RNA–Protein interactions for RNA: ENST00000409115.7

PTMA-202, Transcript of prothymosin alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTMA, Length 1,221 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-202ENST00000409115 C15orf52Q6ZUT6 534 aaKnown RBP12.08□□□□□ -0.48
PTMA-202ENST00000409115 ERO1AQ96HE7 468 aa12.08□□□□□ -0.48
PTMA-202ENST00000409115 ZNF70Q9UC06 446 aaPredicted RBP12.08□□□□□ -0.48
PTMA-202ENST00000409115 PTPN22Q9Y2R2 807 aa12.08□□□□□ -0.48
PTMA-202ENST00000409115 PHIPQ8WWQ0 1821 aa12.08□□□□□ -0.48
PTMA-202ENST00000409115 ATAD5Q96QE3 1844 aa12.08□□□□□ -0.48
PTMA-202ENST00000409115 TRIOBPQ9H2D6 2365 aa12.07□□□□□ -0.48
PTMA-202ENST00000409115 TCP10L2B9ZVM9 353 aa12.07□□□□□ -0.48
PTMA-202ENST00000409115 MYO1BO43795 1136 aa12.07□□□□□ -0.48
PTMA-202ENST00000409115 GRM5P41594 1212 aa12.07□□□□□ -0.48
PTMA-202ENST00000409115 EXOSC9Q06265 439 aaKnown RBP12.07□□□□□ -0.48
PTMA-202ENST00000409115 NR5A1Q13285 461 aa12.07□□□□□ -0.48
PTMA-202ENST00000409115 DOCK1Q14185 1865 aa12.07□□□□□ -0.48
PTMA-202ENST00000409115 TSGA10IPQ3SY00 556 aa12.07□□□□□ -0.48
PTMA-202ENST00000409115 TAF7LQ5H9L4 462 aa12.07□□□□□ -0.48
PTMA-202ENST00000409115 HABP4Q5JVS0 413 aaKnown RBP12.07□□□□□ -0.48
PTMA-202ENST00000409115 MFSD14BQ5SR56 506 aa12.07□□□□□ -0.48
PTMA-202ENST00000409115 BEND3Q5T5X7 828 aa12.07□□□□□ -0.48
PTMA-202ENST00000409115 ANKRD13AQ8IZ07 590 aa12.07□□□□□ -0.48
PTMA-202ENST00000409115 BRI3BPQ8WY22 251 aa12.07□□□□□ -0.48
PTMA-202ENST00000409115 PUS3Q9BZE2 481 aaKnown RBP12.07□□□□□ -0.48
PTMA-202ENST00000409115 TMEM39BQ9GZU3 492 aa12.07□□□□□ -0.48
PTMA-202ENST00000409115 VRTNQ9H8Y1 702 aa12.07□□□□□ -0.48
PTMA-202ENST00000409115 CNNM1Q9NRU3 951 aa12.07□□□□□ -0.48
PTMA-202ENST00000409115 TTF2Q9UNY4 1162 aaKnown RBP12.07□□□□□ -0.48
PTMA-202ENST00000409115 PTCH2Q9Y6C5 1203 aa12.07□□□□□ -0.48
PTMA-202ENST00000409115 ERVH48-1M5A8F1 160 aa12.06□□□□□ -0.48
PTMA-202ENST00000409115 DHX9Q08211 1270 aaKnown RBP12.06□□□□□ -0.48
PTMA-202ENST00000409115 VGLL4Q14135 290 aa12.06□□□□□ -0.48
PTMA-202ENST00000409115 TAF1CQ15572 869 aaPredicted RBP12.06□□□□□ -0.48
PTMA-202ENST00000409115 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.06□□□□□ -0.48
PTMA-202ENST00000409115 FAM43AQ8N2R8 423 aa12.06□□□□□ -0.48
PTMA-202ENST00000409115 SNIP1Q8TAD8 396 aaKnown RBP12.06□□□□□ -0.48
PTMA-202ENST00000409115 TEPSINQ96N21 525 aa12.06□□□□□ -0.48
PTMA-202ENST00000409115 ARHGAP39Q9C0H5 1083 aa12.06□□□□□ -0.48
PTMA-202ENST00000409115 EFCC1Q9HA90 598 aa12.06□□□□□ -0.48
PTMA-202ENST00000409115 DOCK3Q8IZD9 2030 aa12.06□□□□□ -0.48
PTMA-202ENST00000409115 CCL15-CCL14A0A0B4J2E2 113 aa12.05□□□□□ -0.48
PTMA-202ENST00000409115 TNFRSF10AO00220 468 aa12.05□□□□□ -0.48
PTMA-202ENST00000409115 GRM8O00222 908 aa12.05□□□□□ -0.48
PTMA-202ENST00000409115 VAMP4O75379 141 aa12.05□□□□□ -0.48
PTMA-202ENST00000409115 MMP14P50281 582 aa12.05□□□□□ -0.48
PTMA-202ENST00000409115 SP3Q02447 781 aa12.05□□□□□ -0.48
PTMA-202ENST00000409115 CHAF1AQ13111 956 aaPredicted RBP12.05□□□□□ -0.48
PTMA-202ENST00000409115 CCL15Q16663 113 aa12.05□□□□□ -0.48
PTMA-202ENST00000409115 CCDC27Q2M243 656 aa12.05□□□□□ -0.48
PTMA-202ENST00000409115 SUPT20HL1Q3ZLR7 823 aa12.05□□□□□ -0.48
PTMA-202ENST00000409115 LDHAL6AQ6ZMR3 332 aa12.05□□□□□ -0.48
PTMA-202ENST00000409115 CCDC116Q8IYX3 515 aa12.05□□□□□ -0.48
PTMA-202ENST00000409115 ARMC5Q96C12 935 aa12.05□□□□□ -0.48
PTMA-202ENST00000409115 SUCLG2Q96I99 432 aa12.05□□□□□ -0.48
PTMA-202ENST00000409115 CHMP4AQ9BY43 222 aa12.05□□□□□ -0.48
PTMA-202ENST00000409115 WASF2Q9Y6W5 498 aa12.05□□□□□ -0.48
PTMA-202ENST00000409115 IL16Q14005 1332 aa12.05□□□□□ -0.48
PTMA-202ENST00000409115 FAM205AQ6ZU69 1335 aa12.05□□□□□ -0.48
PTMA-202ENST00000409115 GDF9O60383 454 aa12.04□□□□□ -0.48
PTMA-202ENST00000409115 CRKP46108 304 aa12.04□□□□□ -0.48
PTMA-202ENST00000409115 INHBEP58166 350 aa12.04□□□□□ -0.48
PTMA-202ENST00000409115 FKBP1AP62942 108 aaKnown RBP12.04□□□□□ -0.48
PTMA-202ENST00000409115 CCDC57Q2TAC2 916 aa12.04□□□□□ -0.48
PTMA-202ENST00000409115 DZIP1LQ8IYY4 767 aaKnown RBP12.04□□□□□ -0.48
PTMA-202ENST00000409115 CYP4X1Q8N118 509 aa12.04□□□□□ -0.48
PTMA-202ENST00000409115 TDRD7Q8NHU6 1098 aaKnown RBP12.04□□□□□ -0.48
PTMA-202ENST00000409115 ZNF333Q96JL9 665 aa12.04□□□□□ -0.48
PTMA-202ENST00000409115 NOD1Q9Y239 953 aa12.04□□□□□ -0.48
PTMA-202ENST00000409115 TTC24A2A3L6 582 aaPredicted RBP12.03□□□□□ -0.48
PTMA-202ENST00000409115 RGS20O76081 388 aa12.03□□□□□ -0.48
PTMA-202ENST00000409115 SLC4A10Q6U841 1118 aa12.03□□□□□ -0.48
PTMA-202ENST00000409115 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.03□□□□□ -0.485e-13■■■□□ 18
PTMA-202ENST00000409115 SH3TC2Q8TF17 1288 aa12.03□□□□□ -0.48
PTMA-202ENST00000409115 GCC1Q96CN9 775 aa12.03□□□□□ -0.48
PTMA-202ENST00000409115 KAZALD1Q96I82 304 aa12.03□□□□□ -0.48
PTMA-202ENST00000409115 FAM84BQ96KN1 310 aaPredicted RBP12.03□□□□□ -0.48
PTMA-202ENST00000409115 SNCAIPQ9Y6H5 919 aa12.03□□□□□ -0.48
PTMA-202ENST00000409115 FXR1P51114 621 aaKnown RBP eCLIP12.02□□□□□ -0.49
PTMA-202ENST00000409115 USP4Q13107 963 aa12.02□□□□□ -0.49
PTMA-202ENST00000409115 TNFAIP1Q13829 316 aa12.02□□□□□ -0.49
PTMA-202ENST00000409115 SLC9C1Q4G0N8 1177 aa12.02□□□□□ -0.49
PTMA-202ENST00000409115 INTS3Q68E01 1043 aaKnown RBP12.02□□□□□ -0.49
PTMA-202ENST00000409115 OTUD7BQ6GQQ9 843 aa12.02□□□□□ -0.49
PTMA-202ENST00000409115 TRIM50Q86XT4 487 aa12.02□□□□□ -0.49
PTMA-202ENST00000409115 CDK5RAP2Q96SN8 1893 aa12.02□□□□□ -0.49
PTMA-202ENST00000409115 NR3C2P08235 984 aa12.01□□□□□ -0.49
PTMA-202ENST00000409115 HIBADHP31937 336 aaKnown RBP12.01□□□□□ -0.49
PTMA-202ENST00000409115 NNTQ13423 1086 aa12.01□□□□□ -0.49
PTMA-202ENST00000409115 LRRC24Q50LG9 513 aa12.01□□□□□ -0.49
PTMA-202ENST00000409115 PPP1R26Q5T8A7 1209 aaPredicted RBP12.01□□□□□ -0.49
PTMA-202ENST00000409115 KLHDC4Q8TBB5 520 aa12.01□□□□□ -0.49
PTMA-202ENST00000409115 WRNIP1Q96S55 665 aa12.01□□□□□ -0.49
PTMA-202ENST00000409115 MRS2Q9HD23 443 aa12.01□□□□□ -0.49
PTMA-202ENST00000409115 C9orf78Q9NZ63 289 aaPredicted RBP12.01□□□□□ -0.49
PTMA-202ENST00000409115 MYO5AQ9Y4I1 1855 aaKnown RBP12□□□□□ -0.49
PTMA-202ENST00000409115 ATG7O95352 703 aa12□□□□□ -0.49
PTMA-202ENST00000409115 NBPF7P0C2Y1 421 aaPredicted RBP12□□□□□ -0.49
PTMA-202ENST00000409115 CTGFP29279 349 aa12□□□□□ -0.49
PTMA-202ENST00000409115 PRR20EP86478 221 aa12□□□□□ -0.49
PTMA-202ENST00000409115 PRR20CP86479 221 aa12□□□□□ -0.49
PTMA-202ENST00000409115 PRR20DP86480 221 aa12□□□□□ -0.49
PTMA-202ENST00000409115 PRR20BP86481 221 aa12□□□□□ -0.49
PTMA-202ENST00000409115 PRR20AP86496 221 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms