RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 IRF2BP1Q8IU81 584 aa4.84□□□□□ -1.63
CD47-203ENST00000398258 DACT3Q96B18 629 aaPredicted RBP4.84□□□□□ -1.63
CD47-203ENST00000398258 CCDC120Q96HB5 630 aa4.84□□□□□ -1.63
CD47-203ENST00000398258 TUT1Q9H6E5 874 aaKnown RBP4.84□□□□□ -1.63
CD47-203ENST00000398258 ZNF552Q9H707 407 aaPredicted RBP4.84□□□□□ -1.63
CD47-203ENST00000398258 ICMTO60725 284 aa4.83□□□□□ -1.64
CD47-203ENST00000398258 ARHGAP4P98171 946 aa4.83□□□□□ -1.64
CD47-203ENST00000398258 ZXDCQ2QGD7 858 aaPredicted RBP4.83□□□□□ -1.64
CD47-203ENST00000398258 GAB4Q2WGN9 574 aa4.83□□□□□ -1.64
CD47-203ENST00000398258 DNAJC14Q6Y2X3 702 aaPredicted RBP4.83□□□□□ -1.64
CD47-203ENST00000398258 SHISA4Q96DD7 197 aa4.83□□□□□ -1.64
CD47-203ENST00000398258 INTS4Q96HW7 963 aaKnown RBP4.83□□□□□ -1.64
CD47-203ENST00000398258 Q96M66 194 aa4.83□□□□□ -1.64
CD47-203ENST00000398258 CBX8Q9HC52 389 aa4.83□□□□□ -1.64
CD47-203ENST00000398258 TRAK1Q9UPV9 953 aa4.83□□□□□ -1.64
CD47-203ENST00000398258 SLC22A31A6NKX4 558 aa4.82□□□□□ -1.64
CD47-203ENST00000398258 ENC1O14682 589 aa4.82□□□□□ -1.64
CD47-203ENST00000398258 INSRRP14616 1297 aa4.82□□□□□ -1.64
CD47-203ENST00000398258 ERCC3P19447 782 aa4.82□□□□□ -1.64
CD47-203ENST00000398258 CDK8P49336 464 aa4.82□□□□□ -1.64
CD47-203ENST00000398258 EPHB3P54753 998 aa4.82□□□□□ -1.64
CD47-203ENST00000398258 ZNF385BQ569K4 471 aa4.82□□□□□ -1.64
CD47-203ENST00000398258 LETMD1Q6P1Q0 360 aa4.82□□□□□ -1.64
CD47-203ENST00000398258 LRFN4Q6PJG9 635 aa4.82□□□□□ -1.64
CD47-203ENST00000398258 CDC37L1Q7L3B6 337 aa4.82□□□□□ -1.64
CD47-203ENST00000398258 CREG2Q8IUH2 290 aa4.82□□□□□ -1.64
CD47-203ENST00000398258 GLYCTKQ8IVS8 523 aa4.82□□□□□ -1.64
CD47-203ENST00000398258 NECAB3Q96P71 396 aaPredicted RBP4.82□□□□□ -1.64
CD47-203ENST00000398258 NIF3L1Q9GZT8 377 aa4.82□□□□□ -1.64
CD47-203ENST00000398258 DUSP15Q9H1R2 295 aaPredicted RBP4.82□□□□□ -1.64
CD47-203ENST00000398258 PICK1Q9NRD5 415 aa4.82□□□□□ -1.64
CD47-203ENST00000398258 YBX2Q9Y2T7 364 aaKnown RBP4.82□□□□□ -1.64
CD47-203ENST00000398258 AKAP8O43823 692 aaKnown RBP4.81□□□□□ -1.64
CD47-203ENST00000398258 C3orf58Q8NDZ4 430 aa4.81□□□□□ -1.64
CD47-203ENST00000398258 XAGE3Q8WTP9 111 aa4.81□□□□□ -1.64
CD47-203ENST00000398258 SLC6A17Q9H1V8 727 aa4.81□□□□□ -1.64
CD47-203ENST00000398258 MBD1Q9UIS9 605 aaPredicted RBP4.81□□□□□ -1.64
CD47-203ENST00000398258 BRPF3Q9ULD4 1205 aa4.81□□□□□ -1.64
CD47-203ENST00000398258 NOTOA8MTQ0 251 aa4.8□□□□□ -1.64
CD47-203ENST00000398258 TRIM37O94972 964 aa4.8□□□□□ -1.64
CD47-203ENST00000398258 HNRNPUQ00839 825 aaKnown RBP eCLIP4.8□□□□□ -1.64
CD47-203ENST00000398258 PUM1Q14671 1186 aaKnown RBP eCLIP4.8□□□□□ -1.64
CD47-203ENST00000398258 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.8□□□□□ -1.64
CD47-203ENST00000398258 TMPRSS7Q7RTY8 843 aa4.8□□□□□ -1.64
CD47-203ENST00000398258 PDZD8Q8NEN9 1154 aa4.8□□□□□ -1.64
CD47-203ENST00000398258 ZNF507Q8TCN5 953 aa4.8□□□□□ -1.64
CD47-203ENST00000398258 BORCS6Q96GS4 357 aa4.8□□□□□ -1.64
CD47-203ENST00000398258 EMILIN2Q9BXX0 1053 aa4.8□□□□□ -1.64
CD47-203ENST00000398258 BCO2Q9BYV7 579 aa4.8□□□□□ -1.64
CD47-203ENST00000398258 PCDHA4Q9UN74 947 aa4.8□□□□□ -1.64
CD47-203ENST00000398258 AKAP2Q9Y2D5 859 aa4.8□□□□□ -1.64
CD47-203ENST00000398258 PRAMEF27A3QJZ7 478 aa4.79□□□□□ -1.64
CD47-203ENST00000398258 SASH1O94885 1247 aa4.79□□□□□ -1.64
CD47-203ENST00000398258 CAP2P40123 477 aa4.79□□□□□ -1.64
CD47-203ENST00000398258 PRAMEF13Q5VWM6 474 aa4.79□□□□□ -1.64
CD47-203ENST00000398258 CDH24Q86UP0 819 aa4.79□□□□□ -1.64
CD47-203ENST00000398258 KCT2Q8NC54 265 aa4.79□□□□□ -1.64
CD47-203ENST00000398258 PLPPR2Q96GM1 343 aa4.79□□□□□ -1.64
CD47-203ENST00000398258 PRICKLE3O43900 615 aaPredicted RBP4.78□□□□□ -1.64
CD47-203ENST00000398258 FBXO24O75426 580 aa4.78□□□□□ -1.64
CD47-203ENST00000398258 NEFLP07196 543 aa4.78□□□□□ -1.64
CD47-203ENST00000398258 TPP2P29144 1249 aaPredicted RBP4.78□□□□□ -1.64
CD47-203ENST00000398258 AFF3P51826 1226 aaKnown RBP4.78□□□□□ -1.64
CD47-203ENST00000398258 TMEM132EQ6IEE7 984 aa4.78□□□□□ -1.64
CD47-203ENST00000398258 NXPE4Q6UWF7 544 aa4.78□□□□□ -1.64
CD47-203ENST00000398258 TPTE2Q6XPS3 522 aa4.78□□□□□ -1.64
CD47-203ENST00000398258 TMEFF1Q8IYR6 380 aa4.78□□□□□ -1.64
CD47-203ENST00000398258 BIN2Q9UBW5 565 aaPredicted RBP4.78□□□□□ -1.64
CD47-203ENST00000398258 RFXAPO00287 272 aa4.77□□□□□ -1.65
CD47-203ENST00000398258 PDE6BP35913 854 aa4.77□□□□□ -1.65
CD47-203ENST00000398258 EGR3Q06889 387 aa4.77□□□□□ -1.65
CD47-203ENST00000398258 NR0B2Q15466 257 aa4.77□□□□□ -1.65
CD47-203ENST00000398258 NPM2Q86SE8 214 aaKnown RBP4.77□□□□□ -1.65
CD47-203ENST00000398258 TMEM151BQ8IW70 566 aa4.77□□□□□ -1.65
CD47-203ENST00000398258 LILRA2Q8N149 483 aa4.77□□□□□ -1.65
CD47-203ENST00000398258 MFSD2AQ8NA29 543 aa4.77□□□□□ -1.65
CD47-203ENST00000398258 TP53I13Q8NBR0 393 aaPredicted RBP4.77□□□□□ -1.65
CD47-203ENST00000398258 SIGLEC10Q96LC7 697 aa4.77□□□□□ -1.65
CD47-203ENST00000398258 WNT10AQ9GZT5 417 aa4.77□□□□□ -1.65
CD47-203ENST00000398258 CWC22Q9HCG8 908 aaKnown RBP4.77□□□□□ -1.65
CD47-203ENST00000398258 RBM47A0AV96 593 aaKnown RBP4.76□□□□□ -1.65
CD47-203ENST00000398258 CST3P01034 146 aaPredicted RBP4.76□□□□□ -1.65
CD47-203ENST00000398258 KIR3DL1P43629 444 aa4.76□□□□□ -1.65
CD47-203ENST00000398258 SPATS1Q496A3 300 aa4.76□□□□□ -1.65
CD47-203ENST00000398258 LLGL2Q6P1M3 1020 aa4.76□□□□□ -1.65
CD47-203ENST00000398258 HHIPL2Q6UWX4 724 aa4.76□□□□□ -1.65
CD47-203ENST00000398258 GAL3ST3Q96A11 431 aa4.76□□□□□ -1.65
CD47-203ENST00000398258 ELMO3Q96BJ8 720 aa4.76□□□□□ -1.65
CD47-203ENST00000398258 TEPSINQ96N21 525 aa4.76□□□□□ -1.65
CD47-203ENST00000398258 ASB16Q96NS5 453 aa4.76□□□□□ -1.65
CD47-203ENST00000398258 CITED4Q96RK1 184 aa4.76□□□□□ -1.65
CD47-203ENST00000398258 DPH2Q9BQC3 489 aaPredicted RBP4.76□□□□□ -1.65
CD47-203ENST00000398258 BDH2Q9BUT1 245 aa4.76□□□□□ -1.65
CD47-203ENST00000398258 CNTD2Q9H8S5 307 aa4.76□□□□□ -1.65
CD47-203ENST00000398258 DCTN4Q9UJW0 460 aa4.76□□□□□ -1.65
CD47-203ENST00000398258 PCDHA11Q9Y5I1 949 aa4.76□□□□□ -1.65
CD47-203ENST00000398258 IRS4O14654 1257 aaPredicted RBP4.75□□□□□ -1.65
CD47-203ENST00000398258 NDUFB5O43674 189 aa4.75□□□□□ -1.65
CD47-203ENST00000398258 XRCC5P13010 732 aaKnown RBP4.75□□□□□ -1.65
CD47-203ENST00000398258 SIRT2Q8IXJ6 389 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms