RNA–Protein interactions for RNA: ENST00000399601.5

CACNA1C-208, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-208ENST00000399601 RTN1Q16799 776 aa12.31□□□□□ -0.44
CACNA1C-208ENST00000399601 GIMAP6Q6P9H5 292 aa12.31□□□□□ -0.44
CACNA1C-208ENST00000399601 CTAGE1Q96RT6 745 aa12.31□□□□□ -0.44
CACNA1C-208ENST00000399601 NEUROG2Q9H2A3 272 aa12.31□□□□□ -0.44
CACNA1C-208ENST00000399601 MMEL1Q495T6 779 aa12.31□□□□□ -0.44
CACNA1C-208ENST00000399601 WDR44Q5JSH3 913 aa12.31□□□□□ -0.44
CACNA1C-208ENST00000399601 CDCA7LQ96GN5 454 aa12.31□□□□□ -0.44
CACNA1C-208ENST00000399601 PRDM5Q9NQX1 630 aaPredicted RBP12.31□□□□□ -0.44
CACNA1C-208ENST00000399601 MRFAP1Q9Y605 127 aa12.31□□□□□ -0.44
CACNA1C-208ENST00000399601 CCDC141Q6ZP82 1450 aa12.31□□□□□ -0.44
CACNA1C-208ENST00000399601 SYNJ2BP-COX16A0A087WUM0 186 aa12.31□□□□□ -0.44
CACNA1C-208ENST00000399601 RNASELQ05823 741 aaKnown RBP12.31□□□□□ -0.44
CACNA1C-208ENST00000399601 NLRP9Q7RTR0 991 aa12.31□□□□□ -0.44
CACNA1C-208ENST00000399601 DDX17Q92841 729 aaKnown RBP12.31□□□□□ -0.44
CACNA1C-208ENST00000399601 C6orf203Q9P0P8 240 aaPredicted RBP12.31□□□□□ -0.44
CACNA1C-208ENST00000399601 COX16Q9P0S2 106 aa12.31□□□□□ -0.44
CACNA1C-208ENST00000399601 HCLS1P14317 486 aaPredicted RBP12.31□□□□□ -0.44
CACNA1C-208ENST00000399601 SRGAP1Q7Z6B7 1085 aa12.31□□□□□ -0.44
CACNA1C-208ENST00000399601 DHX58Q96C10 678 aa12.31□□□□□ -0.44
CACNA1C-208ENST00000399601 KIAA1107Q9UPP5 1409 aa12.31□□□□□ -0.44
CACNA1C-208ENST00000399601 ERICH3Q5RHP9 1530 aa12.31□□□□□ -0.44
CACNA1C-208ENST00000399601 KIF14Q15058 1648 aa12.31□□□□□ -0.44
CACNA1C-208ENST00000399601 GCP02774 474 aa12.31□□□□□ -0.44
CACNA1C-208ENST00000399601 SUPT20HL1Q3ZLR7 823 aa12.31□□□□□ -0.44
CACNA1C-208ENST00000399601 ANGPTL8Q6UXH0 198 aa12.31□□□□□ -0.44
CACNA1C-208ENST00000399601 RYBPQ8N488 228 aaPredicted RBP12.31□□□□□ -0.44
CACNA1C-208ENST00000399601 LRGUKQ96M69 825 aa12.31□□□□□ -0.44
CACNA1C-208ENST00000399601 FGD4Q96M96 766 aa12.31□□□□□ -0.44
CACNA1C-208ENST00000399601 SPATS2LQ9NUQ6 558 aaKnown RBP12.31□□□□□ -0.44
CACNA1C-208ENST00000399601 SBNO2Q9Y2G9 1366 aa12.3□□□□□ -0.44
CACNA1C-208ENST00000399601 TBC1D12O60347 775 aa12.3□□□□□ -0.44
CACNA1C-208ENST00000399601 GNAT2P19087 354 aa12.3□□□□□ -0.44
CACNA1C-208ENST00000399601 CALML3P27482 149 aa12.3□□□□□ -0.44
CACNA1C-208ENST00000399601 Q3C1V9 767 aa12.3□□□□□ -0.44
CACNA1C-208ENST00000399601 ZC3H12BQ5HYM0 836 aaKnown RBP12.3□□□□□ -0.44
CACNA1C-208ENST00000399601 HS2ST1Q7LGA3 356 aa12.3□□□□□ -0.44
CACNA1C-208ENST00000399601 NLGN1Q8N2Q7 840 aa12.3□□□□□ -0.44
CACNA1C-208ENST00000399601 PALMDQ9NP74 551 aa12.3□□□□□ -0.44
CACNA1C-208ENST00000399601 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.3□□□□□ -0.44
CACNA1C-208ENST00000399601 SDCCAG3Q96C92 435 aa12.3□□□□□ -0.44
CACNA1C-208ENST00000399601 BAIAP2L1Q9UHR4 511 aa12.3□□□□□ -0.44
CACNA1C-208ENST00000399601 MAGI1Q96QZ7 1491 aaPredicted RBP12.3□□□□□ -0.44
CACNA1C-208ENST00000399601 KRT79Q5XKE5 535 aa12.3□□□□□ -0.44
CACNA1C-208ENST00000399601 TRMT10CQ7L0Y3 403 aaKnown RBP12.3□□□□□ -0.44
CACNA1C-208ENST00000399601 CERS3Q8IU89 383 aa12.3□□□□□ -0.44
CACNA1C-208ENST00000399601 LMCD1Q9NZU5 365 aa12.3□□□□□ -0.44
CACNA1C-208ENST00000399601 GSTA4O15217 222 aa12.3□□□□□ -0.44
CACNA1C-208ENST00000399601 GSDMDP57764 484 aa12.3□□□□□ -0.44
CACNA1C-208ENST00000399601 NEK11Q8NG66 645 aa12.3□□□□□ -0.44
CACNA1C-208ENST00000399601 LMBR1Q8WVP7 490 aa12.3□□□□□ -0.44
CACNA1C-208ENST00000399601 GCNAQ96QF7 691 aa12.3□□□□□ -0.44
CACNA1C-208ENST00000399601 LRRC2Q9BYS8 371 aa12.3□□□□□ -0.44
CACNA1C-208ENST00000399601 VPS37BQ9H9H4 285 aa12.3□□□□□ -0.44
CACNA1C-208ENST00000399601 RIMS2Q9UQ26 1411 aa12.3□□□□□ -0.44
CACNA1C-208ENST00000399601 PSDA5PKW4 1024 aaPredicted RBP12.3□□□□□ -0.44
CACNA1C-208ENST00000399601 STX10O60499 249 aa12.3□□□□□ -0.44
CACNA1C-208ENST00000399601 XPAP23025 273 aaPredicted RBP12.3□□□□□ -0.44
CACNA1C-208ENST00000399601 PIK3R5Q8WYR1 880 aa12.3□□□□□ -0.44
CACNA1C-208ENST00000399601 GEMIN8Q9NWZ8 242 aaKnown RBP12.3□□□□□ -0.44
CACNA1C-208ENST00000399601 DOK7Q18PE1 504 aa12.29□□□□□ -0.44
CACNA1C-208ENST00000399601 USH1GQ495M9 461 aa12.29□□□□□ -0.44
CACNA1C-208ENST00000399601 SUCLA2Q9P2R7 463 aaPredicted RBP12.29□□□□□ -0.44
CACNA1C-208ENST00000399601 BRD4O60885 1362 aaPredicted RBP12.29□□□□□ -0.44
CACNA1C-208ENST00000399601 PLEKHG3A1L390 1219 aa12.29□□□□□ -0.44
CACNA1C-208ENST00000399601 MCM5P33992 734 aa12.29□□□□□ -0.44
CACNA1C-208ENST00000399601 RILPL1Q5EBL4 403 aa12.29□□□□□ -0.44
CACNA1C-208ENST00000399601 SMAP1Q8IYB5 467 aaPredicted RBP12.29□□□□□ -0.44
CACNA1C-208ENST00000399601 RTEL1Q9NZ71 1219 aa12.29□□□□□ -0.44
CACNA1C-208ENST00000399601 FAM95CA0A1B0GW59 222 aa12.29□□□□□ -0.44
CACNA1C-208ENST00000399601 PDE4DQ08499 809 aa12.29□□□□□ -0.44
CACNA1C-208ENST00000399601 ERFEQ4G0M1 354 aa12.29□□□□□ -0.44
CACNA1C-208ENST00000399601 GPR161Q8N6U8 529 aaKnown RBP12.29□□□□□ -0.44
CACNA1C-208ENST00000399601 EEF1B2P24534 225 aaKnown RBP12.29□□□□□ -0.44
CACNA1C-208ENST00000399601 PTPROQ16827 1216 aa12.29□□□□□ -0.44
CACNA1C-208ENST00000399601 AOPEPQ8N6M6 819 aa12.29□□□□□ -0.44
CACNA1C-208ENST00000399601 PSMB7Q99436 277 aa12.29□□□□□ -0.44
CACNA1C-208ENST00000399601 CARD10Q9BWT7 1032 aa12.29□□□□□ -0.44
CACNA1C-208ENST00000399601 EHBP1L1Q8N3D4 1523 aa12.29□□□□□ -0.44
CACNA1C-208ENST00000399601 ZBTB43O43298 467 aa12.29□□□□□ -0.44
CACNA1C-208ENST00000399601 IL15P40933 162 aaPredicted RBP12.29□□□□□ -0.44
CACNA1C-208ENST00000399601 KCTD2Q14681 263 aa12.29□□□□□ -0.44
CACNA1C-208ENST00000399601 ARHGEF16Q5VV41 709 aa12.29□□□□□ -0.44
CACNA1C-208ENST00000399601 KLHDC4Q8TBB5 520 aa12.29□□□□□ -0.44
CACNA1C-208ENST00000399601 HPS4Q9NQG7 708 aa12.29□□□□□ -0.44
CACNA1C-208ENST00000399601 RAD51AP2Q09MP3 1159 aa12.28□□□□□ -0.44
CACNA1C-208ENST00000399601 ZNF467Q7Z7K2 595 aaPredicted RBP12.28□□□□□ -0.44
CACNA1C-208ENST00000399601 PRPF6O94906 941 aaKnown RBP12.28□□□□□ -0.44
CACNA1C-208ENST00000399601 KCNA1Q09470 495 aa12.28□□□□□ -0.44
CACNA1C-208ENST00000399601 ANO6Q4KMQ2 910 aa12.28□□□□□ -0.44
CACNA1C-208ENST00000399601 PIP4K2CQ8TBX8 421 aa12.28□□□□□ -0.44
CACNA1C-208ENST00000399601 RPS6KC1Q96S38 1066 aa12.28□□□□□ -0.44
CACNA1C-208ENST00000399601 RASSF4Q9H2L5 321 aa12.28□□□□□ -0.44
CACNA1C-208ENST00000399601 EEF1DP29692 281 aaKnown RBP12.28□□□□□ -0.44
CACNA1C-208ENST00000399601 IREB2P48200 963 aaKnown RBP12.28□□□□□ -0.44
CACNA1C-208ENST00000399601 ARHGAP44Q17R89 818 aa12.28□□□□□ -0.44
CACNA1C-208ENST00000399601 FAM186BQ8IYM0 893 aa12.28□□□□□ -0.44
CACNA1C-208ENST00000399601 SLC17A8Q8NDX2 589 aa12.28□□□□□ -0.44
CACNA1C-208ENST00000399601 INPP5FQ9Y2H2 1132 aa12.28□□□□□ -0.44
CACNA1C-208ENST00000399601 RTL9Q8NET4 1388 aa12.28□□□□□ -0.44
CACNA1C-208ENST00000399601 KRT15P19012 456 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms