RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 KIF13BQ9NQT8 1826 aa6.72□□□□□ -1.33
PTPRD-206ENST00000397617 PLCD1P51178 756 aa6.72□□□□□ -1.33
PTPRD-206ENST00000397617 AGBL3Q8NEM8 1001 aa6.72□□□□□ -1.33
PTPRD-206ENST00000397617 CTAGE1Q96RT6 745 aa6.72□□□□□ -1.33
PTPRD-206ENST00000397617 USP28Q96RU2 1077 aa6.72□□□□□ -1.33
PTPRD-206ENST00000397617 ABCF2Q9UG63 623 aa6.72□□□□□ -1.33
PTPRD-206ENST00000397617 ME1P48163 572 aa6.72□□□□□ -1.33
PTPRD-206ENST00000397617 PDIA5Q14554 519 aa6.72□□□□□ -1.33
PTPRD-206ENST00000397617 ENAHQ8N8S7 591 aaPredicted RBP6.72□□□□□ -1.33
PTPRD-206ENST00000397617 TEKT1Q969V4 418 aa6.72□□□□□ -1.33
PTPRD-206ENST00000397617 SPTLC3Q9NUV7 552 aa6.72□□□□□ -1.33
PTPRD-206ENST00000397617 CASZ1Q86V15 1759 aa6.71□□□□□ -1.33
PTPRD-206ENST00000397617 PKP1Q13835 747 aa6.71□□□□□ -1.33
PTPRD-206ENST00000397617 TUBB2AQ13885 445 aa6.71□□□□□ -1.33
PTPRD-206ENST00000397617 SYCP1Q15431 976 aa6.71□□□□□ -1.33
PTPRD-206ENST00000397617 IFIT1BQ5T764 474 aaKnown RBP6.71□□□□□ -1.33
PTPRD-206ENST00000397617 NUTM2AQ8IVF1 878 aaPredicted RBP6.71□□□□□ -1.33
PTPRD-206ENST00000397617 NOC3LQ8WTT2 800 aaKnown RBP6.71□□□□□ -1.33
PTPRD-206ENST00000397617 TUBB2BQ9BVA1 445 aa6.71□□□□□ -1.33
PTPRD-206ENST00000397617 NBPF3Q9H094 633 aa6.71□□□□□ -1.33
PTPRD-206ENST00000397617 SEC31BQ9NQW1 1179 aa6.71□□□□□ -1.33
PTPRD-206ENST00000397617 TNFAIP1Q13829 316 aa6.71□□□□□ -1.33
PTPRD-206ENST00000397617 XRRA1Q6P2D8 792 aa6.71□□□□□ -1.33
PTPRD-206ENST00000397617 ENOX1Q8TC92 643 aaKnown RBP6.71□□□□□ -1.33
PTPRD-206ENST00000397617 CCDC47Q96A33 483 aaKnown RBP6.71□□□□□ -1.33
PTPRD-206ENST00000397617 STK17AQ9UEE5 414 aa6.71□□□□□ -1.33
PTPRD-206ENST00000397617 ATP2C1P98194 919 aaPredicted RBP6.71□□□□□ -1.34
PTPRD-206ENST00000397617 AP3B2Q13367 1082 aa6.71□□□□□ -1.34
PTPRD-206ENST00000397617 TBC1D10CQ8IV04 446 aa6.71□□□□□ -1.34
PTPRD-206ENST00000397617 RIOX1Q9H6W3 641 aa6.71□□□□□ -1.34
PTPRD-206ENST00000397617 ANKRD31Q8N7Z5 1873 aa6.71□□□□□ -1.34
PTPRD-206ENST00000397617 BCAMP50895 628 aa6.71□□□□□ -1.34
PTPRD-206ENST00000397617 MRPL12P52815 198 aaKnown RBP6.71□□□□□ -1.34
PTPRD-206ENST00000397617 NFXL1Q6ZNB6 911 aa6.71□□□□□ -1.34
PTPRD-206ENST00000397617 ANKRD20A12PQ8NF67 263 aa6.71□□□□□ -1.34
PTPRD-206ENST00000397617 MKNK2Q9HBH9 465 aa6.71□□□□□ -1.34
PTPRD-206ENST00000397617 ZC3H4Q9UPT8 1303 aaKnown RBP6.71□□□□□ -1.34
PTPRD-206ENST00000397617 USP17L12C9JPN9 530 aa6.71□□□□□ -1.34
PTPRD-206ENST00000397617 USP17L21D6R901 530 aa6.71□□□□□ -1.34
PTPRD-206ENST00000397617 BTNL9Q6UXG8 535 aa6.71□□□□□ -1.34
PTPRD-206ENST00000397617 CCDC150Q8NCX0 1101 aa6.71□□□□□ -1.34
PTPRD-206ENST00000397617 TBC1D16Q8TBP0 767 aa6.71□□□□□ -1.34
PTPRD-206ENST00000397617 SEC62Q99442 399 aaKnown RBP6.71□□□□□ -1.34
PTPRD-206ENST00000397617 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.71□□□□□ -1.34
PTPRD-206ENST00000397617 BECN2A8MW95 431 aa6.71□□□□□ -1.34
PTPRD-206ENST00000397617 MSNP26038 577 aaKnown RBP6.71□□□□□ -1.34
PTPRD-206ENST00000397617 MFSD14BQ5SR56 506 aa6.71□□□□□ -1.34
PTPRD-206ENST00000397617 MPNDQ8N594 471 aa6.71□□□□□ -1.34
PTPRD-206ENST00000397617 PIBF1Q8WXW3 757 aa6.71□□□□□ -1.34
PTPRD-206ENST00000397617 TBC1D12O60347 775 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 TXLNBQ8N3L3 684 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 RETREG2Q8NC44 543 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 KCNN1Q92952 543 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.7□□□□□ -1.34
PTPRD-206ENST00000397617 LARGE1O95461 756 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 ANXA13P27216 316 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 IQCB1Q15051 598 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 PHF20Q9BVI0 1012 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 ABCD1P33897 745 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 HSPA1LP34931 641 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 MECOMQ03112 1051 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 APOBRQ0VD83 1088 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 GNL2Q13823 731 aaKnown RBP6.7□□□□□ -1.34
PTPRD-206ENST00000397617 TRIM14Q14142 442 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 RESP18Q5W5W9 173 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 LCORLQ8N3X6 602 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 MTMR8Q96EF0 704 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 IGKV6D-41A0A0C4DH26 115 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 NUTM2BA6NNL0 878 aaPredicted RBP6.7□□□□□ -1.34
PTPRD-206ENST00000397617 NUTM2EB1AL46 878 aaPredicted RBP6.7□□□□□ -1.34
PTPRD-206ENST00000397617 PPP4R3AQ6IN85 833 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 NBPF11Q86T75 865 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 GMCL1Q96IK5 515 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 ANKIB1Q9P2G1 1089 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 MYPNQ86TC9 1320 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 SYCE3A1L190 88 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 OFD1O75665 1012 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 SYKP43405 635 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 GAS2L3Q86XJ1 694 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 ZNF444Q8N0Y2 327 aaPredicted RBP6.7□□□□□ -1.34
PTPRD-206ENST00000397617 PNMA1Q8ND90 353 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 TMOD2Q9NZR1 351 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 PCDHA7Q9UN72 937 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 TAF1P21675 1872 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 RHBDL3P58872 404 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 NOL8Q76FK4 1167 aaKnown RBP6.7□□□□□ -1.34
PTPRD-206ENST00000397617 MICU3Q86XE3 530 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 CREBRFQ8IUR6 639 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 MXD3Q9BW11 206 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 CDK5RAP2Q96SN8 1893 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 NPHP1O15259 732 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 FAM193AP78312 1265 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 MYL5Q02045 173 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 MAP3K10Q02779 954 aa6.7□□□□□ -1.34
PTPRD-206ENST00000397617 BAG6P46379 1132 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 AMPD3Q01432 767 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 CTR9Q6PD62 1173 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 NAA15Q9BXJ9 866 aaKnown RBP6.69□□□□□ -1.34
PTPRD-206ENST00000397617 KAT14Q9H8E8 782 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 STK32BQ9NY57 414 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms