RNA–Protein interactions for RNA: ENST00000402550.5

CGREF1-204, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 2 BASIC

Gene CGREF1, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-204ENST00000402550 KDM4AO75164 1064 aa31.64■■■□□ 2.65
CGREF1-204ENST00000402550 ZBTB48P10074 688 aaPredicted RBP31.64■■■□□ 2.65
CGREF1-204ENST00000402550 SEPT2Q15019 361 aa31.64■■■□□ 2.65
CGREF1-204ENST00000402550 RAB3GAP1Q15042 981 aa31.64■■■□□ 2.65
CGREF1-204ENST00000402550 TMEM179Q6ZVK1 233 aa31.64■■■□□ 2.65
CGREF1-204ENST00000402550 GNL3Q9BVP2 549 aaKnown RBP eCLIP31.64■■■□□ 2.65
CGREF1-204ENST00000402550 CYP46A1Q9Y6A2 500 aa31.64■■■□□ 2.65
CGREF1-204ENST00000402550 TSPY3P0CV98 308 aa31.63■■■□□ 2.65
CGREF1-204ENST00000402550 TSPY8P0CW00 308 aa31.63■■■□□ 2.65
CGREF1-204ENST00000402550 MCM5P33992 734 aa31.63■■■□□ 2.65
CGREF1-204ENST00000402550 TFAP4Q01664 338 aa31.63■■■□□ 2.65
CGREF1-204ENST00000402550 MKRN3Q13064 507 aaKnown RBP31.63■■■□□ 2.65
CGREF1-204ENST00000402550 FAM47AQ5JRC9 791 aa31.63■■■□□ 2.65
CGREF1-204ENST00000402550 DNAJC5GQ8N7S2 189 aa31.63■■■□□ 2.65
CGREF1-204ENST00000402550 AFG3L2Q9Y4W6 797 aa31.63■■■□□ 2.65
CGREF1-204ENST00000402550 WDR33Q9C0J8 1336 aaKnown RBP31.63■■■□□ 2.65
CGREF1-204ENST00000402550 PPIL2Q13356 520 aa31.62■■■□□ 2.65
CGREF1-204ENST00000402550 RABEP1Q15276 862 aa31.61■■■□□ 2.65
CGREF1-204ENST00000402550 RUFY3Q7L099 469 aa31.61■■■□□ 2.65
CGREF1-204ENST00000402550 DHX32Q7L7V1 743 aaKnown RBP31.61■■■□□ 2.65
CGREF1-204ENST00000402550 KIF2CQ99661 725 aa31.61■■■□□ 2.65
CGREF1-204ENST00000402550 ZSWIM6Q9HCJ5 1215 aa31.61■■■□□ 2.65
CGREF1-204ENST00000402550 IQCA1Q86XH1 822 aa31.6■■■□□ 2.65
CGREF1-204ENST00000402550 MB21D2Q8IYB1 491 aaPredicted RBP31.6■■■□□ 2.65
CGREF1-204ENST00000402550 NEDD1Q8NHV4 660 aa31.6■■■□□ 2.65
CGREF1-204ENST00000402550 NKX2-3Q8TAU0 364 aa31.6■■■□□ 2.65
CGREF1-204ENST00000402550 ZSWIM5Q9P217 1185 aa31.6■■■□□ 2.65
CGREF1-204ENST00000402550 PHIPQ8WWQ0 1821 aa31.6■■■□□ 2.65
CGREF1-204ENST00000402550 PCNTO95613 3336 aa31.6■■■□□ 2.65
CGREF1-204ENST00000402550 SPP2Q13103 211 aa31.6■■■□□ 2.65
CGREF1-204ENST00000402550 NOGQ13253 232 aa31.6■■■□□ 2.65
CGREF1-204ENST00000402550 ZNF280CQ8ND82 737 aa31.6■■■□□ 2.65
CGREF1-204ENST00000402550 ZIC5Q96T25 663 aa31.6■■■□□ 2.65
CGREF1-204ENST00000402550 WDR18Q9BV38 432 aa31.6■■■□□ 2.65
CGREF1-204ENST00000402550 TBC1D2Q9BYX2 928 aa31.6■■■□□ 2.65
CGREF1-204ENST00000402550 UPF3BQ9BZI7 483 aaKnown RBP31.6■■■□□ 2.65
CGREF1-204ENST00000402550 SART3Q15020 963 aaKnown RBP31.59■■■□□ 2.65
CGREF1-204ENST00000402550 UBAC1Q9BSL1 405 aa31.59■■■□□ 2.65
CGREF1-204ENST00000402550 KANSL2Q9H9L4 492 aa31.59■■■□□ 2.65
CGREF1-204ENST00000402550 AS3MTQ9HBK9 375 aa31.59■■■□□ 2.65
CGREF1-204ENST00000402550 AOC2O75106 756 aa31.58■■■□□ 2.65
CGREF1-204ENST00000402550 RPS6KB1P23443 525 aa31.58■■■□□ 2.65
CGREF1-204ENST00000402550 SIAH1Q8IUQ4 282 aa31.58■■■□□ 2.65
CGREF1-204ENST00000402550 IL27Q8NEV9 243 aa31.58■■■□□ 2.65
CGREF1-204ENST00000402550 KCNH4Q9UQ05 1017 aa31.58■■■□□ 2.65
CGREF1-204ENST00000402550 WDR19Q8NEZ3 1342 aa31.57■■■□□ 2.64
CGREF1-204ENST00000402550 CLEC10AQ8IUN9 316 aa31.57■■■□□ 2.64
CGREF1-204ENST00000402550 MS4A4AQ96JQ5 239 aa31.57■■■□□ 2.64
CGREF1-204ENST00000402550 GREB1LQ9C091 1923 aaPredicted RBP31.56■■■□□ 2.64
CGREF1-204ENST00000402550 IGKV6D-41A0A0C4DH26 115 aa31.56■■■□□ 2.64
CGREF1-204ENST00000402550 ERICH2A1L162 156 aa31.56■■■□□ 2.64
CGREF1-204ENST00000402550 TRIM75PA6NK02 468 aa31.56■■■□□ 2.64
CGREF1-204ENST00000402550 CXCL11O14625 94 aa31.56■■■□□ 2.64
CGREF1-204ENST00000402550 PRC1O43663 620 aa31.56■■■□□ 2.64
CGREF1-204ENST00000402550 NEK4P51957 841 aa31.56■■■□□ 2.64
CGREF1-204ENST00000402550 FGD1P98174 961 aa31.56■■■□□ 2.64
CGREF1-204ENST00000402550 MAP2K2P36507 400 aa31.56■■■□□ 2.64
CGREF1-204ENST00000402550 KIF23Q02241 960 aaPredicted RBP31.56■■■□□ 2.64
CGREF1-204ENST00000402550 CCDC178Q5BJE1 867 aa31.56■■■□□ 2.64
CGREF1-204ENST00000402550 CYB5R4Q7L1T6 521 aa31.56■■■□□ 2.64
CGREF1-204ENST00000402550 CHST3Q7LGC8 479 aa31.56■■■□□ 2.64
CGREF1-204ENST00000402550 IL17RBQ9NRM6 502 aa31.56■■■□□ 2.64
CGREF1-204ENST00000402550 PLIN4Q96Q06 1357 aa31.55■■■□□ 2.64
CGREF1-204ENST00000402550 CPA1P15085 419 aa31.55■■■□□ 2.64
CGREF1-204ENST00000402550 GTF2A2P52657 109 aa31.55■■■□□ 2.64
CGREF1-204ENST00000402550 ICA1Q05084 483 aa31.55■■■□□ 2.64
CGREF1-204ENST00000402550 SNAPC2Q13487 334 aa31.55■■■□□ 2.64
CGREF1-204ENST00000402550 ACER1Q8TDN7 264 aa31.55■■■□□ 2.64
CGREF1-204ENST00000402550 CEP95Q96GE4 821 aa31.55■■■□□ 2.64
CGREF1-204ENST00000402550 TMEM87BQ96K49 555 aa31.55■■■□□ 2.64
CGREF1-204ENST00000402550 MTA3Q9BTC8 594 aa31.55■■■□□ 2.64
CGREF1-204ENST00000402550 USP17L10C9JJH3 530 aa31.54■■■□□ 2.64
CGREF1-204ENST00000402550 PPP4R3BQ5MIZ7 849 aa31.54■■■□□ 2.64
CGREF1-204ENST00000402550 PDRG1Q9NUG6 133 aa31.54■■■□□ 2.64
CGREF1-204ENST00000402550 MTMR4Q9NYA4 1195 aa31.54■■■□□ 2.64
CGREF1-204ENST00000402550 A0A1W2PRG0 241 aa31.53■■■□□ 2.64
CGREF1-204ENST00000402550 ST18O60284 1047 aa31.53■■■□□ 2.64
CGREF1-204ENST00000402550 NMT2O60551 498 aa31.53■■■□□ 2.64
CGREF1-204ENST00000402550 EEF2P13639 858 aaKnown RBP31.53■■■□□ 2.64
CGREF1-204ENST00000402550 BACE1P56817 501 aa31.53■■■□□ 2.64
CGREF1-204ENST00000402550 EXOSC10Q01780 885 aaKnown RBP31.53■■■□□ 2.64
CGREF1-204ENST00000402550 ZSCAN10Q96SZ4 725 aaPredicted RBP31.53■■■□□ 2.64
CGREF1-204ENST00000402550 ZKSCAN3Q9BRR0 538 aa31.53■■■□□ 2.64
CGREF1-204ENST00000402550 TCP11L1Q9NUJ3 509 aa31.53■■■□□ 2.64
CGREF1-204ENST00000402550 MANSC4A6NHS7 340 aaPredicted RBP31.52■■■□□ 2.64
CGREF1-204ENST00000402550 IFIT3O14879 490 aaKnown RBP31.52■■■□□ 2.64
CGREF1-204ENST00000402550 ANTXR2P58335 489 aa31.52■■■□□ 2.64
CGREF1-204ENST00000402550 TCEANC2Q96MN5 208 aa31.52■■■□□ 2.64
CGREF1-204ENST00000402550 NYAP2Q9P242 653 aa31.52■■■□□ 2.64
CGREF1-204ENST00000402550 A0A0G2JLL6 359 aaPredicted RBP31.51■■■□□ 2.63
CGREF1-204ENST00000402550 CETPP11597 493 aa31.51■■■□□ 2.63
CGREF1-204ENST00000402550 INHBEP58166 350 aa31.51■■■□□ 2.63
CGREF1-204ENST00000402550 MTMR2Q13614 643 aa31.51■■■□□ 2.63
CGREF1-204ENST00000402550 COL9A3Q14050 684 aaPredicted RBP31.51■■■□□ 2.63
CGREF1-204ENST00000402550 TMEM67Q5HYA8 995 aa31.51■■■□□ 2.63
CGREF1-204ENST00000402550 PRRT2Q7Z6L0 340 aaPredicted RBP31.51■■■□□ 2.63
CGREF1-204ENST00000402550 ARHGEF10LQ9HCE6 1279 aa31.51■■■□□ 2.63
CGREF1-204ENST00000402550 CLIP2Q9UDT6 1046 aa31.51■■■□□ 2.63
CGREF1-204ENST00000402550 MYH4Q9Y623 1939 aa31.51■■■□□ 2.63
CGREF1-204ENST00000402550 TNKSO95271 1327 aa31.5■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms