RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 IRX2Q9BZI1 471 aaPredicted RBP4.28□□□□□ -1.72
RGPD4-201ENST00000408999 OCEL1Q9H607 264 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 PALD1Q9ULE6 856 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 KIDINS220Q9ULH0 1771 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 HEG1Q9ULI3 1381 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 V9GY48 417 aaPredicted RBP4.28□□□□□ -1.72
RGPD4-201ENST00000408999 WNK3Q9BYP7 1800 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 CPSF1Q10570 1443 aaKnown RBP4.27□□□□□ -1.73
RGPD4-201ENST00000408999 PTCH1Q13635 1447 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 A0A1B0GVL5 298 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 BICDL2A1A5D9 508 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 GOLGA6L9A6NEM1 432 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 PPIP5K2O43314 1243 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 CHMP2AO43633 222 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 ADORA1P30542 326 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 ADCY7P51828 1080 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 POLA2Q14181 598 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 ANO1Q5XXA6 986 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 LUZP1Q86V48 1076 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 TAX1BP1Q86VP1 789 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 PHKBQ93100 1093 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 SH3BP1Q9Y3L3 701 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 ITSN1Q15811 1721 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 COL7A1Q02388 2944 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 MED23Q9ULK4 1368 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 SPATA31A3Q5VYP0 1347 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 ANKRD62A6NC57 917 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 TMCO5BA8MYB1 307 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 MCM3P25205 808 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 STX17P56962 302 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 RPS8P62241 208 aaKnown RBP4.27□□□□□ -1.73
RGPD4-201ENST00000408999 C1QTNF12Q5T7M4 302 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 OTUD7BQ6GQQ9 843 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 TMCO3Q6UWJ1 677 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 UNC5CLQ8IV45 518 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 PDCL2Q8N4E4 241 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 EAF2Q96CJ1 260 aaPredicted RBP4.27□□□□□ -1.73
RGPD4-201ENST00000408999 PUS3Q9BZE2 481 aaKnown RBP4.27□□□□□ -1.73
RGPD4-201ENST00000408999 TRIM37O94972 964 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 ATP2B4P23634 1241 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 CCT6AP40227 531 aaKnown RBP4.27□□□□□ -1.73
RGPD4-201ENST00000408999 BAG6P46379 1132 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 GTF2IP78347 998 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 CBX1P83916 185 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 SP4Q02446 784 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 UBXN1Q04323 297 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 FAM160A1Q05DH4 1040 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 KCNB2Q92953 911 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 ZSCAN10Q96SZ4 725 aaPredicted RBP4.27□□□□□ -1.73
RGPD4-201ENST00000408999 SEC62Q99442 399 aaKnown RBP4.27□□□□□ -1.73
RGPD4-201ENST00000408999 GBP3Q9H0R5 595 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 USP40Q9NVE5 1235 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 ZBTB1Q9Y2K1 713 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 THRAP3Q9Y2W1 955 aaKnown RBP4.27□□□□□ -1.73
RGPD4-201ENST00000408999 PTPRMP28827 1452 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 DEPDC5O75140 1603 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 JAK2O60674 1132 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 CAPN15O75808 1086 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 BTDP43251 543 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 DOK7Q18PE1 504 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 USH1GQ495M9 461 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 RILPL1Q5EBL4 403 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 TTC38Q5R3I4 469 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 MFSD14BQ5SR56 506 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 TAF3Q5VWG9 929 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 SV2BQ7L1I2 683 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 TBC1D22AQ8WUA7 517 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.27□□□□□ -1.73
RGPD4-201ENST00000408999 CGNQ9P2M7 1197 aaKnown RBP4.27□□□□□ -1.73
RGPD4-201ENST00000408999 MRVI1Q9Y6F6 885 aa4.27□□□□□ -1.73
RGPD4-201ENST00000408999 H0YHG0 523 aa4.26□□□□□ -1.73
RGPD4-201ENST00000408999 CCDC172P0C7W6 258 aa4.26□□□□□ -1.73
RGPD4-201ENST00000408999 IL6STP40189 918 aaPredicted RBP4.26□□□□□ -1.73
RGPD4-201ENST00000408999 SPAG1Q07617 926 aa4.26□□□□□ -1.73
RGPD4-201ENST00000408999 ME3Q16798 604 aa4.26□□□□□ -1.73
RGPD4-201ENST00000408999 MAP9Q49MG5 647 aa4.26□□□□□ -1.73
RGPD4-201ENST00000408999 SPECC1Q5M775 1068 aa4.26□□□□□ -1.73
RGPD4-201ENST00000408999 FAM182BQ5T319 152 aa4.26□□□□□ -1.73
RGPD4-201ENST00000408999 USP37Q86T82 979 aa4.26□□□□□ -1.73
RGPD4-201ENST00000408999 IFNL3Q8IZI9 196 aa4.26□□□□□ -1.73
RGPD4-201ENST00000408999 EHBP1Q8NDI1 1231 aa4.26□□□□□ -1.73
RGPD4-201ENST00000408999 FLAD1Q8NFF5 587 aa4.26□□□□□ -1.73
RGPD4-201ENST00000408999 RNF217Q8TC41 542 aa4.26□□□□□ -1.73
RGPD4-201ENST00000408999 SDR42E1Q8WUS8 393 aa4.26□□□□□ -1.73
RGPD4-201ENST00000408999 JADE2Q9NQC1 790 aa4.26□□□□□ -1.73
RGPD4-201ENST00000408999 KCNJ14Q9UNX9 436 aa4.26□□□□□ -1.73
RGPD4-201ENST00000408999 TTF2Q9UNY4 1162 aaKnown RBP4.26□□□□□ -1.73
RGPD4-201ENST00000408999 AGLP35573 1532 aa4.26□□□□□ -1.73
RGPD4-201ENST00000408999 RGPD1P0DJD0 1748 aa4.26□□□□□ -1.73
RGPD4-201ENST00000408999 BAZ2BQ9UIF8 2168 aaKnown RBP4.26□□□□□ -1.73
RGPD4-201ENST00000408999 ZMYM6O95789 1325 aa4.26□□□□□ -1.73
RGPD4-201ENST00000408999 FRMPD2Q68DX3 1309 aaPredicted RBP4.26□□□□□ -1.73
RGPD4-201ENST00000408999 MACROD2A1Z1Q3 448 aa4.26□□□□□ -1.73
RGPD4-201ENST00000408999 B4DLN1 442 aa4.26□□□□□ -1.73
RGPD4-201ENST00000408999 POTEB2H3BUK9 544 aa4.26□□□□□ -1.73
RGPD4-201ENST00000408999 PHACTR2O75167 634 aa4.26□□□□□ -1.73
RGPD4-201ENST00000408999 PDE6AP16499 860 aa4.26□□□□□ -1.73
RGPD4-201ENST00000408999 MRPL12P52815 198 aaKnown RBP4.26□□□□□ -1.73
RGPD4-201ENST00000408999 PRPF4BQ13523 1007 aaKnown RBP4.26□□□□□ -1.73
RGPD4-201ENST00000408999 AKNAD1Q5T1N1 836 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms