RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 COMMD10Q9Y6G5 202 aa3.65□□□□□ -1.83
KNL1-202ENST00000399668 ABCC3O15438 1527 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 DNAJC13O75165 2243 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 KDRP35968 1356 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 TMEM2Q9UHN6 1383 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 ERVV-2B6SEH9 535 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 POTEB2H3BUK9 544 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 HOXB7P09629 217 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 CAPN2P17655 700 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 NF2P35240 595 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 TECP42680 631 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 FANCCQ00597 558 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 TFAP4Q01664 338 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 LONRF3Q496Y0 759 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 RILPL1Q5EBL4 403 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 FAM182BQ5T319 152 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 DPP8Q6V1X1 898 aaPredicted RBP3.64□□□□□ -1.83
KNL1-202ENST00000399668 RDH13Q8NBN7 331 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 ATRIPQ8WXE1 791 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 CCDC114Q96M63 670 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 BLZF1Q9H2G9 400 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 ARHGEF10LQ9HCE6 1279 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 ABCA9Q8IUA7 1624 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 LRRC7Q96NW7 1537 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 AOX1Q06278 1338 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 UTRNP46939 3433 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 LOXHD1Q8IVV2 1947 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 NCBP1Q09161 790 aaKnown RBP3.64□□□□□ -1.83
KNL1-202ENST00000399668 TCIRG1Q13488 830 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 TTC38Q5R3I4 469 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 CNGA4Q8IV77 575 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 ZNF654Q8IZM8 581 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 PPP1R14CQ8TAE6 165 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 UBLCP1Q8WVY7 318 aaPredicted RBP3.64□□□□□ -1.83
KNL1-202ENST00000399668 BBXQ8WY36 941 aaPredicted RBP3.64□□□□□ -1.83
KNL1-202ENST00000399668 PCDHA12Q9UN75 941 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 TTF2Q9UNY4 1162 aaKnown RBP3.64□□□□□ -1.83
KNL1-202ENST00000399668 FER1L5A0AVI2 2057 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 A0A087WWV3 80 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 U2AF2P26368 475 aaKnown RBP eCLIP3.64□□□□□ -1.831e-7■■■■■ 29.1
KNL1-202ENST00000399668 ARID4AP29374 1257 aaPredicted RBP3.64□□□□□ -1.83
KNL1-202ENST00000399668 MAP3K9P80192 1104 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 SPAG1Q07617 926 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 SF3A3Q12874 501 aaKnown RBP eCLIP3.64□□□□□ -1.83
KNL1-202ENST00000399668 DOK7Q18PE1 504 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 GRIPAP1Q4V328 841 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 IPO4Q8TEX9 1081 aaKnown RBP3.64□□□□□ -1.83
KNL1-202ENST00000399668 EYA3Q99504 573 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 ZNF408Q9H9D4 720 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 TLR7Q9NYK1 1049 aaKnown RBP3.64□□□□□ -1.83
KNL1-202ENST00000399668 INSRP06213 1382 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 HEATR1Q9H583 2144 aaKnown RBP3.64□□□□□ -1.83
KNL1-202ENST00000399668 CUTAO60888 179 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 SCNN1DP51172 638 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 EVCP57679 992 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 IRX5P78411 483 aaPredicted RBP3.64□□□□□ -1.83
KNL1-202ENST00000399668 TRAF1Q13077 416 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 PRKG1Q13976 671 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 PARP10Q53GL7 1025 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 USP37Q86T82 979 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 DIS3L2Q8IYB7 885 aaKnown RBP3.64□□□□□ -1.83
KNL1-202ENST00000399668 SSH3Q8TE77 659 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 MAK16Q9BXY0 300 aaKnown RBP3.64□□□□□ -1.83
KNL1-202ENST00000399668 PLEKHA4Q9H4M7 779 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 ZSWIM6Q9HCJ5 1215 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 KIAA1468Q9P260 1216 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 AGTPBP1Q9UPW5 1226 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 SETBP1Q9Y6X0 1596 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 USP6P35125 1406 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 CASZ1Q86V15 1759 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 TLDC2A0PJX2 215 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 COBLO75128 1261 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 CFBP00751 764 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 PAK1Q13153 545 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 PTGDRQ13258 359 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 MICALCLQ6ZW33 695 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 ZNF589Q86UQ0 364 aaPredicted RBP3.64□□□□□ -1.83
KNL1-202ENST00000399668 LRRC47Q8N1G4 583 aaKnown RBP3.64□□□□□ -1.83
KNL1-202ENST00000399668 FERMT1Q9BQL6 677 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 NFE2L3Q9Y4A8 694 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 DIDO1Q9BTC0 2240 aaKnown RBP3.64□□□□□ -1.83
KNL1-202ENST00000399668 MYLKQ15746 1914 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 CABIN1Q9Y6J0 2220 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 CENPFP49454 3210 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 ARL1P40616 181 aaPredicted RBP3.64□□□□□ -1.83
KNL1-202ENST00000399668 PHKA1P46020 1223 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 RPS8P62241 208 aaKnown RBP3.64□□□□□ -1.83
KNL1-202ENST00000399668 PPP1R7Q15435 360 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 HS1BP3Q53T59 392 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 HERC4Q5GLZ8 1057 aaPredicted RBP3.64□□□□□ -1.83
KNL1-202ENST00000399668 TTC6Q86TZ1 520 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 GPATCH11Q8N954 259 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 NELFBQ8WX92 580 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 CLIC6Q96NY7 704 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 FNBP1Q96RU3 617 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 CLIC4Q9Y696 253 aa3.64□□□□□ -1.83
KNL1-202ENST00000399668 CDK12Q9NYV4 1490 aaPredicted RBP3.63□□□□□ -1.83
KNL1-202ENST00000399668 KIF4AO95239 1232 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 NLRP12P59046 1061 aa3.63□□□□□ -1.83
KNL1-202ENST00000399668 ZBTB16Q05516 673 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms