RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 ITKQ08881 620 aa13.6□□□□□ -0.23
CACNA1C-219ENST00000399649 PLCH2O75038 1416 aa13.6□□□□□ -0.23
CACNA1C-219ENST00000399649 STAM2O75886 525 aa13.6□□□□□ -0.23
CACNA1C-219ENST00000399649 USH1GQ495M9 461 aa13.6□□□□□ -0.23
CACNA1C-219ENST00000399649 LONRF3Q496Y0 759 aa13.6□□□□□ -0.23
CACNA1C-219ENST00000399649 CCDC13Q8IYE1 715 aa13.6□□□□□ -0.23
CACNA1C-219ENST00000399649 ANKRD42Q8N9B4 389 aa13.6□□□□□ -0.23
CACNA1C-219ENST00000399649 CARD6Q9BX69 1037 aa13.6□□□□□ -0.23
CACNA1C-219ENST00000399649 Q9H521 79 aa13.6□□□□□ -0.23
CACNA1C-219ENST00000399649 HIBADHP31937 336 aaKnown RBP13.6□□□□□ -0.23
CACNA1C-219ENST00000399649 STX2P32856 288 aa13.6□□□□□ -0.23
CACNA1C-219ENST00000399649 LMTK3Q96Q04 1460 aa13.6□□□□□ -0.23
CACNA1C-219ENST00000399649 DBN1Q16643 649 aa13.59□□□□□ -0.23
CACNA1C-219ENST00000399649 OTUD6AQ7L8S5 288 aa13.59□□□□□ -0.23
CACNA1C-219ENST00000399649 DYMQ7RTS9 669 aa13.59□□□□□ -0.23
CACNA1C-219ENST00000399649 FAN1Q9Y2M0 1017 aa13.59□□□□□ -0.23
CACNA1C-219ENST00000399649 ASXL1Q8IXJ9 1541 aa13.59□□□□□ -0.23
CACNA1C-219ENST00000399649 GNA14O95837 355 aa13.59□□□□□ -0.23
CACNA1C-219ENST00000399649 CEP85Q6P2H3 762 aa13.59□□□□□ -0.23
CACNA1C-219ENST00000399649 NUCKS1Q9H1E3 243 aaKnown RBP13.59□□□□□ -0.23
CACNA1C-219ENST00000399649 MAGEA1P43355 309 aa13.59□□□□□ -0.23
CACNA1C-219ENST00000399649 PUM3Q15397 648 aaKnown RBP13.59□□□□□ -0.23
CACNA1C-219ENST00000399649 HERC4Q5GLZ8 1057 aaPredicted RBP13.59□□□□□ -0.23
CACNA1C-219ENST00000399649 LRRC43Q8N309 656 aa13.59□□□□□ -0.23
CACNA1C-219ENST00000399649 MLKLQ8NB16 471 aa13.59□□□□□ -0.23
CACNA1C-219ENST00000399649 SDCCAG3Q96C92 435 aa13.59□□□□□ -0.23
CACNA1C-219ENST00000399649 LLPHQ9BRT6 129 aaKnown RBP13.59□□□□□ -0.23
CACNA1C-219ENST00000399649 MAP3K5Q99683 1374 aa13.59□□□□□ -0.23
CACNA1C-219ENST00000399649 CDR2Q01850 454 aa13.59□□□□□ -0.23
CACNA1C-219ENST00000399649 CWF19L2Q2TBE0 894 aaKnown RBP13.59□□□□□ -0.23
CACNA1C-219ENST00000399649 CABP7Q86V35 215 aa13.59□□□□□ -0.23
CACNA1C-219ENST00000399649 TEKT1Q969V4 418 aa13.59□□□□□ -0.23
CACNA1C-219ENST00000399649 BAG5Q9UL15 447 aa13.59□□□□□ -0.23
CACNA1C-219ENST00000399649 TRPC6Q9Y210 931 aa13.59□□□□□ -0.23
CACNA1C-219ENST00000399649 TNNI1P19237 187 aa13.59□□□□□ -0.23
CACNA1C-219ENST00000399649 NONOQ15233 471 aaKnown RBP eCLIP13.59□□□□□ -0.23
CACNA1C-219ENST00000399649 CTAGE3PQ8IX95 158 aa13.59□□□□□ -0.23
CACNA1C-219ENST00000399649 C8orf58Q8NAV2 365 aa13.59□□□□□ -0.23
CACNA1C-219ENST00000399649 LZTS2Q9BRK4 669 aa13.59□□□□□ -0.23
CACNA1C-219ENST00000399649 LRWD1Q9UFC0 647 aa13.59□□□□□ -0.23
CACNA1C-219ENST00000399649 KCNG1Q9UIX4 513 aa13.59□□□□□ -0.23
CACNA1C-219ENST00000399649 GGA1Q9UJY5 639 aa13.59□□□□□ -0.23
CACNA1C-219ENST00000399649 ESYT2A0FGR8 921 aa13.58□□□□□ -0.23
CACNA1C-219ENST00000399649 YARSP54577 528 aaKnown RBP13.58□□□□□ -0.23
CACNA1C-219ENST00000399649 CCDC93Q567U6 631 aa13.58□□□□□ -0.23
CACNA1C-219ENST00000399649 TAB2Q9NYJ8 693 aa13.58□□□□□ -0.23
CACNA1C-219ENST00000399649 SEPT10Q9P0V9 454 aa13.58□□□□□ -0.23
CACNA1C-219ENST00000399649 AMFRQ9UKV5 643 aa13.58□□□□□ -0.23
CACNA1C-219ENST00000399649 GOLGA8CPA6NN73 597 aa13.58□□□□□ -0.24
CACNA1C-219ENST00000399649 OPHN1O60890 802 aa13.58□□□□□ -0.24
CACNA1C-219ENST00000399649 NR1I2O75469 434 aa13.58□□□□□ -0.24
CACNA1C-219ENST00000399649 S100BP04271 92 aaPredicted RBP13.58□□□□□ -0.24
CACNA1C-219ENST00000399649 GSTA1P08263 222 aa13.58□□□□□ -0.24
CACNA1C-219ENST00000399649 GSTA2P09210 222 aa13.58□□□□□ -0.24
CACNA1C-219ENST00000399649 JADE1Q6IE81 842 aa13.58□□□□□ -0.24
CACNA1C-219ENST00000399649 CNBD1Q8NA66 436 aa13.58□□□□□ -0.24
CACNA1C-219ENST00000399649 HAUS1Q96CS2 278 aa13.58□□□□□ -0.24
CACNA1C-219ENST00000399649 ZNF277Q9NRM2 450 aaPredicted RBP13.58□□□□□ -0.24
CACNA1C-219ENST00000399649 V9GY48 417 aaPredicted RBP13.58□□□□□ -0.24
CACNA1C-219ENST00000399649 IGSF3O75054 1194 aa13.58□□□□□ -0.24
CACNA1C-219ENST00000399649 PPFIA4O75335 1185 aa13.58□□□□□ -0.24
CACNA1C-219ENST00000399649 ARHGAP44Q17R89 818 aa13.58□□□□□ -0.24
CACNA1C-219ENST00000399649 NFATC2IPQ8NCF5 419 aa13.58□□□□□ -0.24
CACNA1C-219ENST00000399649 BEGAINQ9BUH8 593 aa13.58□□□□□ -0.24
CACNA1C-219ENST00000399649 DISP3Q9P2K9 1392 aa13.58□□□□□ -0.24
CACNA1C-219ENST00000399649 PCDH11XQ9BZA7 1347 aa13.58□□□□□ -0.24
CACNA1C-219ENST00000399649 PCDH11YQ9BZA8 1340 aa13.58□□□□□ -0.24
CACNA1C-219ENST00000399649 RGS16O15492 202 aaPredicted RBP13.58□□□□□ -0.24
CACNA1C-219ENST00000399649 CHMLP26374 656 aa13.58□□□□□ -0.24
CACNA1C-219ENST00000399649 PPARDQ03181 441 aa13.58□□□□□ -0.24
CACNA1C-219ENST00000399649 PHLDB3Q6NSJ2 640 aa13.58□□□□□ -0.24
CACNA1C-219ENST00000399649 NELFCDQ8IXH7 590 aa13.58□□□□□ -0.24
CACNA1C-219ENST00000399649 SMC5Q8IY18 1101 aa13.58□□□□□ -0.24
CACNA1C-219ENST00000399649 EFCC1Q9HA90 598 aa13.58□□□□□ -0.24
CACNA1C-219ENST00000399649 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.57□□□□□ -0.24
CACNA1C-219ENST00000399649 RAD51AP2Q09MP3 1159 aa13.57□□□□□ -0.24
CACNA1C-219ENST00000399649 MIER3Q7Z3K6 550 aa13.57□□□□□ -0.24
CACNA1C-219ENST00000399649 PDZD8Q8NEN9 1154 aa13.57□□□□□ -0.24
CACNA1C-219ENST00000399649 LSM14BQ9BX40 385 aaKnown RBP13.57□□□□□ -0.24
CACNA1C-219ENST00000399649 IPO11Q9UI26 975 aaKnown RBP13.57□□□□□ -0.24
CACNA1C-219ENST00000399649 GNPATO15228 680 aa13.57□□□□□ -0.24
CACNA1C-219ENST00000399649 HADHQ16836 314 aaKnown RBP13.57□□□□□ -0.24
CACNA1C-219ENST00000399649 IQCDQ96DY2 449 aa13.57□□□□□ -0.24
CACNA1C-219ENST00000399649 ABCA10Q8WWZ4 1543 aa13.57□□□□□ -0.24
CACNA1C-219ENST00000399649 GARSP41250 739 aaKnown RBP13.57□□□□□ -0.24
CACNA1C-219ENST00000399649 C14orf93Q9H972 538 aaKnown RBP13.57□□□□□ -0.24
CACNA1C-219ENST00000399649 RIC8AQ9NPQ8 531 aa13.57□□□□□ -0.24
CACNA1C-219ENST00000399649 SLC27A2O14975 620 aa13.57□□□□□ -0.24
CACNA1C-219ENST00000399649 PDZD4Q76G19 769 aaPredicted RBP13.57□□□□□ -0.24
CACNA1C-219ENST00000399649 PRXQ9BXM0 1461 aa13.57□□□□□ -0.24
CACNA1C-219ENST00000399649 ATF7P17544 494 aaPredicted RBP13.57□□□□□ -0.24
CACNA1C-219ENST00000399649 SH3BGRP55822 239 aaPredicted RBP13.57□□□□□ -0.24
CACNA1C-219ENST00000399649 POSTNQ15063 836 aa13.57□□□□□ -0.24
CACNA1C-219ENST00000399649 LRGUKQ96M69 825 aa13.57□□□□□ -0.24
CACNA1C-219ENST00000399649 PSMB7Q99436 277 aa13.57□□□□□ -0.24
CACNA1C-219ENST00000399649 SF3A3Q12874 501 aaKnown RBP eCLIP13.56□□□□□ -0.24
CACNA1C-219ENST00000399649 SCYL2Q6P3W7 929 aa13.56□□□□□ -0.24
CACNA1C-219ENST00000399649 KDM3AQ9Y4C1 1321 aa13.56□□□□□ -0.24
CACNA1C-219ENST00000399649 PALM3A6NDB9 673 aaPredicted RBP13.56□□□□□ -0.24
CACNA1C-219ENST00000399649 CAPN9O14815 690 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms