RNA–Protein interactions for RNA: ENST00000399793.6

RETREG1-202, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best) BASIC

Gene RETREG1, Length 3,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-202ENST00000399793 BMP6P22004 513 aa9.77□□□□□ -0.85
RETREG1-202ENST00000399793 CMA1P23946 247 aa9.77□□□□□ -0.85
RETREG1-202ENST00000399793 LACTB2Q53H82 288 aaPredicted RBP9.77□□□□□ -0.85
RETREG1-202ENST00000399793 UBE3BQ7Z3V4 1068 aa9.77□□□□□ -0.85
RETREG1-202ENST00000399793 ZIM3Q96PE6 472 aa9.77□□□□□ -0.85
RETREG1-202ENST00000399793 TMEM165Q9HC07 324 aa9.77□□□□□ -0.85
RETREG1-202ENST00000399793 KDM6AO15550 1401 aaPredicted RBP9.77□□□□□ -0.85
RETREG1-202ENST00000399793 MROH7-TTC4A0A0A0MT08 1334 aa9.76□□□□□ -0.85
RETREG1-202ENST00000399793 USP42Q9H9J4 1324 aaKnown RBP9.76□□□□□ -0.85
RETREG1-202ENST00000399793 DIAPH2O60879 1101 aa9.76□□□□□ -0.85
RETREG1-202ENST00000399793 POLR3DP05423 398 aaPredicted RBP9.76□□□□□ -0.85
RETREG1-202ENST00000399793 SYKP43405 635 aa9.76□□□□□ -0.85
RETREG1-202ENST00000399793 CTCFP49711 727 aaPredicted RBP9.76□□□□□ -0.85
RETREG1-202ENST00000399793 PPP1R7Q15435 360 aa9.76□□□□□ -0.85
RETREG1-202ENST00000399793 GALNT15Q8N3T1 639 aa9.76□□□□□ -0.85
RETREG1-202ENST00000399793 RBM41Q96IZ5 413 aaKnown RBP9.76□□□□□ -0.85
RETREG1-202ENST00000399793 GORASP1Q9BQQ3 440 aa9.76□□□□□ -0.85
RETREG1-202ENST00000399793 USP44Q9H0E7 712 aa9.76□□□□□ -0.85
RETREG1-202ENST00000399793 TRIM10Q9UDY6 481 aa9.76□□□□□ -0.85
RETREG1-202ENST00000399793 DNAJC5BQ9UF47 199 aa9.76□□□□□ -0.85
RETREG1-202ENST00000399793 GUCA1BQ9UMX6 200 aa9.76□□□□□ -0.85
RETREG1-202ENST00000399793 MROH2AA6NES4 1674 aa9.76□□□□□ -0.85
RETREG1-202ENST00000399793 MAP2P11137 1827 aaKnown RBP9.76□□□□□ -0.85
RETREG1-202ENST00000399793 MFAP3LO75121 409 aa9.76□□□□□ -0.85
RETREG1-202ENST00000399793 YEATS4O95619 227 aa9.76□□□□□ -0.85
RETREG1-202ENST00000399793 UBTFL1P0CB47 393 aaPredicted RBP9.76□□□□□ -0.85
RETREG1-202ENST00000399793 FMR1Q06787 632 aaKnown RBP eCLIP9.76□□□□□ -0.85
RETREG1-202ENST00000399793 CKAP4Q07065 602 aaKnown RBP9.76□□□□□ -0.85
RETREG1-202ENST00000399793 C2orf54Q08AI8 447 aa9.76□□□□□ -0.85
RETREG1-202ENST00000399793 EMC10Q5UCC4 262 aa9.76□□□□□ -0.85
RETREG1-202ENST00000399793 MCM10Q7L590 875 aa9.76□□□□□ -0.85
RETREG1-202ENST00000399793 FOXP4Q8IVH2 680 aaPredicted RBP9.76□□□□□ -0.85
RETREG1-202ENST00000399793 TRMT44Q8IYL2 757 aaKnown RBP9.76□□□□□ -0.85
RETREG1-202ENST00000399793 HVCN1Q96D96 273 aa9.76□□□□□ -0.85
RETREG1-202ENST00000399793 FAM167BQ9BTA0 163 aa9.76□□□□□ -0.85
RETREG1-202ENST00000399793 SLC5A4Q9NY91 659 aa9.76□□□□□ -0.85
RETREG1-202ENST00000399793 ZFATQ9P243 1243 aa9.76□□□□□ -0.85
RETREG1-202ENST00000399793 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.76□□□□□ -0.85
RETREG1-202ENST00000399793 U3KPZ7 1027 aaPredicted RBP9.76□□□□□ -0.85
RETREG1-202ENST00000399793 EIF4E1BA6NMX2 242 aaKnown RBP9.76□□□□□ -0.85
RETREG1-202ENST00000399793 PDE2AO00408 941 aaPredicted RBP9.76□□□□□ -0.85
RETREG1-202ENST00000399793 FMNL1O95466 1100 aaPredicted RBP9.76□□□□□ -0.85
RETREG1-202ENST00000399793 CASP14P31944 242 aa9.76□□□□□ -0.85
RETREG1-202ENST00000399793 ABL2P42684 1182 aa9.76□□□□□ -0.85
RETREG1-202ENST00000399793 EZH2Q15910 746 aaKnown RBP9.76□□□□□ -0.85
RETREG1-202ENST00000399793 TAX1BP1Q86VP1 789 aa9.76□□□□□ -0.85
RETREG1-202ENST00000399793 CAGE1Q8TC20 777 aa9.76□□□□□ -0.85
RETREG1-202ENST00000399793 HDAC7Q8WUI4 952 aa9.76□□□□□ -0.85
RETREG1-202ENST00000399793 EVI5LQ96CN4 794 aa9.76□□□□□ -0.85
RETREG1-202ENST00000399793 L3MBTL3Q96JM7 780 aaPredicted RBP9.76□□□□□ -0.85
RETREG1-202ENST00000399793 NEK1Q96PY6 1258 aa9.76□□□□□ -0.85
RETREG1-202ENST00000399793 SAMSN1Q9NSI8 373 aaKnown RBP9.76□□□□□ -0.85
RETREG1-202ENST00000399793 NOP53Q9NZM5 478 aaKnown RBP9.76□□□□□ -0.85
RETREG1-202ENST00000399793 HMG20BQ9P0W2 317 aa9.76□□□□□ -0.85
RETREG1-202ENST00000399793 LEMD3Q9Y2U8 911 aa9.76□□□□□ -0.85
RETREG1-202ENST00000399793 A0A0D9SFI3 127 aa9.75□□□□□ -0.85
RETREG1-202ENST00000399793 QPCTQ16769 361 aa9.75□□□□□ -0.85
RETREG1-202ENST00000399793 AMOTQ4VCS5 1084 aa9.75□□□□□ -0.85
RETREG1-202ENST00000399793 LRRC23Q53EV4 343 aaPredicted RBP9.75□□□□□ -0.85
RETREG1-202ENST00000399793 RRP12Q5JTH9 1297 aaKnown RBP9.75□□□□□ -0.85
RETREG1-202ENST00000399793 FKBP15Q5T1M5 1219 aa9.75□□□□□ -0.85
RETREG1-202ENST00000399793 SLF1Q9BQI6 1058 aa9.75□□□□□ -0.85
RETREG1-202ENST00000399793 POLR3EQ9NVU0 708 aa9.75□□□□□ -0.85
RETREG1-202ENST00000399793 DMGDHQ9UI17 866 aaKnown RBP9.75□□□□□ -0.85
RETREG1-202ENST00000399793 PCDHA5Q9Y5H7 936 aa9.75□□□□□ -0.85
RETREG1-202ENST00000399793 EMILIN1Q9Y6C2 1016 aa9.75□□□□□ -0.85
RETREG1-202ENST00000399793 CEMIPQ8WUJ3 1361 aa9.75□□□□□ -0.85
RETREG1-202ENST00000399793 TET3O43151 1660 aa9.75□□□□□ -0.85
RETREG1-202ENST00000399793 CAMSAP1Q5T5Y3 1602 aa9.75□□□□□ -0.85
RETREG1-202ENST00000399793 A0A1B0GTH6 734 aa9.75□□□□□ -0.85
RETREG1-202ENST00000399793 PSMD14O00487 310 aa9.75□□□□□ -0.85
RETREG1-202ENST00000399793 MAFGO15525 162 aa9.75□□□□□ -0.85
RETREG1-202ENST00000399793 MYL1P05976 194 aa9.75□□□□□ -0.85
RETREG1-202ENST00000399793 CLTAP09496 248 aa9.75□□□□□ -0.85
RETREG1-202ENST00000399793 SCNN1BP51168 640 aa9.75□□□□□ -0.85
RETREG1-202ENST00000399793 ERVK-24P63145 666 aa9.75□□□□□ -0.85
RETREG1-202ENST00000399793 PPP1R15BQ5SWA1 713 aa9.75□□□□□ -0.85
RETREG1-202ENST00000399793 AGAP11Q8TF27 550 aa9.75□□□□□ -0.85
RETREG1-202ENST00000399793 ZFAND2BQ8WV99 257 aa9.75□□□□□ -0.85
RETREG1-202ENST00000399793 SEC16BQ96JE7 1060 aa9.75□□□□□ -0.85
RETREG1-202ENST00000399793 PIDD1Q9HB75 910 aa9.75□□□□□ -0.85
RETREG1-202ENST00000399793 ECHDC1Q9NTX5 307 aa9.75□□□□□ -0.85
RETREG1-202ENST00000399793 SRRM3A6NNA2 597 aaPredicted RBP9.74□□□□□ -0.85
RETREG1-202ENST00000399793 ZNF185O15231 689 aa9.74□□□□□ -0.85
RETREG1-202ENST00000399793 MARCKSP29966 332 aaPredicted RBP9.74□□□□□ -0.85
RETREG1-202ENST00000399793 PPARDQ03181 441 aa9.74□□□□□ -0.85
RETREG1-202ENST00000399793 PAPD7Q5XG87 772 aaKnown RBP9.74□□□□□ -0.85
RETREG1-202ENST00000399793 OTUD7BQ6GQQ9 843 aa9.74□□□□□ -0.85
RETREG1-202ENST00000399793 CCDC70Q6NSX1 233 aa9.74□□□□□ -0.85
RETREG1-202ENST00000399793 METTL16Q86W50 562 aaKnown RBP9.74□□□□□ -0.85
RETREG1-202ENST00000399793 ATL2Q8NHH9 583 aa9.74□□□□□ -0.85
RETREG1-202ENST00000399793 CCHCR1Q8TD31 782 aa9.74□□□□□ -0.85
RETREG1-202ENST00000399793 AIDAQ96BJ3 306 aa9.74□□□□□ -0.85
RETREG1-202ENST00000399793 CCDC97Q96F63 343 aaPredicted RBP9.74□□□□□ -0.85
RETREG1-202ENST00000399793 DPPA5A6NC42 116 aa9.74□□□□□ -0.85
RETREG1-202ENST00000399793 GMNCA6NCL1 334 aa9.74□□□□□ -0.85
RETREG1-202ENST00000399793 ZNF233A6NK53 670 aa9.74□□□□□ -0.85
RETREG1-202ENST00000399793 OATP04181 439 aa9.74□□□□□ -0.85
RETREG1-202ENST00000399793 FXR1P51114 621 aaKnown RBP eCLIP9.74□□□□□ -0.85
RETREG1-202ENST00000399793 EPHB4P54760 987 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms