RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 CABP5Q9NP86 173 aa20.01■□□□□ 0.79
APTR-201ENST00000398043 PTPN22Q9Y2R2 807 aa20.01■□□□□ 0.79
APTR-201ENST00000398043 PLXNB2O15031 1838 aa20.01■□□□□ 0.79
APTR-201ENST00000398043 CENPFP49454 3210 aa20.01■□□□□ 0.79
APTR-201ENST00000398043 RBBP6Q7Z6E9 1792 aaKnown RBP20■□□□□ 0.79
APTR-201ENST00000398043 KIAA0100Q14667 2235 aaKnown RBP20■□□□□ 0.79
APTR-201ENST00000398043 AKR1B1P15121 316 aa20■□□□□ 0.79
APTR-201ENST00000398043 USP17L2Q6R6M4 530 aa20■□□□□ 0.79
APTR-201ENST00000398043 CCDC129Q6ZRS4 1044 aa20■□□□□ 0.79
APTR-201ENST00000398043 TMEM179Q6ZVK1 233 aa20■□□□□ 0.79
APTR-201ENST00000398043 AMOTL1Q8IY63 956 aa20■□□□□ 0.79
APTR-201ENST00000398043 CCDC17Q96LX7 622 aa20■□□□□ 0.79
APTR-201ENST00000398043 FAM227BQ96M60 508 aa20■□□□□ 0.79
APTR-201ENST00000398043 HELLSQ9NRZ9 838 aa20■□□□□ 0.79
APTR-201ENST00000398043 A0A0D9SFI3 127 aa19.99■□□□□ 0.79
APTR-201ENST00000398043 A0A1W2PRG0 241 aa19.99■□□□□ 0.79
APTR-201ENST00000398043 TMOD4Q9NZQ9 345 aa19.99■□□□□ 0.79
APTR-201ENST00000398043 PNMA3Q9UL41 463 aa19.99■□□□□ 0.79
APTR-201ENST00000398043 PABPC4Q13310 644 aaKnown RBP eCLIP19.98■□□□□ 0.79
APTR-201ENST00000398043 POTEEQ6S8J3 1075 aa19.98■□□□□ 0.79
APTR-201ENST00000398043 TRIM47Q96LD4 638 aa19.98■□□□□ 0.79
APTR-201ENST00000398043 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.98■□□□□ 0.79
APTR-201ENST00000398043 LAMA4Q16363 1823 aa19.97■□□□□ 0.79
APTR-201ENST00000398043 CCDC85CA6NKD9 419 aa19.97■□□□□ 0.79
APTR-201ENST00000398043 MPHOSPH10O00566 681 aaKnown RBP19.97■□□□□ 0.79
APTR-201ENST00000398043 GNRH1P01148 92 aa19.97■□□□□ 0.79
APTR-201ENST00000398043 RASA1P20936 1047 aa19.97■□□□□ 0.79
APTR-201ENST00000398043 OSBPP22059 807 aa19.97■□□□□ 0.79
APTR-201ENST00000398043 VPS53Q5VIR6 699 aa19.97■□□□□ 0.79
APTR-201ENST00000398043 CLEC10AQ8IUN9 316 aa19.97■□□□□ 0.79
APTR-201ENST00000398043 SMCR8Q8TEV9 937 aaPredicted RBP19.97■□□□□ 0.79
APTR-201ENST00000398043 COL11A1P12107 1806 aaPredicted RBP19.97■□□□□ 0.79
APTR-201ENST00000398043 A0A0G2JMZ2 1700 aa19.96■□□□□ 0.79
APTR-201ENST00000398043 MINDY4BA8MYZ0 360 aa19.96■□□□□ 0.79
APTR-201ENST00000398043 TRIM6-TRIM34B2RNG4 842 aa19.96■□□□□ 0.79
APTR-201ENST00000398043 APPP05067 770 aa19.96■□□□□ 0.79
APTR-201ENST00000398043 SDSP20132 328 aa19.96■□□□□ 0.79
APTR-201ENST00000398043 PSMC4P43686 418 aa19.96■□□□□ 0.79
APTR-201ENST00000398043 GCLCP48506 637 aaPredicted RBP19.96■□□□□ 0.79
APTR-201ENST00000398043 TDO2P48775 406 aa19.96■□□□□ 0.79
APTR-201ENST00000398043 USP14P54578 494 aa19.96■□□□□ 0.79
APTR-201ENST00000398043 NMIQ13287 307 aaPredicted RBP19.96■□□□□ 0.79
APTR-201ENST00000398043 KIF22Q14807 665 aa19.96■□□□□ 0.79
APTR-201ENST00000398043 ARHGEF6Q15052 776 aa19.96■□□□□ 0.79
APTR-201ENST00000398043 FAM110CQ1W6H9 321 aa19.96■□□□□ 0.79
APTR-201ENST00000398043 MCMDC2Q4G0Z9 681 aa19.96■□□□□ 0.79
APTR-201ENST00000398043 ANKRD13CQ8N6S4 541 aa19.96■□□□□ 0.79
APTR-201ENST00000398043 RILPL2Q969X0 211 aa19.96■□□□□ 0.79
APTR-201ENST00000398043 P2RX7Q99572 595 aaKnown RBP19.96■□□□□ 0.79
APTR-201ENST00000398043 VCAM1P19320 739 aa19.95■□□□□ 0.78
APTR-201ENST00000398043 ALX1Q15699 326 aa19.95■□□□□ 0.78
APTR-201ENST00000398043 ZYXQ15942 572 aaKnown RBP19.95■□□□□ 0.78
APTR-201ENST00000398043 KIAA1755Q5JYT7 1200 aa19.95■□□□□ 0.78
APTR-201ENST00000398043 ZNF589Q86UQ0 364 aaPredicted RBP19.95■□□□□ 0.78
APTR-201ENST00000398043 FEZ1Q99689 392 aa19.95■□□□□ 0.78
APTR-201ENST00000398043 NACAP1Q9BZK3 213 aa19.95■□□□□ 0.78
APTR-201ENST00000398043 MORF4L1Q9UBU8 362 aa19.95■□□□□ 0.78
APTR-201ENST00000398043 GSPT1P15170 499 aaKnown RBP19.94■□□□□ 0.78
APTR-201ENST00000398043 HERVK_113P62684 666 aa19.94■□□□□ 0.78
APTR-201ENST00000398043 CATSPERGQ6ZRH7 1159 aa19.94■□□□□ 0.78
APTR-201ENST00000398043 NAPBQ9H115 298 aa19.94■□□□□ 0.78
APTR-201ENST00000398043 TMX2Q9Y320 296 aa19.94■□□□□ 0.78
APTR-201ENST00000398043 PTCH2Q9Y6C5 1203 aa19.94■□□□□ 0.78
APTR-201ENST00000398043 IGKV6D-41A0A0C4DH26 115 aa19.93■□□□□ 0.78
APTR-201ENST00000398043 PRMT2P55345 433 aa19.93■□□□□ 0.78
APTR-201ENST00000398043 IRX3P78415 501 aaPredicted RBP19.93■□□□□ 0.78
APTR-201ENST00000398043 ICA1Q05084 483 aa19.93■□□□□ 0.78
APTR-201ENST00000398043 PPARAQ07869 468 aa19.93■□□□□ 0.78
APTR-201ENST00000398043 TTC22Q5TAA0 569 aa19.93■□□□□ 0.78
APTR-201ENST00000398043 ARMC5Q96C12 935 aa19.93■□□□□ 0.78
APTR-201ENST00000398043 KANSL2Q9H9L4 492 aa19.93■□□□□ 0.78
APTR-201ENST00000398043 TXNRD2Q9NNW7 524 aa19.93■□□□□ 0.78
APTR-201ENST00000398043 SRRDQ9UH36 339 aa19.93■□□□□ 0.78
APTR-201ENST00000398043 TACC3Q9Y6A5 838 aa19.93■□□□□ 0.78
APTR-201ENST00000398043 ZNFX1Q9P2E3 1918 aaKnown RBP19.93■□□□□ 0.78
APTR-201ENST00000398043 USP17L15C9J2P7 530 aa19.92■□□□□ 0.78
APTR-201ENST00000398043 USP17L13C9JLJ4 530 aa19.92■□□□□ 0.78
APTR-201ENST00000398043 USP17L11C9JVI0 530 aa19.92■□□□□ 0.78
APTR-201ENST00000398043 USP17L18D6R9N7 530 aa19.92■□□□□ 0.78
APTR-201ENST00000398043 USP17L22D6RA61 530 aa19.92■□□□□ 0.78
APTR-201ENST00000398043 USP17L17D6RBQ6 530 aa19.92■□□□□ 0.78
APTR-201ENST00000398043 USP17L19D6RCP7 530 aa19.92■□□□□ 0.78
APTR-201ENST00000398043 USP17L20D6RJB6 530 aa19.92■□□□□ 0.78
APTR-201ENST00000398043 RGS19P49795 217 aa19.92■□□□□ 0.78
APTR-201ENST00000398043 FCGRTP55899 365 aa19.92■□□□□ 0.78
APTR-201ENST00000398043 USP17L24Q0WX57 530 aa19.92■□□□□ 0.78
APTR-201ENST00000398043 STK11IPQ8N1F8 1099 aa19.92■□□□□ 0.78
APTR-201ENST00000398043 RBPJLQ9UBG7 517 aa19.92■□□□□ 0.78
APTR-201ENST00000398043 ANAPC4Q9UJX5 808 aa19.92■□□□□ 0.78
APTR-201ENST00000398043 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.92■□□□□ 0.78
APTR-201ENST00000398043 CCDC171Q6TFL3 1326 aa19.92■□□□□ 0.78
APTR-201ENST00000398043 PEX10O60683 326 aa19.91■□□□□ 0.78
APTR-201ENST00000398043 ECM2O94769 699 aaPredicted RBP19.91■□□□□ 0.78
APTR-201ENST00000398043 HSPD1P10809 573 aaKnown RBP19.91■□□□□ 0.78
APTR-201ENST00000398043 EEF2P13639 858 aaKnown RBP19.91■□□□□ 0.78
APTR-201ENST00000398043 LBX2Q6XYB7 198 aa19.91■□□□□ 0.78
APTR-201ENST00000398043 VCPKMTQ9H867 229 aa19.91■□□□□ 0.78
APTR-201ENST00000398043 ARHGEF10LQ9HCE6 1279 aa19.91■□□□□ 0.78
APTR-201ENST00000398043 ZMYM6O95789 1325 aa19.91■□□□□ 0.78
APTR-201ENST00000398043 PLIN4Q96Q06 1357 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms