RNA–Protein interactions for RNA: ENST00000401979.6

FAM49B-201, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM49B, Length 2,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-201ENST00000401979 DDAH1O94760 285 aa18.25■□□□□ 0.51
FAM49B-201ENST00000401979 RCAN1P53805 252 aa18.25■□□□□ 0.51
FAM49B-201ENST00000401979 HIRAP54198 1017 aaPredicted RBP18.25■□□□□ 0.51
FAM49B-201ENST00000401979 RTN1Q16799 776 aa18.25■□□□□ 0.51
FAM49B-201ENST00000401979 FAM184AQ8NB25 1140 aa18.25■□□□□ 0.51
FAM49B-201ENST00000401979 PNMA1Q8ND90 353 aa18.25■□□□□ 0.51
FAM49B-201ENST00000401979 DDX11Q96FC9 970 aa18.25■□□□□ 0.51
FAM49B-201ENST00000401979 PTPDC1A2A3K4 754 aa18.24■□□□□ 0.51
FAM49B-201ENST00000401979 JAK2O60674 1132 aa18.24■□□□□ 0.51
FAM49B-201ENST00000401979 CDKL5O76039 1030 aa18.24■□□□□ 0.51
FAM49B-201ENST00000401979 GDF11O95390 407 aa18.24■□□□□ 0.51
FAM49B-201ENST00000401979 ADD1P35611 737 aaKnown RBP18.24■□□□□ 0.51
FAM49B-201ENST00000401979 ABCB5Q2M3G0 1257 aa18.24■□□□□ 0.51
FAM49B-201ENST00000401979 PPP4R3BQ5MIZ7 849 aa18.24■□□□□ 0.51
FAM49B-201ENST00000401979 FANCBQ8NB91 859 aa18.24■□□□□ 0.51
FAM49B-201ENST00000401979 NSUN7Q8NE18 718 aaKnown RBP18.24■□□□□ 0.51
FAM49B-201ENST00000401979 CABP5Q9NP86 173 aa18.24■□□□□ 0.51
FAM49B-201ENST00000401979 MTMR4Q9NYA4 1195 aa18.24■□□□□ 0.51
FAM49B-201ENST00000401979 PPFIA3O75145 1194 aa18.23■□□□□ 0.51
FAM49B-201ENST00000401979 NUCB2P80303 420 aa18.23■□□□□ 0.51
FAM49B-201ENST00000401979 HMGN5P82970 282 aaKnown RBP18.23■□□□□ 0.51
FAM49B-201ENST00000401979 ATP2B2Q01814 1243 aa18.23■□□□□ 0.51
FAM49B-201ENST00000401979 CTCFLQ8NI51 663 aaPredicted RBP18.23■□□□□ 0.51
FAM49B-201ENST00000401979 ANKS1AQ92625 1134 aa18.23■□□□□ 0.51
FAM49B-201ENST00000401979 TMEM47Q9BQJ4 181 aa18.23■□□□□ 0.51
FAM49B-201ENST00000401979 MTMR7Q9Y216 660 aa18.23■□□□□ 0.51
FAM49B-201ENST00000401979 KIF3AQ9Y496 699 aa18.23■□□□□ 0.51
FAM49B-201ENST00000401979 TTLL1O95922 423 aa18.23■□□□□ 0.51
FAM49B-201ENST00000401979 CDC27P30260 824 aa18.23■□□□□ 0.51
FAM49B-201ENST00000401979 TMEM179Q6ZVK1 233 aa18.23■□□□□ 0.51
FAM49B-201ENST00000401979 DCPSQ96C86 337 aaKnown RBP18.23■□□□□ 0.51
FAM49B-201ENST00000401979 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.23■□□□□ 0.51
FAM49B-201ENST00000401979 IQCA1LA6NCM1 817 aa18.22■□□□□ 0.51
FAM49B-201ENST00000401979 TBC1D12O60347 775 aa18.22■□□□□ 0.51
FAM49B-201ENST00000401979 CTDNEP1O95476 244 aa18.22■□□□□ 0.51
FAM49B-201ENST00000401979 TOP1P11387 765 aaKnown RBP18.22■□□□□ 0.51
FAM49B-201ENST00000401979 EPHX2P34913 555 aa18.22■□□□□ 0.51
FAM49B-201ENST00000401979 TROAPQ12815 778 aa18.22■□□□□ 0.51
FAM49B-201ENST00000401979 RAB3GAP1Q15042 981 aa18.22■□□□□ 0.51
FAM49B-201ENST00000401979 PPP2R5BQ15173 497 aa18.22■□□□□ 0.51
FAM49B-201ENST00000401979 HOOK2Q96ED9 719 aa18.22■□□□□ 0.51
FAM49B-201ENST00000401979 TEPSINQ96N21 525 aa18.22■□□□□ 0.51
FAM49B-201ENST00000401979 CLIP2Q9UDT6 1046 aa18.22■□□□□ 0.51
FAM49B-201ENST00000401979 GH2P01242 217 aa18.22■□□□□ 0.51
FAM49B-201ENST00000401979 PDCP20941 246 aa18.22■□□□□ 0.51
FAM49B-201ENST00000401979 CLEC10AQ8IUN9 316 aa18.22■□□□□ 0.51
FAM49B-201ENST00000401979 KANSL2Q9H9L4 492 aa18.22■□□□□ 0.51
FAM49B-201ENST00000401979 PITPNM2Q9BZ72 1349 aa18.21■□□□□ 0.51
FAM49B-201ENST00000401979 NID2Q14112 1375 aa18.21■□□□□ 0.51
FAM49B-201ENST00000401979 KIF5BP33176 963 aa18.21■□□□□ 0.51
FAM49B-201ENST00000401979 LARP1BQ659C4 914 aaKnown RBP18.21■□□□□ 0.51
FAM49B-201ENST00000401979 USP50Q70EL3 339 aaPredicted RBP18.21■□□□□ 0.51
FAM49B-201ENST00000401979 SMARCC2Q8TAQ2 1214 aa18.21■□□□□ 0.51
FAM49B-201ENST00000401979 RBM28Q9NW13 759 aaKnown RBP18.21■□□□□ 0.51
FAM49B-201ENST00000401979 PGAP2Q9UHJ9 254 aa18.21■□□□□ 0.51
FAM49B-201ENST00000401979 IGKV6D-41A0A0C4DH26 115 aa18.2■□□□□ 0.5
FAM49B-201ENST00000401979 SEPT2Q15019 361 aa18.2■□□□□ 0.5
FAM49B-201ENST00000401979 NBPF12Q5TAG4 269 aaPredicted RBP18.2■□□□□ 0.5
FAM49B-201ENST00000401979 SULF1Q8IWU6 871 aa18.2■□□□□ 0.5
FAM49B-201ENST00000401979 PPP2R3BQ9Y5P8 575 aa18.2■□□□□ 0.5
FAM49B-201ENST00000401979 SYT1P21579 422 aa18.2■□□□□ 0.5
FAM49B-201ENST00000401979 ICA1Q05084 483 aa18.2■□□□□ 0.5
FAM49B-201ENST00000401979 PKP1Q13835 747 aa18.2■□□□□ 0.5
FAM49B-201ENST00000401979 SHROOM1Q2M3G4 852 aaPredicted RBP18.2■□□□□ 0.5
FAM49B-201ENST00000401979 EAPPQ56P03 285 aaPredicted RBP18.2■□□□□ 0.5
FAM49B-201ENST00000401979 DCAF15Q66K64 600 aa18.2■□□□□ 0.5
FAM49B-201ENST00000401979 CCDC82Q8N4S0 544 aa18.2■□□□□ 0.5
FAM49B-201ENST00000401979 FAM217BQ9NTX9 383 aaPredicted RBP18.2■□□□□ 0.5
FAM49B-201ENST00000401979 ORC3Q9UBD5 711 aaPredicted RBP18.2■□□□□ 0.5
FAM49B-201ENST00000401979 POLR2AP24928 1970 aaKnown RBP18.19■□□□□ 0.5
FAM49B-201ENST00000401979 STX6O43752 255 aa18.19■□□□□ 0.5
FAM49B-201ENST00000401979 FOXD4L5Q5VV16 416 aaPredicted RBP18.19■□□□□ 0.5
FAM49B-201ENST00000401979 PRAMEF18Q5VWM3 479 aa18.19■□□□□ 0.5
FAM49B-201ENST00000401979 TRIM22Q8IYM9 498 aa18.19■□□□□ 0.5
FAM49B-201ENST00000401979 LRRC47Q8N1G4 583 aaKnown RBP18.19■□□□□ 0.5
FAM49B-201ENST00000401979 FOXD4L4Q8WXT5 416 aaPredicted RBP18.19■□□□□ 0.5
FAM49B-201ENST00000401979 PHKBQ93100 1093 aa18.19■□□□□ 0.5
FAM49B-201ENST00000401979 SCN4AP35499 1836 aa18.18■□□□□ 0.5
FAM49B-201ENST00000401979 VPS37CA5D8V6 355 aaPredicted RBP18.18■□□□□ 0.5
FAM49B-201ENST00000401979 RAD21O60216 631 aa18.18■□□□□ 0.5
FAM49B-201ENST00000401979 SSRP1Q08945 709 aaKnown RBP18.18■□□□□ 0.5
FAM49B-201ENST00000401979 CMTR1Q8N1G2 835 aaKnown RBP18.18■□□□□ 0.5
FAM49B-201ENST00000401979 SLC26A6Q9BXS9 759 aa18.18■□□□□ 0.5
FAM49B-201ENST00000401979 WDR33Q9C0J8 1336 aaKnown RBP18.18■□□□□ 0.5
FAM49B-201ENST00000401979 GREB1LQ9C091 1923 aaPredicted RBP18.18■□□□□ 0.5
FAM49B-201ENST00000401979 MYH4Q9Y623 1939 aa18.18■□□□□ 0.5
FAM49B-201ENST00000401979 EEF2P13639 858 aaKnown RBP18.18■□□□□ 0.5
FAM49B-201ENST00000401979 PDIA4P13667 645 aaKnown RBP18.18■□□□□ 0.5
FAM49B-201ENST00000401979 IFNAR1P17181 557 aa18.18■□□□□ 0.5
FAM49B-201ENST00000401979 NOVP48745 357 aa18.18■□□□□ 0.5
FAM49B-201ENST00000401979 AKAP17AQ02040 695 aaKnown RBP18.18■□□□□ 0.5
FAM49B-201ENST00000401979 RRP1BQ14684 758 aaKnown RBP18.18■□□□□ 0.5
FAM49B-201ENST00000401979 SUPT20HL1Q3ZLR7 823 aa18.18■□□□□ 0.5
FAM49B-201ENST00000401979 H3BQV1 296 aa18.17■□□□□ 0.5
FAM49B-201ENST00000401979 CAP2P40123 477 aa18.17■□□□□ 0.5
FAM49B-201ENST00000401979 MAP3K10Q02779 954 aa18.17■□□□□ 0.5
FAM49B-201ENST00000401979 NTRK3Q16288 839 aa18.17■□□□□ 0.5
FAM49B-201ENST00000401979 IFFO2Q5TF58 517 aa18.17■□□□□ 0.5
FAM49B-201ENST00000401979 PNMA8AQ86V59 439 aaPredicted RBP18.17■□□□□ 0.5
FAM49B-201ENST00000401979 MAP3K14Q99558 947 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms