RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 SPATA5Q8NB90 893 aa12.51□□□□□ -0.41
CSGALNACT1-202ENST00000397998 OR8K1Q8NGG5 319 aa12.51□□□□□ -0.41
CSGALNACT1-202ENST00000397998 RTL9Q8NET4 1388 aa12.51□□□□□ -0.41
CSGALNACT1-202ENST00000397998 KCNJ18B7U540 433 aa12.51□□□□□ -0.41
CSGALNACT1-202ENST00000397998 MMP1P03956 469 aa12.51□□□□□ -0.41
CSGALNACT1-202ENST00000397998 ADD2P35612 726 aa12.51□□□□□ -0.41
CSGALNACT1-202ENST00000397998 PDE4BQ07343 736 aa12.51□□□□□ -0.41
CSGALNACT1-202ENST00000397998 TRIM14Q14142 442 aa12.51□□□□□ -0.41
CSGALNACT1-202ENST00000397998 MORC3Q14149 939 aa12.51□□□□□ -0.41
CSGALNACT1-202ENST00000397998 KCNJ12Q14500 433 aa12.51□□□□□ -0.41
CSGALNACT1-202ENST00000397998 PDIA6Q15084 440 aa12.51□□□□□ -0.41
CSGALNACT1-202ENST00000397998 FAM114A1Q8IWE2 563 aa12.51□□□□□ -0.41
CSGALNACT1-202ENST00000397998 ATRIPQ8WXE1 791 aa12.51□□□□□ -0.41
CSGALNACT1-202ENST00000397998 IFT81Q8WYA0 676 aa12.51□□□□□ -0.41
CSGALNACT1-202ENST00000397998 GREM2Q9H772 168 aa12.51□□□□□ -0.41
CSGALNACT1-202ENST00000397998 ZNF446Q9NWS9 450 aa12.51□□□□□ -0.41
CSGALNACT1-202ENST00000397998 GOLGA6BA6NDN3 693 aa12.5□□□□□ -0.41
CSGALNACT1-202ENST00000397998 ATP2B2Q01814 1243 aa12.5□□□□□ -0.41
CSGALNACT1-202ENST00000397998 PUM3Q15397 648 aaKnown RBP12.5□□□□□ -0.41
CSGALNACT1-202ENST00000397998 DTHD1Q6ZMT9 781 aa12.5□□□□□ -0.41
CSGALNACT1-202ENST00000397998 HEATR3Q7Z4Q2 680 aa12.5□□□□□ -0.41
CSGALNACT1-202ENST00000397998 REXO1L1PQ8IX06 675 aa12.5□□□□□ -0.41
CSGALNACT1-202ENST00000397998 CCDC51Q96ER9 411 aa12.5□□□□□ -0.41
CSGALNACT1-202ENST00000397998 OPA1O60313 960 aa12.5□□□□□ -0.41
CSGALNACT1-202ENST00000397998 CIAO1O76071 339 aa12.5□□□□□ -0.41
CSGALNACT1-202ENST00000397998 IRX3P78415 501 aaPredicted RBP12.5□□□□□ -0.41
CSGALNACT1-202ENST00000397998 ARID5AQ03989 594 aa12.5□□□□□ -0.41
CSGALNACT1-202ENST00000397998 FMR1Q06787 632 aaKnown RBP eCLIP12.5□□□□□ -0.41
CSGALNACT1-202ENST00000397998 RABL6Q3YEC7 729 aaPredicted RBP12.5□□□□□ -0.41
CSGALNACT1-202ENST00000397998 CSGALNACT2Q8N6G5 542 aa12.5□□□□□ -0.41
CSGALNACT1-202ENST00000397998 SDR42E1Q8WUS8 393 aa12.5□□□□□ -0.41
CSGALNACT1-202ENST00000397998 FERMT2Q96AC1 680 aa12.5□□□□□ -0.41
CSGALNACT1-202ENST00000397998 MKRN1Q9UHC7 482 aaKnown RBP12.5□□□□□ -0.41
CSGALNACT1-202ENST00000397998 PRKAB2O43741 272 aa12.5□□□□□ -0.41
CSGALNACT1-202ENST00000397998 CDC25AP30304 524 aa12.5□□□□□ -0.41
CSGALNACT1-202ENST00000397998 FAM71BQ8TC56 605 aa12.5□□□□□ -0.41
CSGALNACT1-202ENST00000397998 BMP2KQ9NSY1 1161 aaPredicted RBP12.5□□□□□ -0.41
CSGALNACT1-202ENST00000397998 ATP2C2O75185 946 aa12.49□□□□□ -0.41
CSGALNACT1-202ENST00000397998 FMNL1O95466 1100 aaPredicted RBP12.49□□□□□ -0.41
CSGALNACT1-202ENST00000397998 IFNAR1P17181 557 aa12.49□□□□□ -0.41
CSGALNACT1-202ENST00000397998 PTPREP23469 700 aa12.49□□□□□ -0.41
CSGALNACT1-202ENST00000397998 MAP3K9P80192 1104 aa12.49□□□□□ -0.41
CSGALNACT1-202ENST00000397998 PTGDRQ13258 359 aa12.49□□□□□ -0.41
CSGALNACT1-202ENST00000397998 NCAPHQ15003 741 aa12.49□□□□□ -0.41
CSGALNACT1-202ENST00000397998 CCDC40Q4G0X9 1142 aa12.49□□□□□ -0.41
CSGALNACT1-202ENST00000397998 TUBE1Q9UJT0 475 aa12.49□□□□□ -0.41
CSGALNACT1-202ENST00000397998 DENND2AQ9ULE3 1009 aa12.49□□□□□ -0.41
CSGALNACT1-202ENST00000397998 ADGRG1Q9Y653 693 aa12.49□□□□□ -0.41
CSGALNACT1-202ENST00000397998 TRIM66O15016 1216 aa12.49□□□□□ -0.41
CSGALNACT1-202ENST00000397998 MCAMP43121 646 aa12.49□□□□□ -0.41
CSGALNACT1-202ENST00000397998 COPB1P53618 953 aaKnown RBP12.49□□□□□ -0.41
CSGALNACT1-202ENST00000397998 RNASE9P60153 205 aaKnown RBP12.49□□□□□ -0.41
CSGALNACT1-202ENST00000397998 ILDR1Q86SU0 546 aaPredicted RBP12.49□□□□□ -0.41
CSGALNACT1-202ENST00000397998 PPM1EQ8WY54 764 aa12.49□□□□□ -0.41
CSGALNACT1-202ENST00000397998 LPIN2Q92539 896 aa12.49□□□□□ -0.41
CSGALNACT1-202ENST00000397998 NOC4LQ9BVI4 516 aaKnown RBP12.49□□□□□ -0.41
CSGALNACT1-202ENST00000397998 MRPL44Q9H9J2 332 aaKnown RBP12.49□□□□□ -0.41
CSGALNACT1-202ENST00000397998 PTPRUQ92729 1446 aa12.49□□□□□ -0.41
CSGALNACT1-202ENST00000397998 ADGRL3Q9HAR2 1447 aa12.49□□□□□ -0.41
CSGALNACT1-202ENST00000397998 RFX7Q2KHR2 1363 aa12.49□□□□□ -0.41
CSGALNACT1-202ENST00000397998 FOXO4P98177 505 aa12.49□□□□□ -0.41
CSGALNACT1-202ENST00000397998 UBE3CQ15386 1083 aa12.49□□□□□ -0.41
CSGALNACT1-202ENST00000397998 DZIP3Q86Y13 1208 aaKnown RBP12.49□□□□□ -0.41
CSGALNACT1-202ENST00000397998 ZNF444Q8N0Y2 327 aaPredicted RBP12.49□□□□□ -0.41
CSGALNACT1-202ENST00000397998 CALML4Q96GE6 196 aa12.49□□□□□ -0.41
CSGALNACT1-202ENST00000397998 FOXP1Q9H334 677 aaPredicted RBP12.49□□□□□ -0.41
CSGALNACT1-202ENST00000397998 TNKSO95271 1327 aa12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 NDUFAB1O14561 156 aa12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 CYP27B1O15528 508 aa12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 RNF40O75150 1001 aa12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 NOP2P46087 812 aaKnown RBP12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 ANTXR2P58335 489 aa12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 AMPD3Q01432 767 aa12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 OTUD6BQ8N6M0 293 aa12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 TC2NQ8N9U0 490 aa12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 PANX2Q96RD6 677 aa12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 PIH1D3Q9NQM4 214 aaKnown RBP12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 PREX1Q8TCU6 1659 aa12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 UTYO14607 1347 aa12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 TMCO5BA8MYB1 307 aa12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 MFAP3LO75121 409 aa12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 TBC1D8O95759 1140 aa12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 IL2RBP14784 551 aa12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 VAV2P52735 878 aa12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 DZIP1Q86YF9 867 aaKnown RBP12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 SYNE4Q8N205 404 aa12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 JAG2Q9Y219 1238 aa12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 ANKARQ7Z5J8 1434 aa12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 SNAP23O00161 211 aa12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 GSDMAQ96QA5 445 aa12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 TSG101Q99816 390 aa12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 SUGCTQ9HAC7 445 aa12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 SENP2Q9HC62 589 aa12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 MED4Q9NPJ6 270 aa12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 SRPRBQ9Y5M8 271 aaKnown RBP12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 PCDH11XQ9BZA7 1347 aa12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 PCDH11YQ9BZA8 1340 aa12.48□□□□□ -0.41
CSGALNACT1-202ENST00000397998 CALM1P0DP23 149 aa12.47□□□□□ -0.41
CSGALNACT1-202ENST00000397998 CALM2P0DP24 149 aa12.47□□□□□ -0.41
CSGALNACT1-202ENST00000397998 CALM3P0DP25 149 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms