RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 WNK3Q9BYP7 1800 aa21.04■□□□□ 0.96
EWSR1-207ENST00000406548 A0A087X0B3 334 aa21.04■□□□□ 0.96
EWSR1-207ENST00000406548 TPM1P09493 284 aa21.04■□□□□ 0.96
EWSR1-207ENST00000406548 INTS5Q6P9B9 1019 aaKnown RBP21.04■□□□□ 0.96
EWSR1-207ENST00000406548 ENAHQ8N8S7 591 aaPredicted RBP21.04■□□□□ 0.96
EWSR1-207ENST00000406548 CCDC87Q9NVE4 849 aa21.04■□□□□ 0.96
EWSR1-207ENST00000406548 AHDC1Q5TGY3 1603 aaPredicted RBP21.03■□□□□ 0.96
EWSR1-207ENST00000406548 SYNRGQ9UMZ2 1314 aa21.03■□□□□ 0.96
EWSR1-207ENST00000406548 PNMA6AP0CW24 399 aaPredicted RBP21.03■□□□□ 0.96
EWSR1-207ENST00000406548 FUT2Q10981 343 aa21.03■□□□□ 0.96
EWSR1-207ENST00000406548 TMCO3Q6UWJ1 677 aa21.03■□□□□ 0.96
EWSR1-207ENST00000406548 SH3RF1Q7Z6J0 888 aa21.03■□□□□ 0.96
EWSR1-207ENST00000406548 EPSTI1Q96J88 318 aa21.03■□□□□ 0.96
EWSR1-207ENST00000406548 ZSCAN10Q96SZ4 725 aaPredicted RBP21.03■□□□□ 0.96
EWSR1-207ENST00000406548 IQSEC3Q9UPP2 1182 aaPredicted RBP21.03■□□□□ 0.96
EWSR1-207ENST00000406548 DLEC1Q9Y238 1755 aa21.03■□□□□ 0.96
EWSR1-207ENST00000406548 PRPF3O43395 683 aaKnown RBP21.02■□□□□ 0.96
EWSR1-207ENST00000406548 ZRANB2O95218 330 aaKnown RBP eCLIP21.02■□□□□ 0.96
EWSR1-207ENST00000406548 NTSR2O95665 410 aa21.02■□□□□ 0.96
EWSR1-207ENST00000406548 EARS2Q5JPH6 523 aaKnown RBP21.02■□□□□ 0.96
EWSR1-207ENST00000406548 ST7Q9NRC1 585 aa21.02■□□□□ 0.96
EWSR1-207ENST00000406548 ABCF2Q9UG63 623 aa21.02■□□□□ 0.96
EWSR1-207ENST00000406548 ZNF804BA4D1E1 1349 aa21.02■□□□□ 0.96
EWSR1-207ENST00000406548 CAMTA2O94983 1202 aa21.02■□□□□ 0.96
EWSR1-207ENST00000406548 BMP15O95972 392 aa21.02■□□□□ 0.96
EWSR1-207ENST00000406548 MAP3K9P80192 1104 aa21.02■□□□□ 0.96
EWSR1-207ENST00000406548 SPATA1Q5VX52 437 aa21.02■□□□□ 0.96
EWSR1-207ENST00000406548 APTXQ7Z2E3 356 aaKnown RBP21.02■□□□□ 0.96
EWSR1-207ENST00000406548 SYMPKQ92797 1274 aaKnown RBP21.02■□□□□ 0.96
EWSR1-207ENST00000406548 FERMT2Q96AC1 680 aa21.02■□□□□ 0.96
EWSR1-207ENST00000406548 KIFC2Q96AC6 838 aa21.02■□□□□ 0.96
EWSR1-207ENST00000406548 MRFAP1Q9Y605 127 aa21.02■□□□□ 0.96
EWSR1-207ENST00000406548 CACNA1SQ13698 1873 aa21.02■□□□□ 0.96
EWSR1-207ENST00000406548 COL4A1P02462 1669 aa21.02■□□□□ 0.95
EWSR1-207ENST00000406548 AKR1B15C9JRZ8 316 aaPredicted RBP21.01■□□□□ 0.95
EWSR1-207ENST00000406548 SMIM22K7EJ46 135 aa21.01■□□□□ 0.95
EWSR1-207ENST00000406548 PRDM1O75626 825 aa21.01■□□□□ 0.95
EWSR1-207ENST00000406548 AFMP43652 599 aa21.01■□□□□ 0.95
EWSR1-207ENST00000406548 PAGE5Q96GU1 130 aa21.01■□□□□ 0.95
EWSR1-207ENST00000406548 PANX2Q96RD6 677 aa21.01■□□□□ 0.95
EWSR1-207ENST00000406548 RIOK1Q9BRS2 568 aaKnown RBP21.01■□□□□ 0.95
EWSR1-207ENST00000406548 DESI2Q9BSY9 194 aa21.01■□□□□ 0.95
EWSR1-207ENST00000406548 BAZ2AQ9UIF9 1905 aaKnown RBP21.01■□□□□ 0.95
EWSR1-207ENST00000406548 A0A1B0GUL6 1792 aa21.01■□□□□ 0.95
EWSR1-207ENST00000406548 PLEKHA8P1O95397 391 aa21.01■□□□□ 0.95
EWSR1-207ENST00000406548 CRKLP46109 303 aaKnown RBP21.01■□□□□ 0.95
EWSR1-207ENST00000406548 CUL4BQ13620 913 aa21.01■□□□□ 0.95
EWSR1-207ENST00000406548 IFIT1BQ5T764 474 aaKnown RBP21.01■□□□□ 0.95
EWSR1-207ENST00000406548 CATIPQ7Z7H3 387 aa21.01■□□□□ 0.95
EWSR1-207ENST00000406548 RBM28Q9NW13 759 aaKnown RBP21.01■□□□□ 0.95
EWSR1-207ENST00000406548 COL1A1P02452 1464 aaPredicted RBP21.01■□□□□ 0.95
EWSR1-207ENST00000406548 RREB1Q92766 1687 aa21.01■□□□□ 0.95
EWSR1-207ENST00000406548 CD44P16070 742 aaKnown RBP21■□□□□ 0.95
EWSR1-207ENST00000406548 PPP2R3AQ06190 1150 aa21■□□□□ 0.95
EWSR1-207ENST00000406548 KLHL10Q6JEL2 608 aa21■□□□□ 0.95
EWSR1-207ENST00000406548 BRMS1Q9HCU9 246 aa21■□□□□ 0.95
EWSR1-207ENST00000406548 hCG_1642624A0A1W2PR95 340 aa21■□□□□ 0.95
EWSR1-207ENST00000406548 TEX33O43247 280 aa21■□□□□ 0.95
EWSR1-207ENST00000406548 NIP7Q9Y221 180 aaKnown RBP eCLIP21■□□□□ 0.95
EWSR1-207ENST00000406548 V9GY48 417 aaPredicted RBP21■□□□□ 0.95
EWSR1-207ENST00000406548 CCDC175P0C221 793 aa20.99■□□□□ 0.95
EWSR1-207ENST00000406548 STX17P56962 302 aa20.99■□□□□ 0.95
EWSR1-207ENST00000406548 FAM193AP78312 1265 aa20.99■□□□□ 0.95
EWSR1-207ENST00000406548 DPYDQ12882 1025 aa20.99■□□□□ 0.95
EWSR1-207ENST00000406548 CDKAL1Q5VV42 579 aa20.99■□□□□ 0.95
EWSR1-207ENST00000406548 GSDMAQ96QA5 445 aa20.99■□□□□ 0.95
EWSR1-207ENST00000406548 CDC5LQ99459 802 aaKnown RBP20.99■□□□□ 0.95
EWSR1-207ENST00000406548 MRPL44Q9H9J2 332 aaKnown RBP20.99■□□□□ 0.95
EWSR1-207ENST00000406548 GNL3LQ9NVN8 582 aaKnown RBP20.99■□□□□ 0.95
EWSR1-207ENST00000406548 SOWAHDA6NJG2 315 aa20.98■□□□□ 0.95
EWSR1-207ENST00000406548 WNT7AO00755 349 aa20.98■□□□□ 0.95
EWSR1-207ENST00000406548 CASP1P29466 404 aa20.98■□□□□ 0.95
EWSR1-207ENST00000406548 GYG1P46976 350 aa20.98■□□□□ 0.95
EWSR1-207ENST00000406548 MTF1Q14872 753 aa20.98■□□□□ 0.95
EWSR1-207ENST00000406548 KARSQ15046 597 aaKnown RBP20.98■□□□□ 0.95
EWSR1-207ENST00000406548 IGSF22Q8N9C0 903 aa20.98■□□□□ 0.95
EWSR1-207ENST00000406548 TNFRSF25Q93038 417 aa20.98■□□□□ 0.95
EWSR1-207ENST00000406548 BRIP1Q9BX63 1249 aa20.98■□□□□ 0.95
EWSR1-207ENST00000406548 CYP2D7A0A087X1C5 515 aa20.98■□□□□ 0.95
EWSR1-207ENST00000406548 CALM1P0DP23 149 aa20.98■□□□□ 0.95
EWSR1-207ENST00000406548 CALM2P0DP24 149 aa20.98■□□□□ 0.95
EWSR1-207ENST00000406548 CALM3P0DP25 149 aa20.98■□□□□ 0.95
EWSR1-207ENST00000406548 PBX1P40424 430 aa20.98■□□□□ 0.95
EWSR1-207ENST00000406548 PLA2G4AP47712 749 aa20.98■□□□□ 0.95
EWSR1-207ENST00000406548 TROAPQ12815 778 aa20.98■□□□□ 0.95
EWSR1-207ENST00000406548 PPFIBP1Q86W92 1011 aa20.98■□□□□ 0.95
EWSR1-207ENST00000406548 IQCA1Q86XH1 822 aa20.98■□□□□ 0.95
EWSR1-207ENST00000406548 CTAGE1Q96RT6 745 aa20.98■□□□□ 0.95
EWSR1-207ENST00000406548 NAA15Q9BXJ9 866 aaKnown RBP20.98■□□□□ 0.95
EWSR1-207ENST00000406548 ADD3Q9UEY8 706 aaKnown RBP20.98■□□□□ 0.95
EWSR1-207ENST00000406548 SCN7AQ01118 1682 aa20.98■□□□□ 0.95
EWSR1-207ENST00000406548 SEMA3EO15041 775 aa20.97■□□□□ 0.95
EWSR1-207ENST00000406548 ATP6V1AP38606 617 aa20.97■□□□□ 0.95
EWSR1-207ENST00000406548 RBL2Q08999 1139 aa20.97■□□□□ 0.95
EWSR1-207ENST00000406548 TTC38Q5R3I4 469 aa20.97■□□□□ 0.95
EWSR1-207ENST00000406548 CREBRFQ8IUR6 639 aa20.97■□□□□ 0.95
EWSR1-207ENST00000406548 GPR161Q8N6U8 529 aaKnown RBP20.97■□□□□ 0.95
EWSR1-207ENST00000406548 PPP1R3GB7ZBB8 358 aa20.97■□□□□ 0.95
EWSR1-207ENST00000406548 DDAH1O94760 285 aa20.97■□□□□ 0.95
EWSR1-207ENST00000406548 PCP11498 1178 aaKnown RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms