RNA–Protein interactions for RNA: ENST00000399395.7

SDR39U1-201, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR39U1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-201ENST00000399395 USP17L17D6RBQ6 530 aa21.42■■□□□ 1.02
SDR39U1-201ENST00000399395 USP17L19D6RCP7 530 aa21.42■■□□□ 1.02
SDR39U1-201ENST00000399395 USP17L20D6RJB6 530 aa21.42■■□□□ 1.02
SDR39U1-201ENST00000399395 GLRX3O76003 335 aaKnown RBP21.42■■□□□ 1.02
SDR39U1-201ENST00000399395 CCNA1P78396 465 aa21.42■■□□□ 1.02
SDR39U1-201ENST00000399395 USP17L24Q0WX57 530 aa21.42■■□□□ 1.02
SDR39U1-201ENST00000399395 TTF1Q15361 905 aaPredicted RBP21.42■■□□□ 1.02
SDR39U1-201ENST00000399395 CERKLQ49MI3 558 aaPredicted RBP21.42■■□□□ 1.02
SDR39U1-201ENST00000399395 MAP3K21Q5TCX8 1036 aa21.42■■□□□ 1.02
SDR39U1-201ENST00000399395 PORCNQ9H237 461 aa21.42■■□□□ 1.02
SDR39U1-201ENST00000399395 POLR3DP05423 398 aaPredicted RBP21.41■■□□□ 1.02
SDR39U1-201ENST00000399395 WDR78Q5VTH9 848 aa21.41■■□□□ 1.02
SDR39U1-201ENST00000399395 IL1RAPL2Q9NP60 686 aa21.41■■□□□ 1.02
SDR39U1-201ENST00000399395 STAP2Q9UGK3 403 aa21.41■■□□□ 1.02
SDR39U1-201ENST00000399395 OGDHLQ9ULD0 1010 aa21.41■■□□□ 1.02
SDR39U1-201ENST00000399395 RABGAP1Q9Y3P9 1069 aa21.41■■□□□ 1.02
SDR39U1-201ENST00000399395 MAGEB6P1A0A0J9YX57 407 aa21.4■■□□□ 1.02
SDR39U1-201ENST00000399395 Q3C1V9 767 aa21.4■■□□□ 1.02
SDR39U1-201ENST00000399395 PANK1Q8TE04 598 aa21.4■■□□□ 1.02
SDR39U1-201ENST00000399395 CRNKL1Q9BZJ0 848 aaKnown RBP21.4■■□□□ 1.02
SDR39U1-201ENST00000399395 KIAA1683Q9H0B3 1180 aa21.4■■□□□ 1.02
SDR39U1-201ENST00000399395 ZMYND8Q9ULU4 1186 aaPredicted RBP21.4■■□□□ 1.02
SDR39U1-201ENST00000399395 RANBP2P49792 3224 aaKnown RBP21.4■■□□□ 1.02
SDR39U1-201ENST00000399395 VCAM1P19320 739 aa21.39■■□□□ 1.01
SDR39U1-201ENST00000399395 CLASRPQ8N2M8 674 aaKnown RBP21.39■■□□□ 1.01
SDR39U1-201ENST00000399395 RIOK1Q9BRS2 568 aaKnown RBP21.39■■□□□ 1.01
SDR39U1-201ENST00000399395 MS4A1P11836 297 aa21.38■■□□□ 1.01
SDR39U1-201ENST00000399395 CACNB2Q08289 660 aaPredicted RBP21.38■■□□□ 1.01
SDR39U1-201ENST00000399395 MAP2K5Q13163 448 aa21.38■■□□□ 1.01
SDR39U1-201ENST00000399395 MORN1Q5T089 497 aa21.38■■□□□ 1.01
SDR39U1-201ENST00000399395 RHPN1Q8TCX5 695 aa21.38■■□□□ 1.01
SDR39U1-201ENST00000399395 USP6NLQ92738 828 aa21.38■■□□□ 1.01
SDR39U1-201ENST00000399395 DNAJC2Q99543 621 aaKnown RBP21.38■■□□□ 1.01
SDR39U1-201ENST00000399395 IVNS1ABPQ9Y6Y0 642 aa21.38■■□□□ 1.01
SDR39U1-201ENST00000399395 APBB1O00213 710 aa21.37■■□□□ 1.01
SDR39U1-201ENST00000399395 HMMRO75330 724 aa21.37■■□□□ 1.01
SDR39U1-201ENST00000399395 PDE6AP16499 860 aa21.37■■□□□ 1.01
SDR39U1-201ENST00000399395 SHMT1P34896 483 aa21.37■■□□□ 1.01
SDR39U1-201ENST00000399395 CCL14Q16627 93 aa21.37■■□□□ 1.01
SDR39U1-201ENST00000399395 SLC9C2Q5TAH2 1124 aa21.37■■□□□ 1.01
SDR39U1-201ENST00000399395 MFSD14CQ5VZR4 134 aa21.37■■□□□ 1.01
SDR39U1-201ENST00000399395 CATSPERGQ6ZRH7 1159 aa21.37■■□□□ 1.01
SDR39U1-201ENST00000399395 ACER1Q8TDN7 264 aa21.37■■□□□ 1.01
SDR39U1-201ENST00000399395 MCM9Q9NXL9 1143 aa21.37■■□□□ 1.01
SDR39U1-201ENST00000399395 ZBED9Q6R2W3 1325 aa21.36■■□□□ 1.01
SDR39U1-201ENST00000399395 MPHOSPH10O00566 681 aaKnown RBP21.36■■□□□ 1.01
SDR39U1-201ENST00000399395 IFIT2P09913 472 aaKnown RBP21.36■■□□□ 1.01
SDR39U1-201ENST00000399395 MNX1P50219 401 aaPredicted RBP21.36■■□□□ 1.01
SDR39U1-201ENST00000399395 PLCD1P51178 756 aa21.36■■□□□ 1.01
SDR39U1-201ENST00000399395 KIF1BPQ96EK5 621 aa21.36■■□□□ 1.01
SDR39U1-201ENST00000399395 BCL11AQ9H165 835 aa21.36■■□□□ 1.01
SDR39U1-201ENST00000399395 RPAP3Q9H6T3 665 aaPredicted RBP21.36■■□□□ 1.01
SDR39U1-201ENST00000399395 SLC15A5A6NIM6 579 aa21.35■■□□□ 1.01
SDR39U1-201ENST00000399395 GOLIM4O00461 696 aa21.35■■□□□ 1.01
SDR39U1-201ENST00000399395 CNMDO75829 334 aa21.35■■□□□ 1.01
SDR39U1-201ENST00000399395 SYN1P17600 705 aa21.35■■□□□ 1.01
SDR39U1-201ENST00000399395 CCND3P30281 292 aaPredicted RBP21.35■■□□□ 1.01
SDR39U1-201ENST00000399395 POTEEQ6S8J3 1075 aa21.35■■□□□ 1.01
SDR39U1-201ENST00000399395 LBX2Q6XYB7 198 aa21.35■■□□□ 1.01
SDR39U1-201ENST00000399395 EDC3Q96F86 508 aaKnown RBP21.35■■□□□ 1.01
SDR39U1-201ENST00000399395 GDF15Q99988 308 aa21.35■■□□□ 1.01
SDR39U1-201ENST00000399395 PFASO15067 1338 aa21.34■■□□□ 1.01
SDR39U1-201ENST00000399395 ZNF532Q9HCE3 1301 aa21.34■■□□□ 1.01
SDR39U1-201ENST00000399395 BMP8BP34820 402 aa21.34■■□□□ 1.01
SDR39U1-201ENST00000399395 SEPT2Q15019 361 aa21.34■■□□□ 1.01
SDR39U1-201ENST00000399395 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.34■■□□□ 1.01
SDR39U1-201ENST00000399395 SPDYE16A6NNV3 312 aaPredicted RBP21.33■■□□□ 1.01
SDR39U1-201ENST00000399395 SOX1O00570 391 aaPredicted RBP21.33■■□□□ 1.01
SDR39U1-201ENST00000399395 PTPREP23469 700 aa21.33■■□□□ 1.01
SDR39U1-201ENST00000399395 GABPAQ06546 454 aa21.33■■□□□ 1.01
SDR39U1-201ENST00000399395 LRCH3Q96II8 777 aa21.33■■□□□ 1.01
SDR39U1-201ENST00000399395 TANGO6Q9C0B7 1094 aa21.33■■□□□ 1.01
SDR39U1-201ENST00000399395 FRMPD3Q5JV73 1810 aa21.33■■□□□ 1.01
SDR39U1-201ENST00000399395 MYH8P13535 1937 aa21.33■■□□□ 1
SDR39U1-201ENST00000399395 MAGEA10P43363 369 aaPredicted RBP21.32■■□□□ 1
SDR39U1-201ENST00000399395 ATP2B2Q01814 1243 aa21.32■■□□□ 1
SDR39U1-201ENST00000399395 RPAP2Q8IXW5 612 aaPredicted RBP21.32■■□□□ 1
SDR39U1-201ENST00000399395 SDR42E1Q8WUS8 393 aa21.32■■□□□ 1
SDR39U1-201ENST00000399395 BTBD7Q9P203 1132 aa21.32■■□□□ 1
SDR39U1-201ENST00000399395 DDX19BQ9UMR2 479 aa21.32■■□□□ 1
SDR39U1-201ENST00000399395 GUCY1A2P33402 732 aa21.31■■□□□ 1
SDR39U1-201ENST00000399395 GRB14Q14449 540 aa21.31■■□□□ 1
SDR39U1-201ENST00000399395 LHX8Q68G74 356 aa21.31■■□□□ 1
SDR39U1-201ENST00000399395 TMEM179Q6ZVK1 233 aa21.31■■□□□ 1
SDR39U1-201ENST00000399395 LCORLQ8N3X6 602 aa21.31■■□□□ 1
SDR39U1-201ENST00000399395 SWAP70Q9UH65 585 aa21.31■■□□□ 1
SDR39U1-201ENST00000399395 SZT2Q5T011 3432 aa21.3■■□□□ 1
SDR39U1-201ENST00000399395 MSCO60682 206 aa21.3■■□□□ 1
SDR39U1-201ENST00000399395 RAB11FIP3O75154 756 aa21.3■■□□□ 1
SDR39U1-201ENST00000399395 COL6A1P12109 1028 aa21.3■■□□□ 1
SDR39U1-201ENST00000399395 CNGA1P29973 690 aa21.3■■□□□ 1
SDR39U1-201ENST00000399395 AMOTL1Q8IY63 956 aa21.3■■□□□ 1
SDR39U1-201ENST00000399395 DCP1AQ9NPI6 582 aaPredicted RBP21.3■■□□□ 1
SDR39U1-201ENST00000399395 TCRBV5S4A2TA0A5A2 114 aa21.29■■□□□ 1
SDR39U1-201ENST00000399395 HOXC6P09630 235 aa21.29■■□□□ 1
SDR39U1-201ENST00000399395 COG2Q14746 738 aa21.29■■□□□ 1
SDR39U1-201ENST00000399395 UBE2OQ9C0C9 1292 aaKnown RBP21.29■■□□□ 1
SDR39U1-201ENST00000399395 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.29■■□□□ 1
SDR39U1-201ENST00000399395 CHMP4BQ9H444 224 aaKnown RBP21.29■■□□□ 1
SDR39U1-201ENST00000399395 SH2D4AQ9H788 454 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms