RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 UBXN1Q04323 297 aa10.83□□□□□ -0.68
SMC1B-202ENST00000404354 KRT31Q15323 416 aa10.83□□□□□ -0.68
SMC1B-202ENST00000404354 CTR9Q6PD62 1173 aa10.83□□□□□ -0.68
SMC1B-202ENST00000404354 SMARCC1Q92922 1105 aaPredicted RBP10.83□□□□□ -0.68
SMC1B-202ENST00000404354 PAGE5Q96GU1 130 aa10.83□□□□□ -0.68
SMC1B-202ENST00000404354 SMARCAL1Q9NZC9 954 aa10.83□□□□□ -0.68
SMC1B-202ENST00000404354 KDM3BQ7LBC6 1761 aa10.82□□□□□ -0.68
SMC1B-202ENST00000404354 PDE6AP16499 860 aa10.82□□□□□ -0.68
SMC1B-202ENST00000404354 SPATA1Q5VX52 437 aa10.82□□□□□ -0.68
SMC1B-202ENST00000404354 APTXQ7Z2E3 356 aaKnown RBP10.82□□□□□ -0.68
SMC1B-202ENST00000404354 DHX37Q8IY37 1157 aaKnown RBP10.82□□□□□ -0.68
SMC1B-202ENST00000404354 RASSF8Q8NHQ8 419 aa10.82□□□□□ -0.68
SMC1B-202ENST00000404354 PCMTD1Q96MG8 357 aaPredicted RBP10.82□□□□□ -0.68
SMC1B-202ENST00000404354 GNL3LQ9NVN8 582 aaKnown RBP10.82□□□□□ -0.68
SMC1B-202ENST00000404354 GDAQ9Y2T3 454 aa10.82□□□□□ -0.68
SMC1B-202ENST00000404354 SAMM50Q9Y512 469 aa10.82□□□□□ -0.68
SMC1B-202ENST00000404354 LTN1O94822 1766 aa10.82□□□□□ -0.68
SMC1B-202ENST00000404354 ZPR1O75312 459 aa10.82□□□□□ -0.68
SMC1B-202ENST00000404354 ADD2P35612 726 aa10.82□□□□□ -0.68
SMC1B-202ENST00000404354 GGCXP38435 758 aa10.82□□□□□ -0.68
SMC1B-202ENST00000404354 JRKLQ9Y4A0 524 aa10.82□□□□□ -0.68
SMC1B-202ENST00000404354 V9GY48 417 aaPredicted RBP10.82□□□□□ -0.68
SMC1B-202ENST00000404354 N4BP2Q86UW6 1770 aaPredicted RBP10.82□□□□□ -0.68
SMC1B-202ENST00000404354 SLIT1O75093 1534 aa10.82□□□□□ -0.68
SMC1B-202ENST00000404354 CYP2D7A0A087X1C5 515 aa10.82□□□□□ -0.68
SMC1B-202ENST00000404354 LOC102724159A0A0B4J2E5 919 aa10.82□□□□□ -0.68
SMC1B-202ENST00000404354 SARSP49591 514 aaKnown RBP10.82□□□□□ -0.68
SMC1B-202ENST00000404354 PWP2Q15269 919 aaKnown RBP10.82□□□□□ -0.68
SMC1B-202ENST00000404354 CCDC122Q5T0U0 273 aa10.82□□□□□ -0.68
SMC1B-202ENST00000404354 MFSD6Q6ZSS7 791 aa10.82□□□□□ -0.68
SMC1B-202ENST00000404354 CCDC148Q8NFR7 591 aa10.82□□□□□ -0.68
SMC1B-202ENST00000404354 SMCR8Q8TEV9 937 aaPredicted RBP10.82□□□□□ -0.68
SMC1B-202ENST00000404354 PANX2Q96RD6 677 aa10.82□□□□□ -0.68
SMC1B-202ENST00000404354 EPB41L4AQ9HCS5 686 aaPredicted RBP10.82□□□□□ -0.68
SMC1B-202ENST00000404354 JADE2Q9NQC1 790 aa10.82□□□□□ -0.68
SMC1B-202ENST00000404354 CPDO75976 1380 aa10.81□□□□□ -0.68
SMC1B-202ENST00000404354 RFX7Q2KHR2 1363 aa10.81□□□□□ -0.68
SMC1B-202ENST00000404354 IVLP07476 585 aa10.81□□□□□ -0.68
SMC1B-202ENST00000404354 ITGA6P23229 1130 aa10.81□□□□□ -0.68
SMC1B-202ENST00000404354 SLC7A5Q01650 507 aa10.81□□□□□ -0.68
SMC1B-202ENST00000404354 WTAPQ15007 396 aa10.81□□□□□ -0.68
SMC1B-202ENST00000404354 EZH2Q15910 746 aaKnown RBP10.81□□□□□ -0.68
SMC1B-202ENST00000404354 RASGRP2Q7LDG7 609 aa10.81□□□□□ -0.68
SMC1B-202ENST00000404354 IFNL3Q8IZI9 196 aa10.81□□□□□ -0.68
SMC1B-202ENST00000404354 AFAP1L1Q8TED9 768 aa10.81□□□□□ -0.68
SMC1B-202ENST00000404354 SDR42E1Q8WUS8 393 aa10.81□□□□□ -0.68
SMC1B-202ENST00000404354 CXCR5P32302 372 aa10.81□□□□□ -0.68
SMC1B-202ENST00000404354 ARHGAP25P42331 645 aa10.81□□□□□ -0.68
SMC1B-202ENST00000404354 C2orf54Q08AI8 447 aa10.81□□□□□ -0.68
SMC1B-202ENST00000404354 TCIRG1Q13488 830 aa10.81□□□□□ -0.68
SMC1B-202ENST00000404354 CUL4BQ13620 913 aa10.81□□□□□ -0.68
SMC1B-202ENST00000404354 PAXIP1Q6ZW49 1069 aaPredicted RBP10.81□□□□□ -0.68
SMC1B-202ENST00000404354 DCAF5Q96JK2 942 aa10.81□□□□□ -0.68
SMC1B-202ENST00000404354 ABHD10Q9NUJ1 306 aa10.81□□□□□ -0.68
SMC1B-202ENST00000404354 MED1Q15648 1581 aaPredicted RBP10.81□□□□□ -0.68
SMC1B-202ENST00000404354 MCM7P33993 719 aa10.81□□□□□ -0.68
SMC1B-202ENST00000404354 RILPL1Q5EBL4 403 aa10.81□□□□□ -0.68
SMC1B-202ENST00000404354 TOM1L2Q6ZVM7 507 aa10.81□□□□□ -0.68
SMC1B-202ENST00000404354 KIAA1328Q86T90 577 aa10.81□□□□□ -0.68
SMC1B-202ENST00000404354 CRACR2AQ9BSW2 395 aa10.81□□□□□ -0.68
SMC1B-202ENST00000404354 EHD2Q9NZN4 543 aa10.81□□□□□ -0.68
SMC1B-202ENST00000404354 TBC1D2BQ9UPU7 963 aa10.81□□□□□ -0.68
SMC1B-202ENST00000404354 MYH15Q9Y2K3 1946 aa10.8□□□□□ -0.68
SMC1B-202ENST00000404354 ERICH2A1L162 156 aa10.8□□□□□ -0.68
SMC1B-202ENST00000404354 TRIM75PA6NK02 468 aa10.8□□□□□ -0.68
SMC1B-202ENST00000404354 FMNL1O95466 1100 aaPredicted RBP10.8□□□□□ -0.68
SMC1B-202ENST00000404354 SYF2O95926 243 aaKnown RBP10.8□□□□□ -0.68
SMC1B-202ENST00000404354 KLK7P49862 253 aa10.8□□□□□ -0.68
SMC1B-202ENST00000404354 ICE2Q659A1 982 aa10.8□□□□□ -0.68
SMC1B-202ENST00000404354 CNGA4Q8IV77 575 aa10.8□□□□□ -0.68
SMC1B-202ENST00000404354 MSANTD4Q8NCY6 345 aa10.8□□□□□ -0.68
SMC1B-202ENST00000404354 GPR108Q9NPR9 543 aa10.8□□□□□ -0.68
SMC1B-202ENST00000404354 RAB21Q9UL25 225 aa10.8□□□□□ -0.68
SMC1B-202ENST00000404354 EPN1Q9Y6I3 576 aaPredicted RBP10.8□□□□□ -0.68
SMC1B-202ENST00000404354 PPP1R3GB7ZBB8 358 aa10.8□□□□□ -0.68
SMC1B-202ENST00000404354 VEGFAP15692 232 aaPredicted RBP10.8□□□□□ -0.68
SMC1B-202ENST00000404354 KCTD16Q68DU8 428 aa10.8□□□□□ -0.68
SMC1B-202ENST00000404354 HDAC7Q8WUI4 952 aa10.8□□□□□ -0.68
SMC1B-202ENST00000404354 SHISA4Q96DD7 197 aa10.8□□□□□ -0.68
SMC1B-202ENST00000404354 STRBPQ96SI9 672 aaKnown RBP10.8□□□□□ -0.68
SMC1B-202ENST00000404354 ABCF2Q9UG63 623 aa10.8□□□□□ -0.68
SMC1B-202ENST00000404354 SRPRBQ9Y5M8 271 aaKnown RBP10.8□□□□□ -0.68
SMC1B-202ENST00000404354 SLC4A4Q9Y6R1 1079 aa10.8□□□□□ -0.68
SMC1B-202ENST00000404354 UBR1Q8IWV7 1749 aa10.8□□□□□ -0.68
SMC1B-202ENST00000404354 TTC26A0AVF1 554 aa10.79□□□□□ -0.68
SMC1B-202ENST00000404354 PIP4K2BP78356 416 aa10.79□□□□□ -0.68
SMC1B-202ENST00000404354 FBXW10Q5XX13 1052 aa10.79□□□□□ -0.68
SMC1B-202ENST00000404354 ANKRD13CQ8N6S4 541 aa10.79□□□□□ -0.68
SMC1B-202ENST00000404354 FAM71BQ8TC56 605 aa10.79□□□□□ -0.68
SMC1B-202ENST00000404354 FAM170AA1A519 330 aa10.79□□□□□ -0.68
SMC1B-202ENST00000404354 ADAMTS3O15072 1205 aa10.79□□□□□ -0.68
SMC1B-202ENST00000404354 MAGEA9P43362 315 aa10.79□□□□□ -0.68
SMC1B-202ENST00000404354 STIM1Q13586 685 aa10.79□□□□□ -0.68
SMC1B-202ENST00000404354 RRP36Q96EU6 259 aaKnown RBP10.79□□□□□ -0.68
SMC1B-202ENST00000404354 LACRTQ9GZZ8 138 aa10.79□□□□□ -0.68
SMC1B-202ENST00000404354 STRN4Q9NRL3 753 aa10.79□□□□□ -0.68
SMC1B-202ENST00000404354 PSD3Q9NYI0 1048 aa10.79□□□□□ -0.68
SMC1B-202ENST00000404354 REXO2Q9Y3B8 237 aaKnown RBP10.79□□□□□ -0.68
SMC1B-202ENST00000404354 SRCAPQ6ZRS2 3230 aa10.79□□□□□ -0.68
SMC1B-202ENST00000404354 PLEKHG2Q9H7P9 1386 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms