RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 SLC4A8Q2Y0W8 1093 aa24.53■■□□□ 1.52
TPM1-208ENST00000404484 IFIT1BQ5T764 474 aaKnown RBP24.53■■□□□ 1.52
TPM1-208ENST00000404484 LARP1BQ659C4 914 aaKnown RBP24.53■■□□□ 1.52
TPM1-208ENST00000404484 DYNLL2Q96FJ2 89 aa24.53■■□□□ 1.52
TPM1-208ENST00000404484 DEFB129Q9H1M3 183 aa24.53■■□□□ 1.52
TPM1-208ENST00000404484 VEZTQ9HBM0 779 aa24.53■■□□□ 1.52
TPM1-208ENST00000404484 NCOA5Q9HCD5 579 aaKnown RBP24.53■■□□□ 1.52
TPM1-208ENST00000404484 GBA2Q9HCG7 927 aaPredicted RBP24.53■■□□□ 1.52
TPM1-208ENST00000404484 ZDHHC9Q9Y397 364 aa24.53■■□□□ 1.52
TPM1-208ENST00000404484 GOLGA8AA7E2F4 631 aa24.52■■□□□ 1.52
TPM1-208ENST00000404484 DDX11L8A8MPP1 907 aa24.52■■□□□ 1.52
TPM1-208ENST00000404484 VEGFBP49765 207 aa24.52■■□□□ 1.52
TPM1-208ENST00000404484 NBR1Q14596 966 aa24.52■■□□□ 1.52
TPM1-208ENST00000404484 PPP2R5BQ15173 497 aa24.52■■□□□ 1.52
TPM1-208ENST00000404484 SPDYE2Q495Y8 402 aa24.52■■□□□ 1.52
TPM1-208ENST00000404484 MICU3Q86XE3 530 aa24.52■■□□□ 1.52
TPM1-208ENST00000404484 ENAHQ8N8S7 591 aaPredicted RBP24.52■■□□□ 1.52
TPM1-208ENST00000404484 JMYQ8N9B5 988 aa24.52■■□□□ 1.52
TPM1-208ENST00000404484 DHX36Q9H2U1 1008 aaKnown RBP24.52■■□□□ 1.52
TPM1-208ENST00000404484 DDX4Q9NQI0 724 aaKnown RBP24.52■■□□□ 1.52
TPM1-208ENST00000404484 TMOD2Q9NZR1 351 aa24.52■■□□□ 1.52
TPM1-208ENST00000404484 CCDC196A0A1B0GTZ2 297 aa24.51■■□□□ 1.51
TPM1-208ENST00000404484 JAK2O60674 1132 aa24.51■■□□□ 1.51
TPM1-208ENST00000404484 ZSCAN22P10073 491 aaPredicted RBP24.51■■□□□ 1.51
TPM1-208ENST00000404484 PTMSP20962 102 aa24.51■■□□□ 1.51
TPM1-208ENST00000404484 MCM4P33991 863 aa24.51■■□□□ 1.51
TPM1-208ENST00000404484 C2orf69Q8N8R5 385 aa24.51■■□□□ 1.51
TPM1-208ENST00000404484 SWAP70Q9UH65 585 aa24.51■■□□□ 1.51
TPM1-208ENST00000404484 GOLGA6L22H0YM25 854 aa24.5■■□□□ 1.51
TPM1-208ENST00000404484 CTDNEP1O95476 244 aa24.5■■□□□ 1.51
TPM1-208ENST00000404484 CALM1P0DP23 149 aa24.5■■□□□ 1.51
TPM1-208ENST00000404484 CALM2P0DP24 149 aa24.5■■□□□ 1.51
TPM1-208ENST00000404484 CALM3P0DP25 149 aa24.5■■□□□ 1.51
TPM1-208ENST00000404484 CDK8P49336 464 aa24.5■■□□□ 1.51
TPM1-208ENST00000404484 TFAP4Q01664 338 aa24.5■■□□□ 1.51
TPM1-208ENST00000404484 CATIPQ7Z7H3 387 aa24.5■■□□□ 1.51
TPM1-208ENST00000404484 ZNF654Q8IZM8 581 aa24.5■■□□□ 1.51
TPM1-208ENST00000404484 SENP2Q9HC62 589 aa24.5■■□□□ 1.51
TPM1-208ENST00000404484 TCP11L1Q9NUJ3 509 aa24.5■■□□□ 1.51
TPM1-208ENST00000404484 ATP6V1DQ9Y5K8 247 aa24.5■■□□□ 1.51
TPM1-208ENST00000404484 TSPY3P0CV98 308 aa24.5■■□□□ 1.51
TPM1-208ENST00000404484 TSPY8P0CW00 308 aa24.5■■□□□ 1.51
TPM1-208ENST00000404484 FAM47AQ5JRC9 791 aa24.5■■□□□ 1.51
TPM1-208ENST00000404484 EHD4Q9H223 541 aa24.5■■□□□ 1.51
TPM1-208ENST00000404484 ENTPD3O75355 529 aa24.49■■□□□ 1.51
TPM1-208ENST00000404484 RASA1P20936 1047 aa24.49■■□□□ 1.51
TPM1-208ENST00000404484 HUNKP57058 714 aa24.49■■□□□ 1.51
TPM1-208ENST00000404484 ANP32EQ9BTT0 268 aa24.49■■□□□ 1.51
TPM1-208ENST00000404484 SERPINB13Q9UIV8 391 aa24.49■■□□□ 1.51
TPM1-208ENST00000404484 COL2A1P02458 1487 aaPredicted RBP24.48■■□□□ 1.51
TPM1-208ENST00000404484 DDAH1O94760 285 aa24.48■■□□□ 1.51
TPM1-208ENST00000404484 BAG4O95429 457 aaKnown RBP24.48■■□□□ 1.51
TPM1-208ENST00000404484 GABPAQ06546 454 aa24.48■■□□□ 1.51
TPM1-208ENST00000404484 NFIAQ12857 509 aa24.48■■□□□ 1.51
TPM1-208ENST00000404484 RASA3Q14644 834 aa24.48■■□□□ 1.51
TPM1-208ENST00000404484 RTN1Q16799 776 aa24.48■■□□□ 1.51
TPM1-208ENST00000404484 CYP4F22Q6NT55 531 aa24.48■■□□□ 1.51
TPM1-208ENST00000404484 DGKHQ86XP1 1220 aa24.48■■□□□ 1.51
TPM1-208ENST00000404484 DDX11Q96FC9 970 aa24.48■■□□□ 1.51
TPM1-208ENST00000404484 MTMR6Q9Y217 621 aa24.48■■□□□ 1.51
TPM1-208ENST00000404484 VPS37CA5D8V6 355 aaPredicted RBP24.47■■□□□ 1.51
TPM1-208ENST00000404484 TCP10L2B9ZVM9 353 aa24.47■■□□□ 1.51
TPM1-208ENST00000404484 PAXIP1Q6ZW49 1069 aaPredicted RBP24.47■■□□□ 1.51
TPM1-208ENST00000404484 MOB2Q70IA6 237 aa24.47■■□□□ 1.51
TPM1-208ENST00000404484 SLC44A5Q8NCS7 719 aa24.47■■□□□ 1.51
TPM1-208ENST00000404484 ANKS1AQ92625 1134 aa24.47■■□□□ 1.51
TPM1-208ENST00000404484 HHIPL1Q96JK4 782 aa24.47■■□□□ 1.51
TPM1-208ENST00000404484 CACNB3P54284 484 aa24.46■■□□□ 1.51
TPM1-208ENST00000404484 CAPNS2Q96L46 248 aa24.46■■□□□ 1.51
TPM1-208ENST00000404484 FAM198AQ9UFP1 575 aa24.46■■□□□ 1.51
TPM1-208ENST00000404484 PPP2R3BQ9Y5P8 575 aa24.46■■□□□ 1.51
TPM1-208ENST00000404484 H3BQV1 296 aa24.46■■□□□ 1.51
TPM1-208ENST00000404484 F13A1P00488 732 aa24.46■■□□□ 1.51
TPM1-208ENST00000404484 IFFO2Q5TF58 517 aa24.46■■□□□ 1.51
TPM1-208ENST00000404484 RAB11FIP4Q86YS3 637 aa24.46■■□□□ 1.51
TPM1-208ENST00000404484 RGS22Q8NE09 1264 aa24.46■■□□□ 1.51
TPM1-208ENST00000404484 NEDD1Q8NHV4 660 aa24.46■■□□□ 1.51
TPM1-208ENST00000404484 RBM28Q9NW13 759 aaKnown RBP24.46■■□□□ 1.51
TPM1-208ENST00000404484 PI4KBQ9UBF8 816 aa24.46■■□□□ 1.51
TPM1-208ENST00000404484 PLIN4Q96Q06 1357 aa24.45■■□□□ 1.5
TPM1-208ENST00000404484 FKBP1BP68106 108 aa24.45■■□□□ 1.5
TPM1-208ENST00000404484 GRM1Q13255 1194 aa24.45■■□□□ 1.5
TPM1-208ENST00000404484 TNFAIP1Q13829 316 aa24.45■■□□□ 1.5
TPM1-208ENST00000404484 FOXD4L5Q5VV16 416 aaPredicted RBP24.45■■□□□ 1.5
TPM1-208ENST00000404484 FKBP1CQ5VVH2 108 aa24.45■■□□□ 1.5
TPM1-208ENST00000404484 FANCBQ8NB91 859 aa24.45■■□□□ 1.5
TPM1-208ENST00000404484 FOXD4L4Q8WXT5 416 aaPredicted RBP24.45■■□□□ 1.5
TPM1-208ENST00000404484 MYL10Q9BUA6 226 aa24.45■■□□□ 1.5
TPM1-208ENST00000404484 ORC3Q9UBD5 711 aaPredicted RBP24.45■■□□□ 1.5
TPM1-208ENST00000404484 STK36Q9NRP7 1315 aa24.44■■□□□ 1.5
TPM1-208ENST00000404484 ATRNL1Q5VV63 1379 aa24.44■■□□□ 1.5
TPM1-208ENST00000404484 RXRAP19793 462 aa24.44■■□□□ 1.5
TPM1-208ENST00000404484 NF2P35240 595 aa24.44■■□□□ 1.5
TPM1-208ENST00000404484 ADD1P35611 737 aaKnown RBP24.44■■□□□ 1.5
TPM1-208ENST00000404484 NBPF12Q5TAG4 269 aaPredicted RBP24.44■■□□□ 1.5
TPM1-208ENST00000404484 NUP133Q8WUM0 1156 aa24.44■■□□□ 1.5
TPM1-208ENST00000404484 KAT14Q9H8E8 782 aa24.44■■□□□ 1.5
TPM1-208ENST00000404484 CDC27P30260 824 aa24.43■■□□□ 1.5
TPM1-208ENST00000404484 ECE1P42892 770 aa24.43■■□□□ 1.5
TPM1-208ENST00000404484 PRKG1Q13976 671 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms