RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 IGHDP01880 384 aa8.08□□□□□ -1.12
SMCO1-201ENST00000397537 U2AF1L5P0DN76 240 aaPredicted RBP8.08□□□□□ -1.12
SMCO1-201ENST00000397537 NCAM1P13591 858 aa8.08□□□□□ -1.12
SMCO1-201ENST00000397537 SLC5A1P13866 664 aa8.08□□□□□ -1.12
SMCO1-201ENST00000397537 WNT7BP56706 349 aa8.08□□□□□ -1.12
SMCO1-201ENST00000397537 TMPRSS15P98073 1019 aa8.08□□□□□ -1.12
SMCO1-201ENST00000397537 U2AF1Q01081 240 aaKnown RBP eCLIP8.08□□□□□ -1.12
SMCO1-201ENST00000397537 NEXNQ0ZGT2 675 aa8.08□□□□□ -1.12
SMCO1-201ENST00000397537 PTPN21Q16825 1174 aa8.08□□□□□ -1.12
SMCO1-201ENST00000397537 FAM186BQ8IYM0 893 aa8.08□□□□□ -1.12
SMCO1-201ENST00000397537 ZNRF3Q9ULT6 936 aa8.08□□□□□ -1.12
SMCO1-201ENST00000397537 CHMP3Q9Y3E7 222 aa8.08□□□□□ -1.12
SMCO1-201ENST00000397537 TTC37Q6PGP7 1564 aa8.08□□□□□ -1.12
SMCO1-201ENST00000397537 UPK3BL1B0FP48 263 aa8.08□□□□□ -1.12
SMCO1-201ENST00000397537 UPK3BL2E5RIL1 263 aa8.08□□□□□ -1.12
SMCO1-201ENST00000397537 J3KRW8 73 aa8.08□□□□□ -1.12
SMCO1-201ENST00000397537 EML1O00423 815 aa8.08□□□□□ -1.12
SMCO1-201ENST00000397537 HSP90AB1P08238 724 aaKnown RBP8.08□□□□□ -1.12
SMCO1-201ENST00000397537 ERVK-9P63128 1117 aa8.08□□□□□ -1.12
SMCO1-201ENST00000397537 SEPT2Q15019 361 aa8.08□□□□□ -1.12
SMCO1-201ENST00000397537 PCBP1Q15365 356 aaKnown RBP eCLIP8.08□□□□□ -1.12
SMCO1-201ENST00000397537 RTN1Q16799 776 aa8.08□□□□□ -1.12
SMCO1-201ENST00000397537 ATP13A4Q4VNC1 1196 aa8.08□□□□□ -1.12
SMCO1-201ENST00000397537 GPR158Q5T848 1215 aa8.08□□□□□ -1.12
SMCO1-201ENST00000397537 PKN3Q6P5Z2 889 aa8.08□□□□□ -1.12
SMCO1-201ENST00000397537 BAP1Q92560 729 aa8.08□□□□□ -1.12
SMCO1-201ENST00000397537 CLIP3Q96DZ5 547 aa8.08□□□□□ -1.12
SMCO1-201ENST00000397537 NAA15Q9BXJ9 866 aaKnown RBP8.08□□□□□ -1.12
SMCO1-201ENST00000397537 LRRC3Q9BY71 257 aa8.08□□□□□ -1.12
SMCO1-201ENST00000397537 MAN1C1Q9NR34 630 aa8.08□□□□□ -1.12
SMCO1-201ENST00000397537 INTS7Q9NVH2 962 aaKnown RBP8.08□□□□□ -1.12
SMCO1-201ENST00000397537 FEZ2Q9UHY8 353 aaPredicted RBP8.08□□□□□ -1.12
SMCO1-201ENST00000397537 WASHC2AQ641Q2 1341 aa8.07□□□□□ -1.12
SMCO1-201ENST00000397537 POGZQ7Z3K3 1410 aa8.07□□□□□ -1.12
SMCO1-201ENST00000397537 A0A087WZG4 1122 aa8.07□□□□□ -1.12
SMCO1-201ENST00000397537 CLGNO14967 610 aa8.07□□□□□ -1.12
SMCO1-201ENST00000397537 RPLP1P05386 114 aaKnown RBP8.07□□□□□ -1.12
SMCO1-201ENST00000397537 ARAFP10398 606 aa8.07□□□□□ -1.12
SMCO1-201ENST00000397537 PF4V1P10720 104 aa8.07□□□□□ -1.12
SMCO1-201ENST00000397537 TFE3P19532 575 aaPredicted RBP8.07□□□□□ -1.12
SMCO1-201ENST00000397537 CCT5P48643 541 aa8.07□□□□□ -1.12
SMCO1-201ENST00000397537 TBX2Q13207 712 aaPredicted RBP8.07□□□□□ -1.12
SMCO1-201ENST00000397537 ZC3H12BQ5HYM0 836 aaKnown RBP8.07□□□□□ -1.12
SMCO1-201ENST00000397537 TTLL5Q6EMB2 1281 aa8.07□□□□□ -1.12
SMCO1-201ENST00000397537 PTCRAQ6ISU1 281 aaPredicted RBP8.07□□□□□ -1.12
SMCO1-201ENST00000397537 RUFY4Q6ZNE9 571 aa8.07□□□□□ -1.12
SMCO1-201ENST00000397537 TRIM22Q8IYM9 498 aa8.07□□□□□ -1.12
SMCO1-201ENST00000397537 FRS2Q8WU20 508 aa8.07□□□□□ -1.12
SMCO1-201ENST00000397537 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.07□□□□□ -1.12
SMCO1-201ENST00000397537 TNIP3Q96KP6 325 aa8.07□□□□□ -1.12
SMCO1-201ENST00000397537 TBATAQ96M53 351 aa8.07□□□□□ -1.12
SMCO1-201ENST00000397537 KCNK17Q96T54 332 aa8.07□□□□□ -1.12
SMCO1-201ENST00000397537 SLC12A5Q9H2X9 1139 aa8.07□□□□□ -1.12
SMCO1-201ENST00000397537 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.07□□□□□ -1.12
SMCO1-201ENST00000397537 TCF7L1Q9HCS4 588 aa8.07□□□□□ -1.12
SMCO1-201ENST00000397537 SH3GLB2Q9NR46 395 aa8.07□□□□□ -1.12
SMCO1-201ENST00000397537 IGF1RP08069 1367 aa8.07□□□□□ -1.12
SMCO1-201ENST00000397537 MAP3K6O95382 1288 aa8.06□□□□□ -1.12
SMCO1-201ENST00000397537 ATICP31939 592 aa8.06□□□□□ -1.12
SMCO1-201ENST00000397537 ADD2P35612 726 aa8.06□□□□□ -1.12
SMCO1-201ENST00000397537 DHCR24Q15392 516 aa8.06□□□□□ -1.12
SMCO1-201ENST00000397537 ABCB5Q2M3G0 1257 aa8.06□□□□□ -1.12
SMCO1-201ENST00000397537 ARHGAP29Q52LW3 1261 aa8.06□□□□□ -1.12
SMCO1-201ENST00000397537 SV2BQ7L1I2 683 aa8.06□□□□□ -1.12
SMCO1-201ENST00000397537 SCUBE3Q8IX30 993 aa8.06□□□□□ -1.12
SMCO1-201ENST00000397537 PPM1KQ8N3J5 372 aa8.06□□□□□ -1.12
SMCO1-201ENST00000397537 RBBP8NLQ8NC74 664 aaPredicted RBP8.06□□□□□ -1.12
SMCO1-201ENST00000397537 FOXJ1Q92949 421 aa8.06□□□□□ -1.12
SMCO1-201ENST00000397537 TTC17Q96AE7 1141 aa8.06□□□□□ -1.12
SMCO1-201ENST00000397537 TBC1D20Q96BZ9 403 aa8.06□□□□□ -1.12
SMCO1-201ENST00000397537 RCAN3Q9UKA8 241 aa8.06□□□□□ -1.12
SMCO1-201ENST00000397537 BRINP1O60477 761 aa8.06□□□□□ -1.12
SMCO1-201ENST00000397537 CELA3AP09093 270 aa8.06□□□□□ -1.12
SMCO1-201ENST00000397537 LPOP22079 712 aaPredicted RBP8.06□□□□□ -1.12
SMCO1-201ENST00000397537 GTF2E1P29083 439 aaPredicted RBP8.06□□□□□ -1.12
SMCO1-201ENST00000397537 ALDH5A1P51649 535 aaPredicted RBP8.06□□□□□ -1.12
SMCO1-201ENST00000397537 SMTNP53814 917 aa8.06□□□□□ -1.12
SMCO1-201ENST00000397537 WASHC5Q12768 1159 aa8.06□□□□□ -1.12
SMCO1-201ENST00000397537 TRIM14Q14142 442 aa8.06□□□□□ -1.12
SMCO1-201ENST00000397537 SEPT7Q16181 437 aaKnown RBP8.06□□□□□ -1.12
SMCO1-201ENST00000397537 HGSNATQ68CP4 663 aa8.06□□□□□ -1.12
SMCO1-201ENST00000397537 FAM180BQ6P0A1 224 aa8.06□□□□□ -1.12
SMCO1-201ENST00000397537 XKR5Q6UX68 686 aa8.06□□□□□ -1.12
SMCO1-201ENST00000397537 BNC2Q6ZN30 1099 aaPredicted RBP8.06□□□□□ -1.12
SMCO1-201ENST00000397537 HSCBQ8IWL3 235 aa8.06□□□□□ -1.12
SMCO1-201ENST00000397537 GALNT12Q8IXK2 581 aa8.06□□□□□ -1.12
SMCO1-201ENST00000397537 NDUFAF2Q8N183 169 aa8.06□□□□□ -1.12
SMCO1-201ENST00000397537 GIMAP8Q8ND71 665 aaPredicted RBP8.06□□□□□ -1.12
SMCO1-201ENST00000397537 CDHR1Q96JP9 859 aa8.06□□□□□ -1.12
SMCO1-201ENST00000397537 LRRC4BQ9NT99 713 aa8.06□□□□□ -1.12
SMCO1-201ENST00000397537 FRMPD1Q5SYB0 1578 aa8.05□□□□□ -1.12
SMCO1-201ENST00000397537 A0A1W2PQH9 124 aa8.05□□□□□ -1.12
SMCO1-201ENST00000397537 PHACTR2O75167 634 aa8.05□□□□□ -1.12
SMCO1-201ENST00000397537 F13A1P00488 732 aa8.05□□□□□ -1.12
SMCO1-201ENST00000397537 HIRAP54198 1017 aaPredicted RBP8.05□□□□□ -1.12
SMCO1-201ENST00000397537 ADCY1Q08828 1119 aa8.05□□□□□ -1.12
SMCO1-201ENST00000397537 LAMC2Q13753 1193 aa8.05□□□□□ -1.12
SMCO1-201ENST00000397537 CBARPQ8N350 705 aaPredicted RBP8.05□□□□□ -1.12
SMCO1-201ENST00000397537 NKAIN3Q8N8D7 197 aa8.05□□□□□ -1.12
SMCO1-201ENST00000397537 ESF1Q9H501 851 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms