPC-203ENST00000409836 STAG1Q8WVM7 1258 aa16.65■□□□□ 0.26
GYPC-203ENST00000409836 KANSL2Q9H9L4 492 aa16.65■□□□□ 0.26
GYPC-203ENST00000409836 ZFYVE28Q9HCC9 887 aa16.65■□□□□ 0.26
GYPC-203ENST00000409836 EMILIN3Q9NT22 766 aa16.65■□□□□ 0.26
GYPC-203ENST00000409836 TSKSQ9UJT2 592 aa16.65■□□□□ 0.26
GYPC-203ENST00000409836 TMX2Q9Y320 296 aa16.65■□□□□ 0.26
GYPC-203ENST00000409836 A0A1W2PRG0 241 aa16.64■□□□□ 0.25
GYPC-203ENST00000409836 TBC1D8O95759 1140 aa16.64■□□□□ 0.25
GYPC-203ENST00000409836 RAB3GAP1Q15042 981 aa16.64■□□□□ 0.25
GYPC-203ENST00000409836 TREML2Q5T2D2 321 aa16.64■□□□□ 0.25
GYPC-203ENST00000409836 USP17L2Q6R6M4 530 aa16.64■□□□□ 0.25
GYPC-203ENST00000409836 NEDD1Q8NHV4 660 aa16.64■□□□□ 0.25
GYPC-203ENST00000409836 LPAR1Q92633 364 aa16.64■□□□□ 0.25
GYPC-203ENST00000409836 SH2D4AQ9H788 454 aa16.64■□□□□ 0.25
GYPC-203ENST00000409836 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.64■□□□□ 0.25
GYPC-203ENST00000409836 PNMA3Q9UL41 463 aa16.64■□□□□ 0.25
GYPC-203ENST00000409836 TACC3Q9Y6A5 838 aa16.64■□□□□ 0.25
GYPC-203ENST00000409836 ZSWIM8A7E2V4 1837 aa16.63■□□□□ 0.25
GYPC-203ENST00000409836 PABPC4Q13310 644 aaKnown RBP eCLIP16.63■□□□□ 0.255e-10■■■■■ 32.8
GYPC-203ENST00000409836 C17orf99Q6UX52 265 aa16.63■□□□□ 0.25
GYPC-203ENST00000409836 ACER1Q8TDN7 264 aa16.63■□□□□ 0.25
GYPC-203ENST00000409836 ZNF296Q8WUU4 475 aaPredicted RBP16.63■□□□□ 0.25
GYPC-203ENST00000409836 MKNK2Q9HBH9 465 aa16.63■□□□□ 0.25
GYPC-203ENST00000409836 TMOD4Q9NZQ9 345 aa16.63■□□□□ 0.25
GYPC-203ENST00000409836 NYAP2Q9P242 653 aa16.63■□□□□ 0.25
GYPC-203ENST00000409836 BCRP11274 1271 aa16.62■□□□□ 0.25
GYPC-203ENST00000409836 VCAM1P19320 739 aa16.62■□□□□ 0.25
GYPC-203ENST00000409836 LBX2Q6XYB7 198 aa16.62■□□□□ 0.25
GYPC-203ENST00000409836 GADL1Q6ZQY3 521 aa16.62■□□□□ 0.25
GYPC-203ENST00000409836 TBC1D10CQ8IV04 446 aa16.62■□□□□ 0.25
GYPC-203ENST00000409836 ESYT1Q9BSJ8 1104 aa16.62■□□□□ 0.25
GYPC-203ENST00000409836 ARHGEF10LQ9HCE6 1279 aa16.62■□□□□ 0.25
GYPC-203ENST00000409836 CTNNA3Q9UI47 895 aa16.62■□□□□ 0.25
GYPC-203ENST00000409836 MPHOSPH10O00566 681 aaKnown RBP16.61■□□□□ 0.25
GYPC-203ENST00000409836 FKTNO75072 461 aa16.61■□□□□ 0.25
GYPC-203ENST00000409836 CTDSPL2Q05D32 466 aa16.61■□□□□ 0.25
GYPC-203ENST00000409836 PPP4R3BQ5MIZ7 849 aa16.61■□□□□ 0.25
GYPC-203ENST00000409836 AKNAD1Q5T1N1 836 aa16.61■□□□□ 0.25
GYPC-203ENST00000409836 CLEC10AQ8IUN9 316 aa16.61■□□□□ 0.25
GYPC-203ENST00000409836 MKL1Q969V6 931 aa16.61■□□□□ 0.25
GYPC-203ENST00000409836 FEZ1Q99689 392 aa16.61■□□□□ 0.25
GYPC-203ENST00000409836 RNF41Q9H4P4 317 aaPredicted RBP16.61■□□□□ 0.25
GYPC-203ENST00000409836 VCPKMTQ9H867 229 aa16.61■□□□□ 0.25
GYPC-203ENST00000409836 MTMR4Q9NYA4 1195 aa16.61■□□□□ 0.25
GYPC-203ENST00000409836 CDC45O75419 566 aa16.6■□□□□ 0.25
GYPC-203ENST00000409836 PRDM1O75626 825 aa16.6■□□□□ 0.25
GYPC-203ENST00000409836 EEF2P13639 858 aaKnown RBP16.6■□□□□ 0.25
GYPC-203ENST00000409836 GCLCP48506 637 aaPredicted RBP16.6■□□□□ 0.25
GYPC-203ENST00000409836 DGKZQ13574 1117 aa16.6■□□□□ 0.25
GYPC-203ENST00000409836 FAM110CQ1W6H9 321 aa16.6■□□□□ 0.25
GYPC-203ENST00000409836 ZNF444Q8N0Y2 327 aaPredicted RBP16.6■□□□□ 0.25
GYPC-203ENST00000409836 GTF3C2Q8WUA4 911 aaPredicted RBP16.6■□□□□ 0.25
GYPC-203ENST00000409836 MAP4K1Q92918 833 aa16.6■□□□□ 0.25
GYPC-203ENST00000409836 CEP95Q96GE4 821 aa16.6■□□□□ 0.25
GYPC-203ENST00000409836 ASCC2Q9H1I8 757 aaPredicted RBP16.6■□□□□ 0.25
GYPC-203ENST00000409836 TCP11L1Q9NUJ3 509 aa16.6■□□□□ 0.25
GYPC-203ENST00000409836 MORF4L1Q9UBU8 362 aa16.6■□□□□ 0.25
GYPC-203ENST00000409836 ZNF236Q9UL36 1845 aa16.6■□□□□ 0.25
GYPC-203ENST00000409836 MYPNQ86TC9 1320 aa16.6■□□□□ 0.25
GYPC-203ENST00000409836 COL11A1P12107 1806 aaPredicted RBP16.59■□□□□ 0.25
GYPC-203ENST00000409836 CYP2C8P10632 490 aa16.59■□□□□ 0.25
GYPC-203ENST00000409836 IMMTQ16891 758 aaKnown RBP16.59■□□□□ 0.25
GYPC-203ENST00000409836 COL13A1Q5TAT6 717 aaPredicted RBP16.59■□□□□ 0.25
GYPC-203ENST00000409836 ERO1AQ96HE7 468 aa16.59■□□□□ 0.25
GYPC-203ENST00000409836 U3KPZ7 1027 aaPredicted RBP16.59■□□□□ 0.25
GYPC-203ENST00000409836 NEDD4P46934 1319 aa16.59■□□□□ 0.25
GYPC-203ENST00000409836 ZNF213O14771 459 aa16.58■□□□□ 0.24
GYPC-203ENST00000409836 WDR46O15213 610 aaKnown RBP16.58■□□□□ 0.24
GYPC-203ENST00000409836 TTLL1O95922 423 aa16.58■□□□□ 0.24
GYPC-203ENST00000409836 TSPY3P0CV98 308 aa16.58■□□□□ 0.24
GYPC-203ENST00000409836 TSPY8P0CW00 308 aa16.58■□□□□ 0.24
GYPC-203ENST00000409836 LACTBP83111 547 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms