RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 CFAP99D6REC4 459 aa7.22□□□□□ -1.25
TRAPPC13-202ENST00000399438 CALD1Q05682 793 aaKnown RBP7.22□□□□□ -1.25
TRAPPC13-202ENST00000399438 C11orf74Q86VG3 221 aa7.22□□□□□ -1.25
TRAPPC13-202ENST00000399438 UNC5CLQ8IV45 518 aa7.22□□□□□ -1.25
TRAPPC13-202ENST00000399438 ZNF713Q8N859 430 aaPredicted RBP7.22□□□□□ -1.25
TRAPPC13-202ENST00000399438 PNMA1Q8ND90 353 aa7.22□□□□□ -1.25
TRAPPC13-202ENST00000399438 UPF3BQ9BZI7 483 aaKnown RBP7.22□□□□□ -1.25
TRAPPC13-202ENST00000399438 RXRGP48443 463 aa7.21□□□□□ -1.26
TRAPPC13-202ENST00000399438 RENBPP51606 427 aa7.21□□□□□ -1.26
TRAPPC13-202ENST00000399438 TM4SF20Q53R12 229 aa7.21□□□□□ -1.26
TRAPPC13-202ENST00000399438 C1orf122Q6ZSJ8 110 aa7.21□□□□□ -1.26
TRAPPC13-202ENST00000399438 MAATS1Q7Z4T9 603 aa7.21□□□□□ -1.26
TRAPPC13-202ENST00000399438 CELF2-AS1Q8N7Q2 184 aa7.21□□□□□ -1.26
TRAPPC13-202ENST00000399438 PJA1Q8NG27 643 aa7.21□□□□□ -1.26
TRAPPC13-202ENST00000399438 SMARCC1Q92922 1105 aaPredicted RBP7.21□□□□□ -1.26
TRAPPC13-202ENST00000399438 SH3KBP1Q96B97 665 aa7.21□□□□□ -1.26
TRAPPC13-202ENST00000399438 ALKBH8Q96BT7 664 aaKnown RBP7.21□□□□□ -1.26
TRAPPC13-202ENST00000399438 SARGQ9BW04 601 aa7.21□□□□□ -1.26
TRAPPC13-202ENST00000399438 CCDC113Q9H0I3 377 aa7.21□□□□□ -1.26
TRAPPC13-202ENST00000399438 PXDNQ92626 1479 aa7.21□□□□□ -1.26
TRAPPC13-202ENST00000399438 PIK3C2AO00443 1686 aa7.21□□□□□ -1.26
TRAPPC13-202ENST00000399438 ROBO1Q9Y6N7 1651 aa7.21□□□□□ -1.26
TRAPPC13-202ENST00000399438 IPO5O00410 1097 aaKnown RBP7.21□□□□□ -1.26
TRAPPC13-202ENST00000399438 DNAJB2P25686 324 aa7.21□□□□□ -1.26
TRAPPC13-202ENST00000399438 CASQ1P31415 396 aa7.21□□□□□ -1.26
TRAPPC13-202ENST00000399438 NASPP49321 788 aaPredicted RBP7.21□□□□□ -1.26
TRAPPC13-202ENST00000399438 GUCY2FP51841 1108 aa7.21□□□□□ -1.26
TRAPPC13-202ENST00000399438 BMP2KLQ5H9B9 411 aa7.21□□□□□ -1.26
TRAPPC13-202ENST00000399438 PADI6Q6TGC4 694 aa7.21□□□□□ -1.26
TRAPPC13-202ENST00000399438 STK11IPQ8N1F8 1099 aa7.21□□□□□ -1.26
TRAPPC13-202ENST00000399438 ACRBPQ8NEB7 543 aa7.21□□□□□ -1.26
TRAPPC13-202ENST00000399438 DMRTB1Q96MA1 342 aa7.21□□□□□ -1.26
TRAPPC13-202ENST00000399438 STK31Q9BXU1 1019 aa7.21□□□□□ -1.26
TRAPPC13-202ENST00000399438 DNAAF2Q9NVR5 837 aaKnown RBP7.21□□□□□ -1.26
TRAPPC13-202ENST00000399438 MARF1Q9Y4F3 1742 aaKnown RBP7.21□□□□□ -1.26
TRAPPC13-202ENST00000399438 A0A087X0B3 334 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 HOXC9P31274 260 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 NFKB2Q00653 900 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 C21orf62-AS1Q17RA5 79 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 BRINP3Q76B58 766 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 ZNF354CQ86Y25 554 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 BRSK2Q8IWQ3 736 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 CHAC2Q8WUX2 184 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 CITED4Q96RK1 184 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 NBPF3Q9H094 633 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 IL25Q9H293 177 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 OBP2AQ9NY56 170 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 CHMP5Q9NZZ3 219 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 AHDC1Q5TGY3 1603 aaPredicted RBP7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 MPSTP25325 297 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 ATP2B2Q01814 1243 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 SLC39A6Q13433 755 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 ZFPM2Q8WW38 1151 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 SCLT1Q96NL6 688 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 MAP3K14Q99558 947 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 CSRNP2Q9H175 543 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 COPRSQ9NQ92 184 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 ALS2Q96Q42 1657 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 FAM13AO94988 1023 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 CPA1P15085 419 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 STT3AP46977 705 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 BPIFB3P59826 476 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 APOBRQ0VD83 1088 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 NAA30Q147X3 362 aaPredicted RBP7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 PROSER3Q2NL68 480 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 C2orf27AQ580R0 203 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 TTC22Q5TAA0 569 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 FBF1Q8TES7 1133 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 GCC1Q96CN9 775 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 FAM167BQ9BTA0 163 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 DCTPP1Q9H773 170 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 SMYD2Q9NRG4 433 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 PALD1Q9ULE6 856 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 PCDHGB3Q9Y5G1 929 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 DGKBQ9Y6T7 804 aa7.2□□□□□ -1.26
TRAPPC13-202ENST00000399438 RTL1A6NKG5 1358 aa7.19□□□□□ -1.26
TRAPPC13-202ENST00000399438 FZD6O60353 706 aa7.19□□□□□ -1.26
TRAPPC13-202ENST00000399438 INMTO95050 263 aa7.19□□□□□ -1.26
TRAPPC13-202ENST00000399438 XRCC6P12956 609 aaKnown RBP eCLIP7.19□□□□□ -1.26
TRAPPC13-202ENST00000399438 CD151P48509 253 aa7.19□□□□□ -1.26
TRAPPC13-202ENST00000399438 ROR1Q01973 937 aa7.19□□□□□ -1.26
TRAPPC13-202ENST00000399438 LAMC2Q13753 1193 aa7.19□□□□□ -1.26
TRAPPC13-202ENST00000399438 GFOD2Q3B7J2 385 aa7.19□□□□□ -1.26
TRAPPC13-202ENST00000399438 PLBD1Q6P4A8 553 aa7.19□□□□□ -1.26
TRAPPC13-202ENST00000399438 TOGARAM2Q6ZUX3 1019 aa7.19□□□□□ -1.26
TRAPPC13-202ENST00000399438 PHTF2Q8N3S3 785 aa7.19□□□□□ -1.26
TRAPPC13-202ENST00000399438 UBR7Q8N806 425 aa7.19□□□□□ -1.26
TRAPPC13-202ENST00000399438 ANKRD44Q8N8A2 993 aa7.19□□□□□ -1.26
TRAPPC13-202ENST00000399438 JMYQ8N9B5 988 aa7.19□□□□□ -1.26
TRAPPC13-202ENST00000399438 PLPP7Q8NBV4 271 aa7.19□□□□□ -1.26
TRAPPC13-202ENST00000399438 CNNM2Q9H8M5 875 aa7.19□□□□□ -1.26
TRAPPC13-202ENST00000399438 PLCB1Q9NQ66 1216 aa7.19□□□□□ -1.26
TRAPPC13-202ENST00000399438 TTC21AQ8NDW8 1320 aa7.19□□□□□ -1.26
TRAPPC13-202ENST00000399438 PNMA6FA0A0J9YX94 578 aa7.19□□□□□ -1.26
TRAPPC13-202ENST00000399438 ASMTLO95671 621 aa7.19□□□□□ -1.26
TRAPPC13-202ENST00000399438 NBPF7P0C2Y1 421 aaPredicted RBP7.19□□□□□ -1.26
TRAPPC13-202ENST00000399438 DDIT3P35638 169 aa7.19□□□□□ -1.26
TRAPPC13-202ENST00000399438 DGKGP49619 791 aa7.19□□□□□ -1.26
TRAPPC13-202ENST00000399438 DDB1Q16531 1140 aa7.19□□□□□ -1.26
TRAPPC13-202ENST00000399438 RNF180Q86T96 592 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms