RNA–Protein interactions for RNA: ENST00000405444.3

TBC1D1-204, Transcript of TBC1 domain family member 1, humanhuman

TSL 4

Gene TBC1D1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-204ENST00000405444 LCORLQ8N3X6 602 aa20.36■□□□□ 0.85
TBC1D1-204ENST00000405444 DDRGK1Q96HY6 314 aa20.36■□□□□ 0.85
TBC1D1-204ENST00000405444 GPATCH3Q96I76 525 aa20.36■□□□□ 0.85
TBC1D1-204ENST00000405444 HTATIP2Q9BUP3 242 aa20.36■□□□□ 0.85
TBC1D1-204ENST00000405444 UNC93B1Q9H1C4 597 aa20.36■□□□□ 0.85
TBC1D1-204ENST00000405444 GJD2Q9UKL4 321 aa20.36■□□□□ 0.85
TBC1D1-204ENST00000405444 ERVK-9P63128 1117 aa20.35■□□□□ 0.85
TBC1D1-204ENST00000405444 ERVK-24P63145 666 aa20.35■□□□□ 0.85
TBC1D1-204ENST00000405444 UBE2Q1Q7Z7E8 422 aa20.35■□□□□ 0.85
TBC1D1-204ENST00000405444 TRMT44Q8IYL2 757 aaKnown RBP20.35■□□□□ 0.85
TBC1D1-204ENST00000405444 DCTPP1Q9H773 170 aa20.35■□□□□ 0.85
TBC1D1-204ENST00000405444 PAK6Q9NQU5 681 aaPredicted RBP20.35■□□□□ 0.85
TBC1D1-204ENST00000405444 RABGAP1Q9Y3P9 1069 aa20.35■□□□□ 0.85
TBC1D1-204ENST00000405444 MYH7P12883 1935 aa20.35■□□□□ 0.85
TBC1D1-204ENST00000405444 XRCC5P13010 732 aaKnown RBP20.34■□□□□ 0.85
TBC1D1-204ENST00000405444 CCNA1P78396 465 aa20.34■□□□□ 0.85
TBC1D1-204ENST00000405444 LBX2Q6XYB7 198 aa20.34■□□□□ 0.85
TBC1D1-204ENST00000405444 CCAR1Q8IX12 1150 aaKnown RBP20.34■□□□□ 0.85
TBC1D1-204ENST00000405444 SDR42E1Q8WUS8 393 aa20.34■□□□□ 0.85
TBC1D1-204ENST00000405444 EDC3Q96F86 508 aaKnown RBP20.34■□□□□ 0.85
TBC1D1-204ENST00000405444 NUDT12Q9BQG2 462 aa20.34■□□□□ 0.85
TBC1D1-204ENST00000405444 BCL11AQ9H165 835 aa20.34■□□□□ 0.85
TBC1D1-204ENST00000405444 TXNRD2Q9NNW7 524 aa20.34■□□□□ 0.85
TBC1D1-204ENST00000405444 ECHDC1Q9NTX5 307 aa20.34■□□□□ 0.85
TBC1D1-204ENST00000405444 RBPJLQ9UBG7 517 aa20.34■□□□□ 0.85
TBC1D1-204ENST00000405444 MBD4O95243 580 aa20.33■□□□□ 0.85
TBC1D1-204ENST00000405444 CATSPERGQ6ZRH7 1159 aa20.33■□□□□ 0.85
TBC1D1-204ENST00000405444 TMEM179Q6ZVK1 233 aa20.33■□□□□ 0.85
TBC1D1-204ENST00000405444 ARMT1Q9H993 441 aa20.33■□□□□ 0.85
TBC1D1-204ENST00000405444 FARP2O94887 1054 aaPredicted RBP20.32■□□□□ 0.84
TBC1D1-204ENST00000405444 VCAM1P19320 739 aa20.32■□□□□ 0.84
TBC1D1-204ENST00000405444 CCDC17Q96LX7 622 aa20.32■□□□□ 0.84
TBC1D1-204ENST00000405444 RPTORQ8N122 1335 aa20.31■□□□□ 0.84
TBC1D1-204ENST00000405444 GLRX3O76003 335 aaKnown RBP20.31■□□□□ 0.84
TBC1D1-204ENST00000405444 GUCY1A2P33402 732 aa20.31■□□□□ 0.84
TBC1D1-204ENST00000405444 ZYXQ15942 572 aaKnown RBP20.31■□□□□ 0.84
TBC1D1-204ENST00000405444 ACER1Q8TDN7 264 aa20.31■□□□□ 0.84
TBC1D1-204ENST00000405444 CRISPLD2Q9H0B8 497 aa20.31■□□□□ 0.84
TBC1D1-204ENST00000405444 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.31■□□□□ 0.84
TBC1D1-204ENST00000405444 SH2D4AQ9H788 454 aa20.31■□□□□ 0.84
TBC1D1-204ENST00000405444 PLXNB2O15031 1838 aa20.31■□□□□ 0.84
TBC1D1-204ENST00000405444 MYH8P13535 1937 aa20.3■□□□□ 0.84
TBC1D1-204ENST00000405444 MPHOSPH10O00566 681 aaKnown RBP20.3■□□□□ 0.84
TBC1D1-204ENST00000405444 TFRCP02786 760 aaKnown RBP20.3■□□□□ 0.84
TBC1D1-204ENST00000405444 SEPT2Q15019 361 aa20.3■□□□□ 0.84
TBC1D1-204ENST00000405444 GPR142Q7Z601 462 aa20.3■□□□□ 0.84
TBC1D1-204ENST00000405444 PLEKHH3Q7Z736 793 aa20.3■□□□□ 0.84
TBC1D1-204ENST00000405444 ANKLE1Q8NAG6 615 aa20.3■□□□□ 0.84
TBC1D1-204ENST00000405444 DEFB118Q96PH6 123 aa20.3■□□□□ 0.84
TBC1D1-204ENST00000405444 PAGR1Q9BTK6 254 aa20.3■□□□□ 0.84
TBC1D1-204ENST00000405444 HMX1Q9NP08 348 aaPredicted RBP20.3■□□□□ 0.84
TBC1D1-204ENST00000405444 SMARCA5O60264 1052 aaPredicted RBP20.29■□□□□ 0.84
TBC1D1-204ENST00000405444 RGS2P41220 211 aa20.29■□□□□ 0.84
TBC1D1-204ENST00000405444 LRRFIP1Q32MZ4 808 aaKnown RBP20.29■□□□□ 0.84
TBC1D1-204ENST00000405444 Q3C1V9 767 aa20.29■□□□□ 0.84
TBC1D1-204ENST00000405444 HABP4Q5JVS0 413 aaKnown RBP20.29■□□□□ 0.84
TBC1D1-204ENST00000405444 C12orf60Q5U649 245 aa20.29■□□□□ 0.84
TBC1D1-204ENST00000405444 LPAR1Q92633 364 aa20.29■□□□□ 0.84
TBC1D1-204ENST00000405444 DPF3Q92784 378 aa20.29■□□□□ 0.84
TBC1D1-204ENST00000405444 RPAP3Q9H6T3 665 aaPredicted RBP20.29■□□□□ 0.84
TBC1D1-204ENST00000405444 ARHGEF10LQ9HCE6 1279 aa20.29■□□□□ 0.84
TBC1D1-204ENST00000405444 CWC22Q9HCG8 908 aaKnown RBP20.29■□□□□ 0.84
TBC1D1-204ENST00000405444 PRKAB2O43741 272 aa20.28■□□□□ 0.84
TBC1D1-204ENST00000405444 ZFYP08048 801 aaPredicted RBP20.28■□□□□ 0.84
TBC1D1-204ENST00000405444 MORN1Q5T089 497 aa20.28■□□□□ 0.84
TBC1D1-204ENST00000405444 GIMAP6Q6P9H5 292 aa20.28■□□□□ 0.84
TBC1D1-204ENST00000405444 C16orf86Q6ZW13 317 aa20.28■□□□□ 0.84
TBC1D1-204ENST00000405444 KBTBD3Q8NAB2 608 aa20.28■□□□□ 0.84
TBC1D1-204ENST00000405444 USP6NLQ92738 828 aa20.28■□□□□ 0.84
TBC1D1-204ENST00000405444 APBA2Q99767 749 aa20.28■□□□□ 0.84
TBC1D1-204ENST00000405444 HOXC10Q9NYD6 342 aa20.28■□□□□ 0.84
TBC1D1-204ENST00000405444 ARPP21Q9UBL0 812 aaPredicted RBP20.28■□□□□ 0.84
TBC1D1-204ENST00000405444 NR2E3Q9Y5X4 410 aa20.28■□□□□ 0.84
TBC1D1-204ENST00000405444 SLC4A4Q9Y6R1 1079 aa20.28■□□□□ 0.84
TBC1D1-204ENST00000405444 CNMDO75829 334 aa20.27■□□□□ 0.84
TBC1D1-204ENST00000405444 CYP2D6P10635 497 aa20.27■□□□□ 0.84
TBC1D1-204ENST00000405444 ZKSCAN1P17029 563 aaPredicted RBP20.27■□□□□ 0.84
TBC1D1-204ENST00000405444 CYP2B6P20813 491 aa20.27■□□□□ 0.84
TBC1D1-204ENST00000405444 MAP3K21Q5TCX8 1036 aa20.27■□□□□ 0.84
TBC1D1-204ENST00000405444 TRIB2Q92519 343 aa20.27■□□□□ 0.84
TBC1D1-204ENST00000405444 PORCNQ9H237 461 aa20.27■□□□□ 0.84
TBC1D1-204ENST00000405444 BAZ2AQ9UIF9 1905 aaKnown RBP20.27■□□□□ 0.84
TBC1D1-204ENST00000405444 TTC41PQ6P2S7 1318 aa20.27■□□□□ 0.83
TBC1D1-204ENST00000405444 SPDYE16A6NNV3 312 aaPredicted RBP20.26■□□□□ 0.83
TBC1D1-204ENST00000405444 USP17L12C9JPN9 530 aa20.26■□□□□ 0.83
TBC1D1-204ENST00000405444 USP17L21D6R901 530 aa20.26■□□□□ 0.83
TBC1D1-204ENST00000405444 CDK8P49336 464 aa20.26■□□□□ 0.83
TBC1D1-204ENST00000405444 ICA1Q05084 483 aa20.26■□□□□ 0.83
TBC1D1-204ENST00000405444 COG2Q14746 738 aa20.26■□□□□ 0.83
TBC1D1-204ENST00000405444 POTEEQ6S8J3 1075 aa20.26■□□□□ 0.83
TBC1D1-204ENST00000405444 MB21D1Q8N884 522 aa20.26■□□□□ 0.83
TBC1D1-204ENST00000405444 SLC44A5Q8NCS7 719 aa20.26■□□□□ 0.83
TBC1D1-204ENST00000405444 DYNLL2Q96FJ2 89 aa20.26■□□□□ 0.83
TBC1D1-204ENST00000405444 PUS7LQ9H0K6 701 aaKnown RBP20.26■□□□□ 0.83
TBC1D1-204ENST00000405444 A0A1W2PRG0 241 aa20.25■□□□□ 0.83
TBC1D1-204ENST00000405444 SLC15A5A6NIM6 579 aa20.25■□□□□ 0.83
TBC1D1-204ENST00000405444 H0YGN5 161 aa20.25■□□□□ 0.83
TBC1D1-204ENST00000405444 ERC2O15083 957 aa20.25■□□□□ 0.83
TBC1D1-204ENST00000405444 SLFNL1Q499Z3 407 aa20.25■□□□□ 0.83
TBC1D1-204ENST00000405444 APPBP2Q92624 585 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms