RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 ZNF654Q8IZM8 581 aa10.38□□□□□ -0.75
HPS4-203ENST00000402105 PAGE5Q96GU1 130 aa10.38□□□□□ -0.75
HPS4-203ENST00000402105 FAM204AQ9H8W3 233 aa10.38□□□□□ -0.75
HPS4-203ENST00000402105 RGPD2P0DJD1 1756 aa10.38□□□□□ -0.75
HPS4-203ENST00000402105 RNF225M0QZC1 329 aaPredicted RBP10.37□□□□□ -0.75
HPS4-203ENST00000402105 IBSPP21815 317 aaPredicted RBP10.37□□□□□ -0.75
HPS4-203ENST00000402105 ACTN2P35609 894 aa10.37□□□□□ -0.75
HPS4-203ENST00000402105 NAP1L1P55209 391 aaKnown RBP10.37□□□□□ -0.75
HPS4-203ENST00000402105 PDE4CQ08493 712 aa10.37□□□□□ -0.75
HPS4-203ENST00000402105 TBX2Q13207 712 aaPredicted RBP10.37□□□□□ -0.75
HPS4-203ENST00000402105 BRD3Q15059 726 aa10.37□□□□□ -0.75
HPS4-203ENST00000402105 CCDC122Q5T0U0 273 aa10.37□□□□□ -0.75
HPS4-203ENST00000402105 CCDC148Q8NFR7 591 aa10.37□□□□□ -0.75
HPS4-203ENST00000402105 TTLL11Q8NHH1 800 aa10.37□□□□□ -0.75
HPS4-203ENST00000402105 EPB41L4AQ9HCS5 686 aaPredicted RBP10.37□□□□□ -0.75
HPS4-203ENST00000402105 TRIM49BA6NDI0 452 aa10.37□□□□□ -0.75
HPS4-203ENST00000402105 PATL2C9JE40 543 aaKnown RBP10.37□□□□□ -0.75
HPS4-203ENST00000402105 DEXIO95424 95 aa10.37□□□□□ -0.75
HPS4-203ENST00000402105 CYP7A1P22680 504 aa10.37□□□□□ -0.75
HPS4-203ENST00000402105 NLRP5P59047 1200 aa10.37□□□□□ -0.75
HPS4-203ENST00000402105 MDM2Q00987 491 aaPredicted RBP10.37□□□□□ -0.75
HPS4-203ENST00000402105 SPATA5Q8NB90 893 aa10.37□□□□□ -0.75
HPS4-203ENST00000402105 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.37□□□□□ -0.75
HPS4-203ENST00000402105 GDAQ9Y2T3 454 aa10.37□□□□□ -0.75
HPS4-203ENST00000402105 WNT7AO00755 349 aa10.37□□□□□ -0.75
HPS4-203ENST00000402105 MFAP3LO75121 409 aa10.37□□□□□ -0.75
HPS4-203ENST00000402105 CPDO75976 1380 aa10.37□□□□□ -0.75
HPS4-203ENST00000402105 PLEKHA8P1O95397 391 aa10.37□□□□□ -0.75
HPS4-203ENST00000402105 PTGDRQ13258 359 aa10.37□□□□□ -0.75
HPS4-203ENST00000402105 KANK3Q6NY19 840 aa10.37□□□□□ -0.75
HPS4-203ENST00000402105 CTR9Q6PD62 1173 aa10.37□□□□□ -0.75
HPS4-203ENST00000402105 MYO6Q9UM54 1294 aa10.37□□□□□ -0.75
HPS4-203ENST00000402105 UBR1Q8IWV7 1749 aa10.37□□□□□ -0.75
HPS4-203ENST00000402105 SLIT1O75093 1534 aa10.36□□□□□ -0.75
HPS4-203ENST00000402105 IPO7O95373 1038 aaKnown RBP10.36□□□□□ -0.75
HPS4-203ENST00000402105 GYPCP04921 128 aa10.36□□□□□ -0.75
HPS4-203ENST00000402105 ZNF18P17022 549 aa10.36□□□□□ -0.75
HPS4-203ENST00000402105 KRT31Q15323 416 aa10.36□□□□□ -0.75
HPS4-203ENST00000402105 ENOX2Q16206 610 aaKnown RBP10.36□□□□□ -0.75
HPS4-203ENST00000402105 BEND6Q5SZJ8 279 aaPredicted RBP10.36□□□□□ -0.75
HPS4-203ENST00000402105 CNGA4Q8IV77 575 aa10.36□□□□□ -0.75
HPS4-203ENST00000402105 CRACR2BQ8N4Y2 399 aaPredicted RBP10.36□□□□□ -0.75
HPS4-203ENST00000402105 GOLGA5Q8TBA6 731 aa10.36□□□□□ -0.75
HPS4-203ENST00000402105 SMARCC1Q92922 1105 aaPredicted RBP10.36□□□□□ -0.75
HPS4-203ENST00000402105 KRT23Q9C075 422 aa10.36□□□□□ -0.75
HPS4-203ENST00000402105 GNL3LQ9NVN8 582 aaKnown RBP10.36□□□□□ -0.75
HPS4-203ENST00000402105 MEGF6O75095 1541 aa10.36□□□□□ -0.75
HPS4-203ENST00000402105 BAZ2BQ9UIF8 2168 aaKnown RBP10.36□□□□□ -0.75
HPS4-203ENST00000402105 CCDC196A0A1B0GTZ2 297 aa10.36□□□□□ -0.75
HPS4-203ENST00000402105 ACTN4O43707 911 aaKnown RBP10.36□□□□□ -0.75
HPS4-203ENST00000402105 PDE8BO95263 885 aa10.36□□□□□ -0.75
HPS4-203ENST00000402105 IFNAR1P17181 557 aa10.36□□□□□ -0.75
HPS4-203ENST00000402105 CYP27A1Q02318 531 aa10.36□□□□□ -0.75
HPS4-203ENST00000402105 CUL4BQ13620 913 aa10.36□□□□□ -0.75
HPS4-203ENST00000402105 CRACR2AQ9BSW2 395 aa10.36□□□□□ -0.75
HPS4-203ENST00000402105 BRMS1Q9HCU9 246 aa10.36□□□□□ -0.75
HPS4-203ENST00000402105 SRPRBQ9Y5M8 271 aaKnown RBP10.36□□□□□ -0.75
HPS4-203ENST00000402105 TACC3Q9Y6A5 838 aa10.36□□□□□ -0.75
HPS4-203ENST00000402105 TOPAZ1Q8N9V7 1692 aa10.36□□□□□ -0.75
HPS4-203ENST00000402105 TNKSO95271 1327 aa10.36□□□□□ -0.75
HPS4-203ENST00000402105 FAM170AA1A519 330 aa10.36□□□□□ -0.75
HPS4-203ENST00000402105 LRRIQ3A6PVS8 624 aaPredicted RBP10.36□□□□□ -0.75
HPS4-203ENST00000402105 ZPR1O75312 459 aa10.36□□□□□ -0.75
HPS4-203ENST00000402105 KRT2P35908 639 aa10.36□□□□□ -0.75
HPS4-203ENST00000402105 ERVK-24P63145 666 aa10.36□□□□□ -0.75
HPS4-203ENST00000402105 RASGRF1Q13972 1273 aa10.36□□□□□ -0.75
HPS4-203ENST00000402105 IFIT1BQ5T764 474 aaKnown RBP10.36□□□□□ -0.75
HPS4-203ENST00000402105 RASGRP4Q8TDF6 673 aa10.36□□□□□ -0.75
HPS4-203ENST00000402105 NELFBQ8WX92 580 aa10.36□□□□□ -0.75
HPS4-203ENST00000402105 EXOC4Q96A65 974 aa10.36□□□□□ -0.75
HPS4-203ENST00000402105 A0A1B0GTH6 734 aa10.35□□□□□ -0.75
HPS4-203ENST00000402105 ZNF185O15231 689 aa10.35□□□□□ -0.75
HPS4-203ENST00000402105 DPYDQ12882 1025 aa10.35□□□□□ -0.75
HPS4-203ENST00000402105 FAM47AQ5JRC9 791 aa10.35□□□□□ -0.75
HPS4-203ENST00000402105 DHX37Q8IY37 1157 aaKnown RBP10.35□□□□□ -0.75
HPS4-203ENST00000402105 ZBTB38Q8NAP3 1195 aaPredicted RBP10.35□□□□□ -0.75
HPS4-203ENST00000402105 ACBD3Q9H3P7 528 aa10.35□□□□□ -0.75
HPS4-203ENST00000402105 KCNJ18B7U540 433 aa10.35□□□□□ -0.75
HPS4-203ENST00000402105 ATP8B1O43520 1251 aa10.35□□□□□ -0.75
HPS4-203ENST00000402105 NMT2O60551 498 aa10.35□□□□□ -0.75
HPS4-203ENST00000402105 TRIM21P19474 475 aaKnown RBP10.35□□□□□ -0.75
HPS4-203ENST00000402105 KCNJ12Q14500 433 aa10.35□□□□□ -0.75
HPS4-203ENST00000402105 TRIM47Q96LD4 638 aa10.35□□□□□ -0.75
HPS4-203ENST00000402105 CTAGE1Q96RT6 745 aa10.35□□□□□ -0.75
HPS4-203ENST00000402105 ADD3Q9UEY8 706 aaKnown RBP10.35□□□□□ -0.75
HPS4-203ENST00000402105 RIPOR2Q9Y4F9 1068 aa10.35□□□□□ -0.75
HPS4-203ENST00000402105 PIP4K2BP78356 416 aa10.35□□□□□ -0.75
HPS4-203ENST00000402105 KCTD19Q17RG1 926 aaPredicted RBP10.35□□□□□ -0.75
HPS4-203ENST00000402105 PANX2Q96RD6 677 aa10.35□□□□□ -0.75
HPS4-203ENST00000402105 MAGEC2Q9UBF1 373 aaPredicted RBP10.35□□□□□ -0.75
HPS4-203ENST00000402105 GSG1L2A8MUP6 293 aa10.34□□□□□ -0.75
HPS4-203ENST00000402105 RNF40O75150 1001 aa10.34□□□□□ -0.75
HPS4-203ENST00000402105 STARD3NLO95772 234 aa10.34□□□□□ -0.75
HPS4-203ENST00000402105 SLC5A1P13866 664 aa10.34□□□□□ -0.75
HPS4-203ENST00000402105 CXCR5P32302 372 aa10.34□□□□□ -0.75
HPS4-203ENST00000402105 CTSWP56202 376 aa10.34□□□□□ -0.75
HPS4-203ENST00000402105 RNASE9P60153 205 aaKnown RBP10.34□□□□□ -0.75
HPS4-203ENST00000402105 UBE3CQ15386 1083 aa10.34□□□□□ -0.75
HPS4-203ENST00000402105 TTC38Q5R3I4 469 aa10.34□□□□□ -0.75
HPS4-203ENST00000402105 CYP26C1Q6V0L0 522 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms