RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 B4E1Z4 1266 aa34.68■■■■□ 3.14
USP42-202ENST00000404008 RASEFQ8IZ41 740 aa34.68■■■■□ 3.14
USP42-202ENST00000404008 ZNF280CQ8ND82 737 aa34.68■■■■□ 3.14
USP42-202ENST00000404008 TRDNQ13061 729 aa34.67■■■■□ 3.14
USP42-202ENST00000404008 TSGA10IPQ3SY00 556 aa34.67■■■■□ 3.14
USP42-202ENST00000404008 CLEC10AQ8IUN9 316 aa34.67■■■■□ 3.14
USP42-202ENST00000404008 KANSL2Q9H9L4 492 aa34.67■■■■□ 3.14
USP42-202ENST00000404008 KCNH4Q9UQ05 1017 aa34.67■■■■□ 3.14
USP42-202ENST00000404008 KDM4AO75164 1064 aa34.66■■■■□ 3.14
USP42-202ENST00000404008 ZKSCAN1P17029 563 aaPredicted RBP34.66■■■■□ 3.14
USP42-202ENST00000404008 ICA1Q05084 483 aa34.66■■■■□ 3.14
USP42-202ENST00000404008 NOGQ13253 232 aa34.66■■■■□ 3.14
USP42-202ENST00000404008 SPP2Q13103 211 aa34.65■■■■□ 3.14
USP42-202ENST00000404008 NCOA7Q8NI08 942 aa34.65■■■■□ 3.14
USP42-202ENST00000404008 CEP95Q96GE4 821 aa34.65■■■■□ 3.14
USP42-202ENST00000404008 TRIM75PA6NK02 468 aa34.64■■■■□ 3.14
USP42-202ENST00000404008 CXCL11O14625 94 aa34.64■■■■□ 3.14
USP42-202ENST00000404008 AOC2O75106 756 aa34.64■■■■□ 3.14
USP42-202ENST00000404008 SIAH1Q8IUQ4 282 aa34.64■■■■□ 3.14
USP42-202ENST00000404008 IL17RBQ9NRM6 502 aa34.64■■■■□ 3.14
USP42-202ENST00000404008 LOC285556D6RIA3 1793 aa34.64■■■■□ 3.14
USP42-202ENST00000404008 MCCP23508 829 aa34.63■■■■□ 3.13
USP42-202ENST00000404008 RALYLQ86SE5 291 aaKnown RBP34.63■■■■□ 3.13
USP42-202ENST00000404008 TCP11L1Q9NUJ3 509 aa34.63■■■■□ 3.13
USP42-202ENST00000404008 MTMR4Q9NYA4 1195 aa34.63■■■■□ 3.13
USP42-202ENST00000404008 ZSWIM5Q9P217 1185 aa34.63■■■■□ 3.13
USP42-202ENST00000404008 SNX14Q9Y5W7 946 aa34.63■■■■□ 3.13
USP42-202ENST00000404008 PCNTO95613 3336 aa34.63■■■■□ 3.13
USP42-202ENST00000404008 NMT2O60551 498 aa34.62■■■■□ 3.13
USP42-202ENST00000404008 GTF2A2P52657 109 aa34.62■■■■□ 3.13
USP42-202ENST00000404008 SNAPC2Q13487 334 aa34.62■■■■□ 3.13
USP42-202ENST00000404008 DNAJC5GQ8N7S2 189 aa34.62■■■■□ 3.13
USP42-202ENST00000404008 ACER1Q8TDN7 264 aa34.62■■■■□ 3.13
USP42-202ENST00000404008 MS4A4AQ96JQ5 239 aa34.62■■■■□ 3.13
USP42-202ENST00000404008 ZIC5Q96T25 663 aa34.62■■■■□ 3.13
USP42-202ENST00000404008 EEF2P13639 858 aaKnown RBP34.62■■■■□ 3.13
USP42-202ENST00000404008 KRT32Q14532 448 aa34.62■■■■□ 3.13
USP42-202ENST00000404008 ARHGEF10LQ9HCE6 1279 aa34.62■■■■□ 3.13
USP42-202ENST00000404008 A0A0G2JLL6 359 aaPredicted RBP34.61■■■■□ 3.13
USP42-202ENST00000404008 A0A1W2PRG0 241 aa34.61■■■■□ 3.13
USP42-202ENST00000404008 USP17L10C9JJH3 530 aa34.61■■■■□ 3.13
USP42-202ENST00000404008 BACE1P56817 501 aa34.61■■■■□ 3.13
USP42-202ENST00000404008 MTMR2Q13614 643 aa34.61■■■■□ 3.13
USP42-202ENST00000404008 CYB5R4Q7L1T6 521 aa34.61■■■■□ 3.13
USP42-202ENST00000404008 PRRT2Q7Z6L0 340 aaPredicted RBP34.61■■■■□ 3.13
USP42-202ENST00000404008 MB21D2Q8IYB1 491 aaPredicted RBP34.61■■■■□ 3.13
USP42-202ENST00000404008 NYAP2Q9P242 653 aa34.61■■■■□ 3.13
USP42-202ENST00000404008 MANSC4A6NHS7 340 aaPredicted RBP34.6■■■■□ 3.13
USP42-202ENST00000404008 KIF23Q02241 960 aaPredicted RBP34.6■■■■□ 3.13
USP42-202ENST00000404008 ADCK5Q3MIX3 580 aa34.6■■■■□ 3.13
USP42-202ENST00000404008 TTLL1O95922 423 aa34.59■■■■□ 3.13
USP42-202ENST00000404008 MAP2K2P36507 400 aa34.59■■■■□ 3.13
USP42-202ENST00000404008 NOVP48745 357 aa34.59■■■■□ 3.13
USP42-202ENST00000404008 ATP2B2Q01814 1243 aa34.59■■■■□ 3.13
USP42-202ENST00000404008 PPP4R3BQ5MIZ7 849 aa34.59■■■■□ 3.13
USP42-202ENST00000404008 IQCA1Q86XH1 822 aa34.59■■■■□ 3.13
USP42-202ENST00000404008 ZKSCAN3Q9BRR0 538 aa34.59■■■■□ 3.13
USP42-202ENST00000404008 KIAA1683Q9H0B3 1180 aa34.59■■■■□ 3.13
USP42-202ENST00000404008 CETPP11597 493 aa34.58■■■■□ 3.13
USP42-202ENST00000404008 SH3D19Q5HYK7 790 aa34.58■■■■□ 3.13
USP42-202ENST00000404008 FEZ1Q99689 392 aa34.58■■■■□ 3.13
USP42-202ENST00000404008 SH2D4AQ9H788 454 aa34.58■■■■□ 3.13
USP42-202ENST00000404008 TMX2Q9Y320 296 aa34.58■■■■□ 3.13
USP42-202ENST00000404008 TESPA1A2RU30 521 aaPredicted RBP34.57■■■■□ 3.12
USP42-202ENST00000404008 C19orf81C9J6K1 198 aa34.57■■■■□ 3.12
USP42-202ENST00000404008 MOGSQ13724 837 aa34.57■■■■□ 3.12
USP42-202ENST00000404008 COL9A3Q14050 684 aaPredicted RBP34.57■■■■□ 3.12
USP42-202ENST00000404008 NEK1Q96PY6 1258 aa34.57■■■■□ 3.12
USP42-202ENST00000404008 ZSCAN10Q96SZ4 725 aaPredicted RBP34.57■■■■□ 3.12
USP42-202ENST00000404008 BACH2Q9BYV9 841 aa34.57■■■■□ 3.12
USP42-202ENST00000404008 CLIP2Q9UDT6 1046 aa34.57■■■■□ 3.12
USP42-202ENST00000404008 STX8Q9UNK0 236 aa34.57■■■■□ 3.12
USP42-202ENST00000404008 CCL15-CCL14A0A0B4J2E2 113 aa34.56■■■■□ 3.12
USP42-202ENST00000404008 HMGCS2P54868 508 aa34.56■■■■□ 3.12
USP42-202ENST00000404008 CCL15Q16663 113 aa34.56■■■■□ 3.12
USP42-202ENST00000404008 BRI3BPQ8WY22 251 aa34.56■■■■□ 3.12
USP42-202ENST00000404008 MKL1Q969V6 931 aa34.56■■■■□ 3.12
USP42-202ENST00000404008 USP14P54578 494 aa34.55■■■■□ 3.12
USP42-202ENST00000404008 INHBEP58166 350 aa34.55■■■■□ 3.12
USP42-202ENST00000404008 ANTXR2P58335 489 aa34.55■■■■□ 3.12
USP42-202ENST00000404008 SREBF2Q12772 1141 aa34.55■■■■□ 3.12
USP42-202ENST00000404008 DGKZQ13574 1117 aa34.55■■■■□ 3.12
USP42-202ENST00000404008 RCSD1Q6JBY9 416 aa34.55■■■■□ 3.12
USP42-202ENST00000404008 UBAC1Q9BSL1 405 aa34.55■■■■□ 3.12
USP42-202ENST00000404008 MCM5P33992 734 aa34.54■■■■□ 3.12
USP42-202ENST00000404008 ZYXQ15942 572 aaKnown RBP34.54■■■■□ 3.12
USP42-202ENST00000404008 CCDC178Q5BJE1 867 aa34.54■■■■□ 3.12
USP42-202ENST00000404008 USP17L2Q6R6M4 530 aa34.54■■■■□ 3.12
USP42-202ENST00000404008 CHST3Q7LGC8 479 aa34.54■■■■□ 3.12
USP42-202ENST00000404008 REM2Q8IYK8 340 aaPredicted RBP34.54■■■■□ 3.12
USP42-202ENST00000404008 TTC14Q96N46 770 aa34.54■■■■□ 3.12
USP42-202ENST00000404008 TNKSO95271 1327 aa34.54■■■■□ 3.12
USP42-202ENST00000404008 TM4SF4P48230 202 aa34.53■■■■□ 3.12
USP42-202ENST00000404008 FASTKD5Q7L8L6 764 aaKnown RBP34.53■■■■□ 3.12
USP42-202ENST00000404008 ENAHQ8N8S7 591 aaPredicted RBP34.53■■■■□ 3.12
USP42-202ENST00000404008 PROCA1Q8NCQ7 364 aaPredicted RBP34.53■■■■□ 3.12
USP42-202ENST00000404008 JAKMIP1Q96N16 626 aaKnown RBP34.53■■■■□ 3.12
USP42-202ENST00000404008 EMILIN3Q9NT22 766 aa34.53■■■■□ 3.12
USP42-202ENST00000404008 SYNPO2Q9UMS6 1093 aa34.53■■■■□ 3.12
USP42-202ENST00000404008 ANAPC15P60006 121 aa34.52■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms