RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 MKRN3Q13064 507 aaKnown RBP12.63□□□□□ -0.39
IFT140-202ENST00000397417 MTX1Q13505 466 aa12.63□□□□□ -0.39
IFT140-202ENST00000397417 TOB2Q14106 344 aaPredicted RBP12.63□□□□□ -0.39
IFT140-202ENST00000397417 CYB5R4Q7L1T6 521 aa12.63□□□□□ -0.39
IFT140-202ENST00000397417 IQUBQ8NA54 791 aa12.63□□□□□ -0.39
IFT140-202ENST00000397417 RDH13Q8NBN7 331 aa12.63□□□□□ -0.39
IFT140-202ENST00000397417 BICD1Q96G01 975 aa12.63□□□□□ -0.39
IFT140-202ENST00000397417 MYO5BQ9ULV0 1848 aa12.63□□□□□ -0.39
IFT140-202ENST00000397417 PRPF4BQ13523 1007 aaKnown RBP12.63□□□□□ -0.39
IFT140-202ENST00000397417 NCAPH2Q6IBW4 605 aa12.63□□□□□ -0.39
IFT140-202ENST00000397417 RUFY1Q96T51 708 aa12.63□□□□□ -0.39
IFT140-202ENST00000397417 TSG101Q99816 390 aa12.63□□□□□ -0.39
IFT140-202ENST00000397417 CTNND2Q9UQB3 1225 aa12.63□□□□□ -0.39
IFT140-202ENST00000397417 KIF20BQ96Q89 1820 aa12.63□□□□□ -0.39
IFT140-202ENST00000397417 AXDND1Q5T1B0 1012 aaPredicted RBP12.63□□□□□ -0.39
IFT140-202ENST00000397417 ARGLU1Q9NWB6 273 aaPredicted RBP12.63□□□□□ -0.39
IFT140-202ENST00000397417 CBX1P83916 185 aa12.62□□□□□ -0.39
IFT140-202ENST00000397417 DPH6Q7L8W6 267 aa12.62□□□□□ -0.39
IFT140-202ENST00000397417 TTC16Q8NEE8 873 aa12.62□□□□□ -0.39
IFT140-202ENST00000397417 CSRNP1Q96S65 589 aa12.62□□□□□ -0.39
IFT140-202ENST00000397417 TDRD3Q9H7E2 651 aaKnown RBP12.62□□□□□ -0.39
IFT140-202ENST00000397417 SENP2Q9HC62 589 aa12.62□□□□□ -0.39
IFT140-202ENST00000397417 NFE2L3Q9Y4A8 694 aa12.62□□□□□ -0.39
IFT140-202ENST00000397417 NEDD4P46934 1319 aa12.62□□□□□ -0.39
IFT140-202ENST00000397417 ATP2B4P23634 1241 aa12.62□□□□□ -0.39
IFT140-202ENST00000397417 CACNB1Q02641 598 aaPredicted RBP12.62□□□□□ -0.39
IFT140-202ENST00000397417 KIF18AQ8NI77 898 aa12.62□□□□□ -0.39
IFT140-202ENST00000397417 MEGF6O75095 1541 aa12.62□□□□□ -0.39
IFT140-202ENST00000397417 UBE2Q2LH0YL09 131 aa12.62□□□□□ -0.39
IFT140-202ENST00000397417 PDE4DQ08499 809 aa12.62□□□□□ -0.39
IFT140-202ENST00000397417 SPA17Q15506 151 aa12.62□□□□□ -0.39
IFT140-202ENST00000397417 DCAF17Q5H9S7 520 aaPredicted RBP12.62□□□□□ -0.39
IFT140-202ENST00000397417 ZNF274Q96GC6 653 aaPredicted RBP12.62□□□□□ -0.39
IFT140-202ENST00000397417 MRVI1Q9Y6F6 885 aa12.62□□□□□ -0.39
IFT140-202ENST00000397417 PXDNQ92626 1479 aa12.61□□□□□ -0.39
IFT140-202ENST00000397417 PSMA7O14818 248 aa12.61□□□□□ -0.39
IFT140-202ENST00000397417 AMPD3Q01432 767 aa12.61□□□□□ -0.39
IFT140-202ENST00000397417 PTGDRQ13258 359 aa12.61□□□□□ -0.39
IFT140-202ENST00000397417 SNW1Q13573 536 aaKnown RBP12.61□□□□□ -0.39
IFT140-202ENST00000397417 PTPROQ16827 1216 aa12.61□□□□□ -0.39
IFT140-202ENST00000397417 CERKLQ49MI3 558 aaPredicted RBP12.61□□□□□ -0.39
IFT140-202ENST00000397417 CEP135Q66GS9 1140 aa12.61□□□□□ -0.39
IFT140-202ENST00000397417 NOSTRINQ8IVI9 506 aa12.61□□□□□ -0.39
IFT140-202ENST00000397417 SNX29Q8TEQ0 813 aa12.61□□□□□ -0.39
IFT140-202ENST00000397417 SPAG5Q96R06 1193 aa12.61□□□□□ -0.39
IFT140-202ENST00000397417 MAP7D2Q96T17 732 aa12.61□□□□□ -0.39
IFT140-202ENST00000397417 LLPHQ9BRT6 129 aaKnown RBP12.61□□□□□ -0.39
IFT140-202ENST00000397417 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.61□□□□□ -0.39
IFT140-202ENST00000397417 RIPOR2Q9Y4F9 1068 aa12.61□□□□□ -0.39
IFT140-202ENST00000397417 RIMS1Q86UR5 1692 aaKnown RBP12.61□□□□□ -0.39
IFT140-202ENST00000397417 TMCO5BA8MYB1 307 aa12.61□□□□□ -0.39
IFT140-202ENST00000397417 HSP90B2PQ58FF3 399 aa12.61□□□□□ -0.39
IFT140-202ENST00000397417 RGS22Q8NE09 1264 aa12.61□□□□□ -0.39
IFT140-202ENST00000397417 FAM84BQ96KN1 310 aaPredicted RBP12.61□□□□□ -0.39
IFT140-202ENST00000397417 PAGR1Q9BTK6 254 aa12.61□□□□□ -0.39
IFT140-202ENST00000397417 TMEM232C9JQI7 657 aa12.61□□□□□ -0.39
IFT140-202ENST00000397417 MRPL12P52815 198 aaKnown RBP12.61□□□□□ -0.39
IFT140-202ENST00000397417 UBXN1Q04323 297 aa12.61□□□□□ -0.39
IFT140-202ENST00000397417 CUL4AQ13619 759 aa12.61□□□□□ -0.39
IFT140-202ENST00000397417 REXO1Q8N1G1 1221 aaKnown RBP12.61□□□□□ -0.39
IFT140-202ENST00000397417 DLC1Q96QB1 1528 aa12.61□□□□□ -0.39
IFT140-202ENST00000397417 IGSF3O75054 1194 aa12.6□□□□□ -0.39
IFT140-202ENST00000397417 ALAS1P13196 640 aa12.6□□□□□ -0.39
IFT140-202ENST00000397417 GPR162Q16538 588 aa12.6□□□□□ -0.39
IFT140-202ENST00000397417 AOC3Q16853 763 aa12.6□□□□□ -0.39
IFT140-202ENST00000397417 CLSTN2Q9H4D0 955 aa12.6□□□□□ -0.39
IFT140-202ENST00000397417 ZNF277Q9NRM2 450 aaPredicted RBP12.6□□□□□ -0.39
IFT140-202ENST00000397417 BSDC1Q9NW68 430 aaPredicted RBP12.6□□□□□ -0.39
IFT140-202ENST00000397417 TAB2Q9NYJ8 693 aa12.6□□□□□ -0.39
IFT140-202ENST00000397417 LRWD1Q9UFC0 647 aa12.6□□□□□ -0.39
IFT140-202ENST00000397417 THRAP3Q9Y2W1 955 aaKnown RBP12.6□□□□□ -0.39
IFT140-202ENST00000397417 SPATA31A1Q5TZJ5 1347 aa12.6□□□□□ -0.39
IFT140-202ENST00000397417 UBN2Q6ZU65 1347 aa12.6□□□□□ -0.39
IFT140-202ENST00000397417 TRAF5O00463 557 aa12.6□□□□□ -0.39
IFT140-202ENST00000397417 RGS12O14924 1447 aa12.6□□□□□ -0.39
IFT140-202ENST00000397417 ICA1Q05084 483 aa12.6□□□□□ -0.39
IFT140-202ENST00000397417 GRAPQ13588 217 aa12.6□□□□□ -0.39
IFT140-202ENST00000397417 GRAPLQ8TC17 118 aaPredicted RBP12.6□□□□□ -0.39
IFT140-202ENST00000397417 PSMB7Q99436 277 aa12.6□□□□□ -0.39
IFT140-202ENST00000397417 ARPP21Q9UBL0 812 aaPredicted RBP12.6□□□□□ -0.39
IFT140-202ENST00000397417 NRBP1Q9UHY1 535 aa12.6□□□□□ -0.39
IFT140-202ENST00000397417 ZBTB12Q9Y330 459 aaPredicted RBP12.6□□□□□ -0.39
IFT140-202ENST00000397417 PPP1R12BO60237 982 aaPredicted RBP12.6□□□□□ -0.39
IFT140-202ENST00000397417 RNASE9P60153 205 aaKnown RBP12.6□□□□□ -0.39
IFT140-202ENST00000397417 CCDC84Q86UT8 332 aaPredicted RBP12.6□□□□□ -0.39
IFT140-202ENST00000397417 ZNF397Q8NF99 534 aaPredicted RBP12.6□□□□□ -0.39
IFT140-202ENST00000397417 TBC1D22AQ8WUA7 517 aa12.6□□□□□ -0.39
IFT140-202ENST00000397417 RBM28Q9NW13 759 aaKnown RBP12.6□□□□□ -0.39
IFT140-202ENST00000397417 RTEL1Q9NZ71 1219 aa12.6□□□□□ -0.39
IFT140-202ENST00000397417 CPDO75976 1380 aa12.6□□□□□ -0.39
IFT140-202ENST00000397417 YEATS4O95619 227 aa12.59□□□□□ -0.39
IFT140-202ENST00000397417 PRAMEF18Q5VWM3 479 aa12.59□□□□□ -0.39
IFT140-202ENST00000397417 TXNRD3Q86VQ6 643 aa12.59□□□□□ -0.39
IFT140-202ENST00000397417 PAF1Q8N7H5 531 aa12.59□□□□□ -0.39
IFT140-202ENST00000397417 CERKQ8TCT0 537 aa12.59□□□□□ -0.39
IFT140-202ENST00000397417 JADE2Q9NQC1 790 aa12.59□□□□□ -0.39
IFT140-202ENST00000397417 CARMIL3Q8ND23 1372 aa12.59□□□□□ -0.39
IFT140-202ENST00000397417 ELP1O95163 1332 aa12.59□□□□□ -0.39
IFT140-202ENST00000397417 NONOQ15233 471 aaKnown RBP eCLIP12.59□□□□□ -0.39
IFT140-202ENST00000397417 PRR16Q569H4 304 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms