RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 FAM160A1Q05DH4 1040 aa6.93□□□□□ -1.3
CLK1-202ENST00000409403 FBXL19Q6PCT2 694 aa6.93□□□□□ -1.3
CLK1-202ENST00000409403 WFDC8Q8IUA0 241 aa6.93□□□□□ -1.3
CLK1-202ENST00000409403 WNT8BQ93098 351 aa6.93□□□□□ -1.3
CLK1-202ENST00000409403 SPATA32Q96LK8 384 aa6.93□□□□□ -1.3
CLK1-202ENST00000409403 PRDM6Q9NQX0 595 aa6.93□□□□□ -1.3
CLK1-202ENST00000409403 CYP8B1Q9UNU6 501 aa6.93□□□□□ -1.3
CLK1-202ENST00000409403 ADCY9O60503 1353 aa6.92□□□□□ -1.3
CLK1-202ENST00000409403 EHBP1L1Q8N3D4 1523 aa6.92□□□□□ -1.3
CLK1-202ENST00000409403 NOS1P29475 1434 aa6.92□□□□□ -1.3
CLK1-202ENST00000409403 SHISA8B8ZZ34 492 aa6.92□□□□□ -1.3
CLK1-202ENST00000409403 AMPD1P23109 780 aa6.92□□□□□ -1.3
CLK1-202ENST00000409403 ARNTP27540 789 aa6.92□□□□□ -1.3
CLK1-202ENST00000409403 ARL4DP49703 201 aa6.92□□□□□ -1.3
CLK1-202ENST00000409403 CALD1Q05682 793 aaKnown RBP6.92□□□□□ -1.3
CLK1-202ENST00000409403 AP3B2Q13367 1082 aa6.92□□□□□ -1.3
CLK1-202ENST00000409403 LRRC14Q15048 493 aa6.92□□□□□ -1.3
CLK1-202ENST00000409403 VPS72Q15906 364 aa6.92□□□□□ -1.3
CLK1-202ENST00000409403 SNAP47Q5SQN1 464 aa6.92□□□□□ -1.3
CLK1-202ENST00000409403 TXNDC11Q6PKC3 985 aa6.92□□□□□ -1.3
CLK1-202ENST00000409403 C8orf86Q6ZUL3 223 aa6.92□□□□□ -1.3
CLK1-202ENST00000409403 TRIM42Q8IWZ5 723 aa6.92□□□□□ -1.3
CLK1-202ENST00000409403 ZSCAN1Q8NBB4 408 aa6.92□□□□□ -1.3
CLK1-202ENST00000409403 GOLM1Q8NBJ4 401 aa6.92□□□□□ -1.3
CLK1-202ENST00000409403 RASGRP4Q8TDF6 673 aa6.92□□□□□ -1.3
CLK1-202ENST00000409403 SLC7A3Q8WY07 619 aa6.92□□□□□ -1.3
CLK1-202ENST00000409403 UBXN4Q92575 508 aa6.92□□□□□ -1.3
CLK1-202ENST00000409403 NAP1L5Q96NT1 182 aaPredicted RBP6.92□□□□□ -1.3
CLK1-202ENST00000409403 EMILIN2Q9BXX0 1053 aa6.92□□□□□ -1.3
CLK1-202ENST00000409403 PTPRUQ92729 1446 aa6.91□□□□□ -1.3
CLK1-202ENST00000409403 ADGRL3Q9HAR2 1447 aa6.91□□□□□ -1.3
CLK1-202ENST00000409403 LINC01387J3KSC0 135 aa6.91□□□□□ -1.3
CLK1-202ENST00000409403 TPM2P07951 284 aa6.91□□□□□ -1.3
CLK1-202ENST00000409403 GARTP22102 1010 aa6.91□□□□□ -1.3
CLK1-202ENST00000409403 C19orf57Q0VDD7 668 aa6.91□□□□□ -1.3
CLK1-202ENST00000409403 MSL1Q68DK7 614 aa6.91□□□□□ -1.3
CLK1-202ENST00000409403 NT5C1AQ9BXI3 368 aa6.91□□□□□ -1.3
CLK1-202ENST00000409403 NEXMIFQ5QGS0 1516 aa6.91□□□□□ -1.3
CLK1-202ENST00000409403 PLEKHG1Q9ULL1 1385 aa6.91□□□□□ -1.3
CLK1-202ENST00000409403 TNRC18O15417 2968 aaPredicted RBP6.91□□□□□ -1.3
CLK1-202ENST00000409403 C1orf167Q5SNV9 1468 aa6.91□□□□□ -1.3
CLK1-202ENST00000409403 GREM1O60565 184 aa6.9□□□□□ -1.3
CLK1-202ENST00000409403 CELA2BP08218 269 aaPredicted RBP6.9□□□□□ -1.3
CLK1-202ENST00000409403 ATF4P18848 351 aaPredicted RBP6.9□□□□□ -1.3
CLK1-202ENST00000409403 NCLP19338 710 aaKnown RBP6.9□□□□□ -1.3
CLK1-202ENST00000409403 ATP2B1P20020 1258 aa6.9□□□□□ -1.3
CLK1-202ENST00000409403 GSTM4Q03013 218 aa6.9□□□□□ -1.3
CLK1-202ENST00000409403 RASIP1Q5U651 963 aa6.9□□□□□ -1.3
CLK1-202ENST00000409403 LLGL2Q6P1M3 1020 aa6.9□□□□□ -1.3
CLK1-202ENST00000409403 CCDC84Q86UT8 332 aaPredicted RBP6.9□□□□□ -1.3
CLK1-202ENST00000409403 STK35Q8TDR2 534 aa6.9□□□□□ -1.3
CLK1-202ENST00000409403 EAF1Q96JC9 268 aaPredicted RBP6.9□□□□□ -1.3
CLK1-202ENST00000409403 MIR1-1HGQ9H1L0 117 aa6.9□□□□□ -1.3
CLK1-202ENST00000409403 CBX8Q9HC52 389 aa6.9□□□□□ -1.3
CLK1-202ENST00000409403 OSGEPQ9NPF4 335 aa6.9□□□□□ -1.3
CLK1-202ENST00000409403 ABCC5O15440 1437 aa6.9□□□□□ -1.3
CLK1-202ENST00000409403 ARHGEF28Q8N1W1 1705 aaKnown RBP6.9□□□□□ -1.31
CLK1-202ENST00000409403 FAM181BA6NEQ2 426 aa6.9□□□□□ -1.31
CLK1-202ENST00000409403 FSCN2O14926 492 aa6.9□□□□□ -1.31
CLK1-202ENST00000409403 HGSNATQ68CP4 663 aa6.9□□□□□ -1.31
CLK1-202ENST00000409403 LYPD4Q6UWN0 246 aa6.9□□□□□ -1.31
CLK1-202ENST00000409403 PDCL3Q9H2J4 239 aa6.9□□□□□ -1.31
CLK1-202ENST00000409403 PCDHB5Q9Y5E4 795 aa6.9□□□□□ -1.31
CLK1-202ENST00000409403 MAP3K5Q99683 1374 aa6.9□□□□□ -1.31
CLK1-202ENST00000409403 PXDNQ92626 1479 aa6.9□□□□□ -1.31
CLK1-202ENST00000409403 ZFYVE9O95405 1425 aa6.89□□□□□ -1.31
CLK1-202ENST00000409403 ADAMTS13Q76LX8 1427 aa6.89□□□□□ -1.31
CLK1-202ENST00000409403 EIF2AK4Q9P2K8 1649 aaKnown RBP6.89□□□□□ -1.31
CLK1-202ENST00000409403 RPRD2Q5VT52 1461 aaKnown RBP6.89□□□□□ -1.31
CLK1-202ENST00000409403 CYP11A1P05108 521 aa6.89□□□□□ -1.31
CLK1-202ENST00000409403 GSTP1P09211 210 aaKnown RBP6.89□□□□□ -1.31
CLK1-202ENST00000409403 ZNF252P-AS1Q0IIN9 211 aa6.89□□□□□ -1.31
CLK1-202ENST00000409403 SCARA3Q6AZY7 606 aa6.89□□□□□ -1.31
CLK1-202ENST00000409403 FAM196AQ6ZSG2 479 aa6.89□□□□□ -1.31
CLK1-202ENST00000409403 GRIN3AQ8TCU5 1115 aa6.89□□□□□ -1.31
CLK1-202ENST00000409403 SEC16BQ96JE7 1060 aa6.89□□□□□ -1.31
CLK1-202ENST00000409403 MAP7D2Q96T17 732 aa6.89□□□□□ -1.31
CLK1-202ENST00000409403 MBD5Q9P267 1494 aa6.88□□□□□ -1.31
CLK1-202ENST00000409403 ROBO2Q9HCK4 1378 aa6.88□□□□□ -1.31
CLK1-202ENST00000409403 F13A1P00488 732 aa6.88□□□□□ -1.31
CLK1-202ENST00000409403 FGRP09769 529 aa6.88□□□□□ -1.31
CLK1-202ENST00000409403 NID1P14543 1247 aa6.88□□□□□ -1.31
CLK1-202ENST00000409403 APOBRQ0VD83 1088 aa6.88□□□□□ -1.31
CLK1-202ENST00000409403 BNC2Q6ZN30 1099 aaPredicted RBP6.88□□□□□ -1.31
CLK1-202ENST00000409403 PDZD3Q86UT5 571 aa6.88□□□□□ -1.31
CLK1-202ENST00000409403 MAP4K3Q8IVH8 894 aa6.88□□□□□ -1.31
CLK1-202ENST00000409403 KLHL23Q8NBE8 558 aa6.88□□□□□ -1.31
CLK1-202ENST00000409403 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.88□□□□□ -1.318e-10■■□□□ 13.9
CLK1-202ENST00000409403 CARD10Q9BWT7 1032 aa6.88□□□□□ -1.31
CLK1-202ENST00000409403 UBP1Q9NZI7 540 aa6.88□□□□□ -1.31
CLK1-202ENST00000409403 DGKGP49619 791 aa6.87□□□□□ -1.31
CLK1-202ENST00000409403 COL9A3Q14050 684 aaPredicted RBP6.87□□□□□ -1.31
CLK1-202ENST00000409403 SEPT6Q14141 434 aa6.87□□□□□ -1.31
CLK1-202ENST00000409403 SETDB1Q15047 1291 aa6.87□□□□□ -1.31
CLK1-202ENST00000409403 MCF2L2Q86YR7 1114 aa6.87□□□□□ -1.31
CLK1-202ENST00000409403 DMRTC2Q8IXT2 367 aaPredicted RBP6.87□□□□□ -1.31
CLK1-202ENST00000409403 GATAD2BQ8WXI9 593 aa6.87□□□□□ -1.31
CLK1-202ENST00000409403 JARID2Q92833 1246 aaPredicted RBP6.87□□□□□ -1.31
CLK1-202ENST00000409403 GAL3ST3Q96A11 431 aa6.87□□□□□ -1.31
CLK1-202ENST00000409403 ARMC5Q96C12 935 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms