RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 ZNF18P17022 549 aa12.18□□□□□ -0.46
CACNA1C-210ENST00000399606 SYKP43405 635 aa12.18□□□□□ -0.46
CACNA1C-210ENST00000399606 FMNL3Q8IVF7 1028 aa12.18□□□□□ -0.46
CACNA1C-210ENST00000399606 CHURC1Q8WUH1 139 aa12.18□□□□□ -0.46
CACNA1C-210ENST00000399606 RSRC1Q96IZ7 334 aaKnown RBP12.18□□□□□ -0.46
CACNA1C-210ENST00000399606 CDR2Q01850 454 aa12.18□□□□□ -0.46
CACNA1C-210ENST00000399606 NLGN1Q8N2Q7 840 aa12.18□□□□□ -0.46
CACNA1C-210ENST00000399606 VPS41P49754 854 aa12.17□□□□□ -0.46
CACNA1C-210ENST00000399606 LMBR1Q8WVP7 490 aa12.17□□□□□ -0.46
CACNA1C-210ENST00000399606 PSPC1Q8WXF1 523 aaKnown RBP12.17□□□□□ -0.46
CACNA1C-210ENST00000399606 ARMT1Q9H993 441 aa12.17□□□□□ -0.46
CACNA1C-210ENST00000399606 CTAGE1Q96RT6 745 aa12.17□□□□□ -0.46
CACNA1C-210ENST00000399606 MRPL46Q9H2W6 279 aaKnown RBP12.17□□□□□ -0.46
CACNA1C-210ENST00000399606 KCNK9Q9NPC2 374 aa12.17□□□□□ -0.46
CACNA1C-210ENST00000399606 MAP3K7O43318 606 aa12.17□□□□□ -0.46
CACNA1C-210ENST00000399606 VPS52Q8N1B4 723 aa12.17□□□□□ -0.46
CACNA1C-210ENST00000399606 CASQ2O14958 399 aaPredicted RBP12.17□□□□□ -0.46
CACNA1C-210ENST00000399606 TNNI1P19237 187 aa12.17□□□□□ -0.46
CACNA1C-210ENST00000399606 BSPRYQ5W0U4 402 aa12.17□□□□□ -0.46
CACNA1C-210ENST00000399606 KSR2Q6VAB6 950 aa12.17□□□□□ -0.46
CACNA1C-210ENST00000399606 MYCT1Q8N699 235 aa12.17□□□□□ -0.46
CACNA1C-210ENST00000399606 BCAMP50895 628 aa12.17□□□□□ -0.46
CACNA1C-210ENST00000399606 TFCP2Q12800 502 aa12.17□□□□□ -0.46
CACNA1C-210ENST00000399606 SV2BQ7L1I2 683 aa12.17□□□□□ -0.46
CACNA1C-210ENST00000399606 NUCKS1Q9H1E3 243 aaKnown RBP12.17□□□□□ -0.46
CACNA1C-210ENST00000399606 PA2G4Q9UQ80 394 aaKnown RBP12.17□□□□□ -0.46
CACNA1C-210ENST00000399606 WDR62O43379 1518 aa12.17□□□□□ -0.46
CACNA1C-210ENST00000399606 KDM5DQ9BY66 1539 aa12.17□□□□□ -0.46
CACNA1C-210ENST00000399606 CALUO43852 315 aaPredicted RBP12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 MAN1A1P33908 653 aa12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 PUM3Q15397 648 aaKnown RBP12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 FAM160B1Q5W0V3 765 aa12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 HAUS3Q68CZ6 603 aa12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 BRF1Q92994 677 aa12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 STMN2Q93045 179 aa12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 HMG20BQ9P0W2 317 aa12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 UNC13AQ9UPW8 1703 aa12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 MFSD14BQ5SR56 506 aa12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 CEP85LQ5SZL2 805 aa12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 XAB2Q9HCS7 855 aaKnown RBP12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 UBN1Q9NPG3 1134 aa12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 CPSF2Q9P2I0 782 aaKnown RBP12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 TXNDC9O14530 226 aa12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 TLR3O15455 904 aaKnown RBP12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 MIER3Q7Z3K6 550 aa12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 SRGAP1Q7Z6B7 1085 aa12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 RAD17O75943 681 aa12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 KCNA6P17658 529 aa12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 HSPA1LP34931 641 aa12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 PGBD3Q8N328 593 aa12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 PPFIBP2Q8ND30 876 aa12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 ZMAT2Q96NC0 199 aaKnown RBP12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 TSPYL2Q9H2G4 693 aaPredicted RBP12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 PNMA2Q9UL42 364 aa12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 SEL1L2Q5TEA6 688 aa12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 DCUN1D2Q6PH85 259 aa12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 DPF3Q92784 378 aa12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 TESK2Q96S53 571 aa12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 PPP1R16BQ96T49 567 aa12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 NCAPGQ9BPX3 1015 aa12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 ARFGAP3Q9NP61 516 aa12.16□□□□□ -0.46
CACNA1C-210ENST00000399606 TRIM75PA6NK02 468 aa12.15□□□□□ -0.46
CACNA1C-210ENST00000399606 LACTBP83111 547 aaPredicted RBP12.15□□□□□ -0.46
CACNA1C-210ENST00000399606 KCNH4Q9UQ05 1017 aa12.15□□□□□ -0.46
CACNA1C-210ENST00000399606 KDM5CP41229 1560 aa12.15□□□□□ -0.46
CACNA1C-210ENST00000399606 RNF113AO15541 343 aaKnown RBP12.15□□□□□ -0.46
CACNA1C-210ENST00000399606 Q6ZUG5 572 aa12.15□□□□□ -0.46
CACNA1C-210ENST00000399606 PPP2R3CQ969Q6 453 aa12.15□□□□□ -0.46
CACNA1C-210ENST00000399606 SAMD15Q9P1V8 674 aa12.15□□□□□ -0.46
CACNA1C-210ENST00000399606 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.15□□□□□ -0.46
CACNA1C-210ENST00000399606 TNNC2P02585 160 aa12.15□□□□□ -0.46
CACNA1C-210ENST00000399606 SLC12A2P55011 1212 aa12.15□□□□□ -0.46
CACNA1C-210ENST00000399606 GABPB1Q06547 395 aaPredicted RBP12.15□□□□□ -0.46
CACNA1C-210ENST00000399606 SCYL2Q6P3W7 929 aa12.15□□□□□ -0.46
CACNA1C-210ENST00000399606 AFAP1L2Q8N4X5 818 aa12.15□□□□□ -0.46
CACNA1C-210ENST00000399606 TBC1D22AQ8WUA7 517 aa12.15□□□□□ -0.46
CACNA1C-210ENST00000399606 TRIM27P14373 513 aa12.15□□□□□ -0.46
CACNA1C-210ENST00000399606 SSH1Q8WYL5 1049 aa12.15□□□□□ -0.46
CACNA1C-210ENST00000399606 MTIF3Q9H2K0 278 aaKnown RBP12.15□□□□□ -0.46
CACNA1C-210ENST00000399606 UBASH3AP57075 661 aa12.15□□□□□ -0.46
CACNA1C-210ENST00000399606 ATP11AP98196 1134 aa12.15□□□□□ -0.46
CACNA1C-210ENST00000399606 ERCC6LQ2NKX8 1250 aa12.15□□□□□ -0.46
CACNA1C-210ENST00000399606 SH2D4BQ5SQS7 431 aa12.15□□□□□ -0.46
CACNA1C-210ENST00000399606 INTS4Q96HW7 963 aaKnown RBP12.15□□□□□ -0.46
CACNA1C-210ENST00000399606 SETSIPP0DME0 302 aa12.15□□□□□ -0.47
CACNA1C-210ENST00000399606 NOLC1Q14978 699 aaKnown RBP eCLIP12.15□□□□□ -0.47
CACNA1C-210ENST00000399606 CPLX4Q7Z7G2 160 aa12.15□□□□□ -0.47
CACNA1C-210ENST00000399606 PPP1R12CQ9BZL4 782 aa12.15□□□□□ -0.47
CACNA1C-210ENST00000399606 CTAGE9A4FU28 777 aa12.14□□□□□ -0.47
CACNA1C-210ENST00000399606 TNFAIP3P21580 790 aa12.14□□□□□ -0.47
CACNA1C-210ENST00000399606 TBC1D9Q6ZT07 1266 aa12.14□□□□□ -0.47
CACNA1C-210ENST00000399606 RSRC2Q7L4I2 434 aaKnown RBP12.14□□□□□ -0.47
CACNA1C-210ENST00000399606 TPH2Q8IWU9 490 aa12.14□□□□□ -0.47
CACNA1C-210ENST00000399606 RNF217Q8TC41 542 aa12.14□□□□□ -0.47
CACNA1C-210ENST00000399606 PCDHB15Q9Y5E8 787 aa12.14□□□□□ -0.47
CACNA1C-210ENST00000399606 ANXA13P27216 316 aa12.14□□□□□ -0.47
CACNA1C-210ENST00000399606 TXKP42681 527 aa12.14□□□□□ -0.47
CACNA1C-210ENST00000399606 CWF19L2Q2TBE0 894 aaKnown RBP12.14□□□□□ -0.47
CACNA1C-210ENST00000399606 TMTC4Q5T4D3 741 aa12.14□□□□□ -0.47
CACNA1C-210ENST00000399606 TRIM50Q86XT4 487 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms