RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 MAP3K11Q16584 847 aa16.61■□□□□ 0.25
CHRNA1-204ENST00000409323 TMEM179Q6ZVK1 233 aa16.61■□□□□ 0.25
CHRNA1-204ENST00000409323 RUFY3Q7L099 469 aa16.61■□□□□ 0.25
CHRNA1-204ENST00000409323 DHX32Q7L7V1 743 aaKnown RBP16.61■□□□□ 0.25
CHRNA1-204ENST00000409323 RASGRP2Q7LDG7 609 aa16.61■□□□□ 0.25
CHRNA1-204ENST00000409323 RAB11FIP4Q86YS3 637 aa16.61■□□□□ 0.25
CHRNA1-204ENST00000409323 ANKRD13AQ8IZ07 590 aa16.61■□□□□ 0.25
CHRNA1-204ENST00000409323 LRRC47Q8N1G4 583 aaKnown RBP16.61■□□□□ 0.25
CHRNA1-204ENST00000409323 ACER1Q8TDN7 264 aa16.61■□□□□ 0.25
CHRNA1-204ENST00000409323 OTUD5Q96G74 571 aa16.61■□□□□ 0.25
CHRNA1-204ENST00000409323 ZSWIM6Q9HCJ5 1215 aa16.61■□□□□ 0.25
CHRNA1-204ENST00000409323 STX8Q9UNK0 236 aa16.61■□□□□ 0.25
CHRNA1-204ENST00000409323 CYP46A1Q9Y6A2 500 aa16.61■□□□□ 0.25
CHRNA1-204ENST00000409323 PHIPQ8WWQ0 1821 aa16.6■□□□□ 0.25
CHRNA1-204ENST00000409323 RAD21O60216 631 aa16.6■□□□□ 0.25
CHRNA1-204ENST00000409323 ASNSP08243 561 aa16.6■□□□□ 0.25
CHRNA1-204ENST00000409323 EEF2P13639 858 aaKnown RBP16.6■□□□□ 0.25
CHRNA1-204ENST00000409323 NEK4P51957 841 aa16.6■□□□□ 0.25
CHRNA1-204ENST00000409323 EXOSC10Q01780 885 aaKnown RBP16.6■□□□□ 0.25
CHRNA1-204ENST00000409323 GRM1Q13255 1194 aa16.6■□□□□ 0.25
CHRNA1-204ENST00000409323 TMEM67Q5HYA8 995 aa16.6■□□□□ 0.25
CHRNA1-204ENST00000409323 LDLRAD1Q5T700 205 aa16.6■□□□□ 0.25
CHRNA1-204ENST00000409323 Q6ZUG5 572 aa16.6■□□□□ 0.25
CHRNA1-204ENST00000409323 IQCA1Q86XH1 822 aa16.6■□□□□ 0.25
CHRNA1-204ENST00000409323 ENAHQ8N8S7 591 aaPredicted RBP16.6■□□□□ 0.25
CHRNA1-204ENST00000409323 ZSCAN10Q96SZ4 725 aaPredicted RBP16.6■□□□□ 0.25
CHRNA1-204ENST00000409323 CLIP2Q9UDT6 1046 aa16.6■□□□□ 0.25
CHRNA1-204ENST00000409323 ZHX2Q9Y6X8 837 aa16.6■□□□□ 0.25
CHRNA1-204ENST00000409323 IGKV6D-41A0A0C4DH26 115 aa16.6■□□□□ 0.25
CHRNA1-204ENST00000409323 A0A1W2PRG0 241 aa16.6■□□□□ 0.25
CHRNA1-204ENST00000409323 TRIM75PA6NK02 468 aa16.6■□□□□ 0.25
CHRNA1-204ENST00000409323 TMEM88BA6NKF7 163 aa16.6■□□□□ 0.25
CHRNA1-204ENST00000409323 FGD1P98174 961 aa16.6■□□□□ 0.25
CHRNA1-204ENST00000409323 SIAH1Q8IUQ4 282 aa16.6■□□□□ 0.25
CHRNA1-204ENST00000409323 PDRG1Q9NUG6 133 aa16.6■□□□□ 0.25
CHRNA1-204ENST00000409323 MTMR4Q9NYA4 1195 aa16.6■□□□□ 0.25
CHRNA1-204ENST00000409323 PLIN4Q96Q06 1357 aa16.59■□□□□ 0.25
CHRNA1-204ENST00000409323 GJA5P36382 358 aa16.59■□□□□ 0.25
CHRNA1-204ENST00000409323 NOL9Q5SY16 702 aaKnown RBP16.59■□□□□ 0.25
CHRNA1-204ENST00000409323 RCSD1Q6JBY9 416 aa16.59■□□□□ 0.25
CHRNA1-204ENST00000409323 PAXIP1Q6ZW49 1069 aaPredicted RBP16.59■□□□□ 0.25
CHRNA1-204ENST00000409323 SAPCD2Q86UD0 394 aa16.59■□□□□ 0.25
CHRNA1-204ENST00000409323 IGDCC4Q8TDY8 1250 aa16.59■□□□□ 0.25
CHRNA1-204ENST00000409323 OPTNQ96CV9 577 aa16.59■□□□□ 0.25
CHRNA1-204ENST00000409323 SLC10A4Q96EP9 437 aa16.59■□□□□ 0.25
CHRNA1-204ENST00000409323 MYL10Q9BUA6 226 aa16.59■□□□□ 0.25
CHRNA1-204ENST00000409323 NAP1L2Q9ULW6 460 aaPredicted RBP16.59■□□□□ 0.25
CHRNA1-204ENST00000409323 USP17L5A8MUK1 530 aa16.58■□□□□ 0.24
CHRNA1-204ENST00000409323 SH2B2O14492 632 aaPredicted RBP16.58■□□□□ 0.24
CHRNA1-204ENST00000409323 FKBP1BP68106 108 aa16.58■□□□□ 0.24
CHRNA1-204ENST00000409323 SPP2Q13103 211 aa16.58■□□□□ 0.24
CHRNA1-204ENST00000409323 WTAPQ15007 396 aa16.58■□□□□ 0.24
CHRNA1-204ENST00000409323 SEC23AQ15436 765 aa16.58■□□□□ 0.24
CHRNA1-204ENST00000409323 TM6SF1Q9BZW5 370 aa16.58■□□□□ 0.24
CHRNA1-204ENST00000409323 KANSL2Q9H9L4 492 aa16.58■□□□□ 0.24
CHRNA1-204ENST00000409323 ERICH2A1L162 156 aa16.57■□□□□ 0.24
CHRNA1-204ENST00000409323 CD2BP2O95400 341 aaKnown RBP16.57■□□□□ 0.24
CHRNA1-204ENST00000409323 HMGB1P09429 215 aaKnown RBP16.57■□□□□ 0.24
CHRNA1-204ENST00000409323 RXRAP19793 462 aa16.57■□□□□ 0.24
CHRNA1-204ENST00000409323 APOBRQ0VD83 1088 aa16.57■□□□□ 0.24
CHRNA1-204ENST00000409323 TOB2Q14106 344 aaPredicted RBP16.57■□□□□ 0.24
CHRNA1-204ENST00000409323 IFIT1BQ5T764 474 aaKnown RBP16.57■□□□□ 0.24
CHRNA1-204ENST00000409323 BRF1Q92994 677 aa16.57■□□□□ 0.24
CHRNA1-204ENST00000409323 IL17RAQ96F46 866 aa16.57■□□□□ 0.24
CHRNA1-204ENST00000409323 FEZ1Q99689 392 aa16.57■□□□□ 0.24
CHRNA1-204ENST00000409323 TMEM47Q9BQJ4 181 aa16.57■□□□□ 0.24
CHRNA1-204ENST00000409323 LY9Q9HBG7 655 aa16.57■□□□□ 0.24
CHRNA1-204ENST00000409323 TLL2Q9Y6L7 1015 aa16.57■□□□□ 0.24
CHRNA1-204ENST00000409323 IRF6O14896 467 aa16.56■□□□□ 0.24
CHRNA1-204ENST00000409323 TTLL1O95922 423 aa16.56■□□□□ 0.24
CHRNA1-204ENST00000409323 APLP1P51693 650 aa16.56■□□□□ 0.24
CHRNA1-204ENST00000409323 ZNF157P51786 506 aaPredicted RBP16.56■□□□□ 0.24
CHRNA1-204ENST00000409323 AK2P54819 239 aa16.56■□□□□ 0.24
CHRNA1-204ENST00000409323 MTMR2Q13614 643 aa16.56■□□□□ 0.24
CHRNA1-204ENST00000409323 SART3Q15020 963 aaKnown RBP16.56■□□□□ 0.24
CHRNA1-204ENST00000409323 KIAA1755Q5JYT7 1200 aa16.56■□□□□ 0.24
CHRNA1-204ENST00000409323 NFXL1Q6ZNB6 911 aa16.56■□□□□ 0.24
CHRNA1-204ENST00000409323 SPICE1Q8N0Z3 855 aa16.56■□□□□ 0.24
CHRNA1-204ENST00000409323 TCP11L1Q9NUJ3 509 aa16.56■□□□□ 0.24
CHRNA1-204ENST00000409323 TAOK2Q9UL54 1235 aa16.56■□□□□ 0.24
CHRNA1-204ENST00000409323 SPDYE5A6NIY4 337 aa16.55■□□□□ 0.24
CHRNA1-204ENST00000409323 DTNBO60941 627 aa16.55■□□□□ 0.24
CHRNA1-204ENST00000409323 RABEP1Q15276 862 aa16.55■□□□□ 0.24
CHRNA1-204ENST00000409323 ERO1BQ86YB8 467 aa16.55■□□□□ 0.24
CHRNA1-204ENST00000409323 CCDC144CPQ8IYA2 1237 aa16.55■□□□□ 0.24
CHRNA1-204ENST00000409323 TTC14Q96N46 770 aa16.55■□□□□ 0.24
CHRNA1-204ENST00000409323 BRPF3Q9ULD4 1205 aa16.55■□□□□ 0.24
CHRNA1-204ENST00000409323 HMGCS2P54868 508 aa16.55■□□□□ 0.24
CHRNA1-204ENST00000409323 CYP4F22Q6NT55 531 aa16.55■□□□□ 0.24
CHRNA1-204ENST00000409323 ZNF280CQ8ND82 737 aa16.55■□□□□ 0.24
CHRNA1-204ENST00000409323 WNK4Q96J92 1243 aa16.55■□□□□ 0.24
CHRNA1-204ENST00000409323 TMEM87BQ96K49 555 aa16.55■□□□□ 0.24
CHRNA1-204ENST00000409323 NUP88Q99567 741 aaPredicted RBP16.55■□□□□ 0.24
CHRNA1-204ENST00000409323 KAT14Q9H8E8 782 aa16.55■□□□□ 0.24
CHRNA1-204ENST00000409323 ARHGEF10LQ9HCE6 1279 aa16.55■□□□□ 0.24
CHRNA1-204ENST00000409323 NYAP2Q9P242 653 aa16.55■□□□□ 0.24
CHRNA1-204ENST00000409323 ISY1Q9ULR0 285 aaKnown RBP16.55■□□□□ 0.24
CHRNA1-204ENST00000409323 AFG3L2Q9Y4W6 797 aa16.55■□□□□ 0.24
CHRNA1-204ENST00000409323 PTPRFP10586 1907 aa16.55■□□□□ 0.24
CHRNA1-204ENST00000409323 STK3Q13188 491 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms