RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 FOCADQ5VW36 1801 aa22.4■■□□□ 1.18
COLCA2-201ENST00000398035 ROBO3Q96MS0 1386 aa22.4■■□□□ 1.18
COLCA2-201ENST00000398035 AKR1B1P15121 316 aa22.4■■□□□ 1.18
COLCA2-201ENST00000398035 GCLCP48506 637 aaPredicted RBP22.4■■□□□ 1.18
COLCA2-201ENST00000398035 PPARAQ07869 468 aa22.4■■□□□ 1.18
COLCA2-201ENST00000398035 EFCC1Q9HA90 598 aa22.4■■□□□ 1.18
COLCA2-201ENST00000398035 EMILIN3Q9NT22 766 aa22.4■■□□□ 1.18
COLCA2-201ENST00000398035 CPA4Q9UI42 421 aa22.4■■□□□ 1.18
COLCA2-201ENST00000398035 CCDC171Q6TFL3 1326 aa22.39■■□□□ 1.18
COLCA2-201ENST00000398035 HSPD1P10809 573 aaKnown RBP22.39■■□□□ 1.17
COLCA2-201ENST00000398035 IRX3P78415 501 aaPredicted RBP22.39■■□□□ 1.17
COLCA2-201ENST00000398035 ERICH6BQ5W0A0 696 aa22.39■■□□□ 1.17
COLCA2-201ENST00000398035 CWC27Q6UX04 472 aaKnown RBP22.39■■□□□ 1.17
COLCA2-201ENST00000398035 LACTBP83111 547 aaPredicted RBP22.38■■□□□ 1.17
COLCA2-201ENST00000398035 ICA1Q05084 483 aa22.38■■□□□ 1.17
COLCA2-201ENST00000398035 IFFO2Q5TF58 517 aa22.38■■□□□ 1.17
COLCA2-201ENST00000398035 CD99L2Q8TCZ2 262 aa22.38■■□□□ 1.17
COLCA2-201ENST00000398035 GTF3C2Q8WUA4 911 aaPredicted RBP22.38■■□□□ 1.17
COLCA2-201ENST00000398035 RUFY2Q8WXA3 655 aa22.38■■□□□ 1.17
COLCA2-201ENST00000398035 ASCC2Q9H1I8 757 aaPredicted RBP22.38■■□□□ 1.17
COLCA2-201ENST00000398035 ANAPC4Q9UJX5 808 aa22.38■■□□□ 1.17
COLCA2-201ENST00000398035 TRIM17Q9Y577 477 aa22.38■■□□□ 1.17
COLCA2-201ENST00000398035 LAMB1P07942 1786 aa22.37■■□□□ 1.17
COLCA2-201ENST00000398035 DOCK1Q14185 1865 aa22.37■■□□□ 1.17
COLCA2-201ENST00000398035 USP17L15C9J2P7 530 aa22.37■■□□□ 1.17
COLCA2-201ENST00000398035 USP17L13C9JLJ4 530 aa22.37■■□□□ 1.17
COLCA2-201ENST00000398035 USP17L11C9JVI0 530 aa22.37■■□□□ 1.17
COLCA2-201ENST00000398035 USP17L18D6R9N7 530 aa22.37■■□□□ 1.17
COLCA2-201ENST00000398035 USP17L22D6RA61 530 aa22.37■■□□□ 1.17
COLCA2-201ENST00000398035 USP17L17D6RBQ6 530 aa22.37■■□□□ 1.17
COLCA2-201ENST00000398035 USP17L19D6RCP7 530 aa22.37■■□□□ 1.17
COLCA2-201ENST00000398035 USP17L20D6RJB6 530 aa22.37■■□□□ 1.17
COLCA2-201ENST00000398035 SMIM22K7EJ46 135 aa22.37■■□□□ 1.17
COLCA2-201ENST00000398035 FGAP02671 866 aa22.37■■□□□ 1.17
COLCA2-201ENST00000398035 BCRP11274 1271 aa22.37■■□□□ 1.17
COLCA2-201ENST00000398035 GSPT1P15170 499 aaKnown RBP22.37■■□□□ 1.17
COLCA2-201ENST00000398035 RASA1P20936 1047 aa22.37■■□□□ 1.17
COLCA2-201ENST00000398035 HOXD10P28358 340 aa22.37■■□□□ 1.17
COLCA2-201ENST00000398035 USP17L24Q0WX57 530 aa22.37■■□□□ 1.17
COLCA2-201ENST00000398035 VPS53Q5VIR6 699 aa22.37■■□□□ 1.17
COLCA2-201ENST00000398035 FBXO46Q6PJ61 603 aaPredicted RBP22.37■■□□□ 1.17
COLCA2-201ENST00000398035 ACER1Q8TDN7 264 aa22.37■■□□□ 1.17
COLCA2-201ENST00000398035 TMX2Q9Y320 296 aa22.37■■□□□ 1.17
COLCA2-201ENST00000398035 ZMYM6O95789 1325 aa22.37■■□□□ 1.17
COLCA2-201ENST00000398035 ADGRA2Q96PE1 1338 aa22.37■■□□□ 1.17
COLCA2-201ENST00000398035 PPP4R3BQ5MIZ7 849 aa22.36■■□□□ 1.17
COLCA2-201ENST00000398035 OTOP1Q7RTM1 612 aa22.36■■□□□ 1.17
COLCA2-201ENST00000398035 LPAR1Q92633 364 aa22.36■■□□□ 1.17
COLCA2-201ENST00000398035 ABHD8Q96I13 439 aa22.36■■□□□ 1.17
COLCA2-201ENST00000398035 MYH1P12882 1939 aa22.35■■□□□ 1.17
COLCA2-201ENST00000398035 CDK5RAP2Q96SN8 1893 aa22.35■■□□□ 1.17
COLCA2-201ENST00000398035 SIPA1L1O43166 1804 aa22.35■■□□□ 1.17
COLCA2-201ENST00000398035 FOXP2O15409 715 aa22.35■■□□□ 1.17
COLCA2-201ENST00000398035 PRMT2P55345 433 aa22.35■■□□□ 1.17
COLCA2-201ENST00000398035 ZNF589Q86UQ0 364 aaPredicted RBP22.35■■□□□ 1.17
COLCA2-201ENST00000398035 STK11IPQ8N1F8 1099 aa22.35■■□□□ 1.17
COLCA2-201ENST00000398035 PCP11498 1178 aaKnown RBP22.34■■□□□ 1.17
COLCA2-201ENST00000398035 ZYXQ15942 572 aaKnown RBP22.34■■□□□ 1.17
COLCA2-201ENST00000398035 FAM110CQ1W6H9 321 aa22.34■■□□□ 1.17
COLCA2-201ENST00000398035 NYAP2Q9P242 653 aa22.34■■□□□ 1.17
COLCA2-201ENST00000398035 DDX60LQ5H9U9 1706 aaKnown RBP22.33■■□□□ 1.17
COLCA2-201ENST00000398035 A0A1W2PRG0 241 aa22.33■■□□□ 1.17
COLCA2-201ENST00000398035 TSPY3P0CV98 308 aa22.33■■□□□ 1.17
COLCA2-201ENST00000398035 TSPY8P0CW00 308 aa22.33■■□□□ 1.17
COLCA2-201ENST00000398035 EEF2P13639 858 aaKnown RBP22.33■■□□□ 1.17
COLCA2-201ENST00000398035 VCAM1P19320 739 aa22.33■■□□□ 1.17
COLCA2-201ENST00000398035 NT5C2P49902 561 aa22.33■■□□□ 1.17
COLCA2-201ENST00000398035 CATSPERGQ6ZRH7 1159 aa22.33■■□□□ 1.17
COLCA2-201ENST00000398035 SIAH1Q8IUQ4 282 aa22.33■■□□□ 1.17
COLCA2-201ENST00000398035 P2RX7Q99572 595 aaKnown RBP22.33■■□□□ 1.17
COLCA2-201ENST00000398035 DSCC1Q9BVC3 393 aa22.33■■□□□ 1.17
COLCA2-201ENST00000398035 HOXC10Q9NYD6 342 aa22.33■■□□□ 1.17
COLCA2-201ENST00000398035 CTNNA3Q9UI47 895 aa22.33■■□□□ 1.17
COLCA2-201ENST00000398035 SYNPO2Q9UMS6 1093 aa22.33■■□□□ 1.17
COLCA2-201ENST00000398035 PTPN22Q9Y2R2 807 aa22.33■■□□□ 1.17
COLCA2-201ENST00000398035 PRDM1O75626 825 aa22.32■■□□□ 1.16
COLCA2-201ENST00000398035 FMNL1O95466 1100 aaPredicted RBP22.32■■□□□ 1.16
COLCA2-201ENST00000398035 FGRP09769 529 aa22.32■■□□□ 1.16
COLCA2-201ENST00000398035 PSMC4P43686 418 aa22.32■■□□□ 1.16
COLCA2-201ENST00000398035 FCGRTP55899 365 aa22.32■■□□□ 1.16
COLCA2-201ENST00000398035 NEDD1Q8NHV4 660 aa22.32■■□□□ 1.16
COLCA2-201ENST00000398035 GOPCQ9HD26 462 aa22.32■■□□□ 1.16
COLCA2-201ENST00000398035 MYH7P12883 1935 aa22.32■■□□□ 1.16
COLCA2-201ENST00000398035 RAD50Q92878 1312 aa22.32■■□□□ 1.16
COLCA2-201ENST00000398035 HERVK_113P62684 666 aa22.31■■□□□ 1.16
COLCA2-201ENST00000398035 ATP2B2Q01814 1243 aa22.31■■□□□ 1.16
COLCA2-201ENST00000398035 ANKRD13CQ8N6S4 541 aa22.31■■□□□ 1.16
COLCA2-201ENST00000398035 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.31■■□□□ 1.16
COLCA2-201ENST00000398035 RNF41Q9H4P4 317 aaPredicted RBP22.31■■□□□ 1.16
COLCA2-201ENST00000398035 VCPKMTQ9H867 229 aa22.31■■□□□ 1.16
COLCA2-201ENST00000398035 NAV1Q8NEY1 1877 aa22.31■■□□□ 1.16
COLCA2-201ENST00000398035 ZNF213O14771 459 aa22.31■■□□□ 1.16
COLCA2-201ENST00000398035 CHMLP26374 656 aa22.31■■□□□ 1.16
COLCA2-201ENST00000398035 TFAP4Q01664 338 aa22.31■■□□□ 1.16
COLCA2-201ENST00000398035 COG2Q14746 738 aa22.31■■□□□ 1.16
COLCA2-201ENST00000398035 RPAP3Q9H6T3 665 aaPredicted RBP22.31■■□□□ 1.16
COLCA2-201ENST00000398035 MORF4L1Q9UBU8 362 aa22.31■■□□□ 1.16
COLCA2-201ENST00000398035 ORC4O43929 436 aa22.3■■□□□ 1.16
COLCA2-201ENST00000398035 TTLL1O95922 423 aa22.3■■□□□ 1.16
COLCA2-201ENST00000398035 CTDSPL2Q05D32 466 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms