RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 CUL4AQ13619 759 aa15.17■□□□□ 0.02
TOP3B-202ENST00000398793 ZNF654Q8IZM8 581 aa15.17■□□□□ 0.02
TOP3B-202ENST00000398793 IGDCC4Q8TDY8 1250 aa15.17■□□□□ 0.02
TOP3B-202ENST00000398793 C8orf76Q96K31 380 aa15.17■□□□□ 0.02
TOP3B-202ENST00000398793 ZSCAN31Q96LW9 406 aaPredicted RBP15.17■□□□□ 0.02
TOP3B-202ENST00000398793 ALG1Q9BT22 464 aa15.17■□□□□ 0.02
TOP3B-202ENST00000398793 TSPY26PQ9H489 355 aa15.17■□□□□ 0.02
TOP3B-202ENST00000398793 SH2B2O14492 632 aaPredicted RBP15.16■□□□□ 0.02
TOP3B-202ENST00000398793 TERF2Q15554 542 aa15.16■□□□□ 0.02
TOP3B-202ENST00000398793 NOM1Q5C9Z4 860 aaKnown RBP15.16■□□□□ 0.02
TOP3B-202ENST00000398793 AKR1B1P15121 316 aa15.16■□□□□ 0.02
TOP3B-202ENST00000398793 GNAT2P19087 354 aa15.16■□□□□ 0.02
TOP3B-202ENST00000398793 IARSP41252 1262 aaKnown RBP15.16■□□□□ 0.02
TOP3B-202ENST00000398793 CDK8P49336 464 aa15.16■□□□□ 0.02
TOP3B-202ENST00000398793 GPR162Q16538 588 aa15.16■□□□□ 0.02
TOP3B-202ENST00000398793 RTN1Q16799 776 aa15.16■□□□□ 0.02
TOP3B-202ENST00000398793 SH2B1Q9NRF2 756 aaPredicted RBP15.16■□□□□ 0.02
TOP3B-202ENST00000398793 MRVI1Q9Y6F6 885 aa15.16■□□□□ 0.02
TOP3B-202ENST00000398793 HMGB1P09429 215 aaKnown RBP15.15■□□□□ 0.02
TOP3B-202ENST00000398793 RHBDL3P58872 404 aa15.15■□□□□ 0.02
TOP3B-202ENST00000398793 GSTO1P78417 241 aa15.15■□□□□ 0.02
TOP3B-202ENST00000398793 AKAP17AQ02040 695 aaKnown RBP15.15■□□□□ 0.02
TOP3B-202ENST00000398793 DLGAP5Q15398 846 aa15.15■□□□□ 0.02
TOP3B-202ENST00000398793 APOBEC3HQ6NTF7 200 aaKnown RBP15.15■□□□□ 0.02
TOP3B-202ENST00000398793 ZSCAN10Q96SZ4 725 aaPredicted RBP15.15■□□□□ 0.02
TOP3B-202ENST00000398793 KLRG2A4D1S0 409 aaPredicted RBP15.15■□□□□ 0.02
TOP3B-202ENST00000398793 FAM205CA6NFA0 338 aa15.15■□□□□ 0.02
TOP3B-202ENST00000398793 F13A1P00488 732 aa15.15■□□□□ 0.02
TOP3B-202ENST00000398793 FDPSP14324 419 aaKnown RBP15.15■□□□□ 0.02
TOP3B-202ENST00000398793 TNNT3P45378 269 aaPredicted RBP15.15■□□□□ 0.02
TOP3B-202ENST00000398793 NR5A1Q13285 461 aa15.15■□□□□ 0.02
TOP3B-202ENST00000398793 DACT2Q5SW24 774 aa15.15■□□□□ 0.02
TOP3B-202ENST00000398793 STYK1Q6J9G0 422 aa15.15■□□□□ 0.02
TOP3B-202ENST00000398793 USP25Q9UHP3 1055 aa15.15■□□□□ 0.02
TOP3B-202ENST00000398793 NFKBIEO00221 500 aa15.15■□□□□ 0.02
TOP3B-202ENST00000398793 WDHD1O75717 1129 aaPredicted RBP15.15■□□□□ 0.02
TOP3B-202ENST00000398793 ISM2Q6H9L7 571 aa15.15■□□□□ 0.02
TOP3B-202ENST00000398793 KCTD1Q719H9 257 aa15.15■□□□□ 0.02
TOP3B-202ENST00000398793 PODNQ7Z5L7 613 aa15.15■□□□□ 0.02
TOP3B-202ENST00000398793 CSRNP1Q96S65 589 aa15.15■□□□□ 0.02
TOP3B-202ENST00000398793 KRT23Q9C075 422 aa15.15■□□□□ 0.02
TOP3B-202ENST00000398793 WDR33Q9C0J8 1336 aaKnown RBP15.14■□□□□ 0.01
TOP3B-202ENST00000398793 IRS2Q9Y4H2 1338 aa15.14■□□□□ 0.01
TOP3B-202ENST00000398793 CCDC96Q2M329 555 aa15.14■□□□□ 0.01
TOP3B-202ENST00000398793 C7orf43Q8WVR3 580 aa15.14■□□□□ 0.01
TOP3B-202ENST00000398793 CEP95Q96GE4 821 aa15.14■□□□□ 0.01
TOP3B-202ENST00000398793 KAT14Q9H8E8 782 aa15.14■□□□□ 0.01
TOP3B-202ENST00000398793 CWC22Q9HCG8 908 aaKnown RBP15.14■□□□□ 0.01
TOP3B-202ENST00000398793 DDNO94850 711 aaPredicted RBP15.14■□□□□ 0.01
TOP3B-202ENST00000398793 PRELPP51888 382 aa15.14■□□□□ 0.01
TOP3B-202ENST00000398793 TRMT1LQ7Z2T5 733 aaKnown RBP15.14■□□□□ 0.01
TOP3B-202ENST00000398793 PGBD1Q96JS3 809 aa15.14■□□□□ 0.01
TOP3B-202ENST00000398793 SPON1Q9HCB6 807 aa15.14■□□□□ 0.01
TOP3B-202ENST00000398793 CHD4Q14839 1912 aa15.14■□□□□ 0.01
TOP3B-202ENST00000398793 TULP1O00294 542 aaPredicted RBP15.13■□□□□ 0.01
TOP3B-202ENST00000398793 TULP2O00295 520 aa15.13■□□□□ 0.01
TOP3B-202ENST00000398793 SEMA3EO15041 775 aa15.13■□□□□ 0.01
TOP3B-202ENST00000398793 BRD1O95696 1058 aa15.13■□□□□ 0.01
TOP3B-202ENST00000398793 SLC3A2P08195 630 aaKnown RBP15.13■□□□□ 0.01
TOP3B-202ENST00000398793 C12orf60Q5U649 245 aa15.13■□□□□ 0.01
TOP3B-202ENST00000398793 BICD2Q8TD16 824 aa15.13■□□□□ 0.01
TOP3B-202ENST00000398793 RNF41Q9H4P4 317 aaPredicted RBP15.13■□□□□ 0.01
TOP3B-202ENST00000398793 SPTLC3Q9NUV7 552 aa15.13■□□□□ 0.01
TOP3B-202ENST00000398793 ADAMTS3O15072 1205 aa15.13■□□□□ 0.01
TOP3B-202ENST00000398793 NCBP1Q09161 790 aaKnown RBP15.13■□□□□ 0.01
TOP3B-202ENST00000398793 CATIPQ7Z7H3 387 aa15.13■□□□□ 0.01
TOP3B-202ENST00000398793 TBC1D22AQ8WUA7 517 aa15.13■□□□□ 0.01
TOP3B-202ENST00000398793 ZNF408Q9H9D4 720 aa15.13■□□□□ 0.01
TOP3B-202ENST00000398793 IL17RBQ9NRM6 502 aa15.13■□□□□ 0.01
TOP3B-202ENST00000398793 SF3A1Q15459 793 aaKnown RBP15.12■□□□□ 0.01
TOP3B-202ENST00000398793 OXER1Q8TDS5 423 aa15.12■□□□□ 0.01
TOP3B-202ENST00000398793 SCN7AQ01118 1682 aa15.12■□□□□ 0.01
TOP3B-202ENST00000398793 BTBD18B2RXH4 712 aa15.12■□□□□ 0.01
TOP3B-202ENST00000398793 PFKFB2O60825 505 aa15.12■□□□□ 0.01
TOP3B-202ENST00000398793 CKAP2LQ8IYA6 745 aa15.12■□□□□ 0.01
TOP3B-202ENST00000398793 PNMA1Q8ND90 353 aa15.12■□□□□ 0.01
TOP3B-202ENST00000398793 DDX41Q9UJV9 622 aaKnown RBP15.12■□□□□ 0.01
TOP3B-202ENST00000398793 FANCBQ8NB91 859 aa15.12■□□□□ 0.01
TOP3B-202ENST00000398793 ATP8A2Q9NTI2 1148 aa15.12■□□□□ 0.01
TOP3B-202ENST00000398793 DNAH12Q6ZR08 3092 aa15.11■□□□□ 0.01
TOP3B-202ENST00000398793 PTGER2P43116 358 aa15.11■□□□□ 0.01
TOP3B-202ENST00000398793 TTBK2Q6IQ55 1244 aa15.11■□□□□ 0.01
TOP3B-202ENST00000398793 KCNB2Q92953 911 aa15.11■□□□□ 0.01
TOP3B-202ENST00000398793 RNF181Q9P0P0 153 aa15.11■□□□□ 0.01
TOP3B-202ENST00000398793 GPR75-ASB3A0A0A6YYF3 556 aa15.11■□□□□ 0.01
TOP3B-202ENST00000398793 KIF28PB7ZC32 967 aa15.11■□□□□ 0.01
TOP3B-202ENST00000398793 CTIFO43310 598 aaKnown RBP15.11■□□□□ 0.01
TOP3B-202ENST00000398793 ME1P48163 572 aa15.11■□□□□ 0.01
TOP3B-202ENST00000398793 GMPSP49915 693 aaPredicted RBP15.11■□□□□ 0.01
TOP3B-202ENST00000398793 SEPT2Q15019 361 aa15.11■□□□□ 0.01
TOP3B-202ENST00000398793 EAPPQ56P03 285 aaPredicted RBP15.11■□□□□ 0.01
TOP3B-202ENST00000398793 HEATR3Q7Z4Q2 680 aa15.11■□□□□ 0.01
TOP3B-202ENST00000398793 STAG1Q8WVM7 1258 aa15.11■□□□□ 0.01
TOP3B-202ENST00000398793 ADCY5O95622 1261 aa15.1■□□□□ 0.01
TOP3B-202ENST00000398793 SSRP1Q08945 709 aaKnown RBP15.1■□□□□ 0.01
TOP3B-202ENST00000398793 CPLX2Q6PUV4 134 aaKnown RBP15.1■□□□□ 0.01
TOP3B-202ENST00000398793 MICALL2Q8IY33 904 aa15.1■□□□□ 0.01
TOP3B-202ENST00000398793 CTCFLQ8NI51 663 aaPredicted RBP15.1■□□□□ 0.01
TOP3B-202ENST00000398793 TSPYL1Q9H0U9 437 aa15.1■□□□□ 0.01
TOP3B-202ENST00000398793 LAMB2P55268 1798 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms