RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 ANAPC4Q9UJX5 808 aa25.2■■□□□ 1.62
TSPAN4-206ENST00000397408 PDHXO00330 501 aa25.19■■□□□ 1.62
TSPAN4-206ENST00000397408 HAND2P61296 217 aa25.19■■□□□ 1.62
TSPAN4-206ENST00000397408 CRHR2Q13324 411 aa25.19■■□□□ 1.62
TSPAN4-206ENST00000397408 SH3D19Q5HYK7 790 aa25.19■■□□□ 1.62
TSPAN4-206ENST00000397408 ACER1Q8TDN7 264 aa25.19■■□□□ 1.62
TSPAN4-206ENST00000397408 R3HDMLQ9H3Y0 253 aa25.19■■□□□ 1.62
TSPAN4-206ENST00000397408 ICA1Q05084 483 aa25.18■■□□□ 1.62
TSPAN4-206ENST00000397408 ZNF444Q8N0Y2 327 aaPredicted RBP25.18■■□□□ 1.62
TSPAN4-206ENST00000397408 PROCA1Q8NCQ7 364 aaPredicted RBP25.18■■□□□ 1.62
TSPAN4-206ENST00000397408 TMOD4Q9NZQ9 345 aa25.18■■□□□ 1.62
TSPAN4-206ENST00000397408 AGTPBP1Q9UPW5 1226 aa25.18■■□□□ 1.62
TSPAN4-206ENST00000397408 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.18■■□□□ 1.62
TSPAN4-206ENST00000397408 GREB1LQ9C091 1923 aaPredicted RBP25.17■■□□□ 1.62
TSPAN4-206ENST00000397408 C19orf81C9J6K1 198 aa25.17■■□□□ 1.62
TSPAN4-206ENST00000397408 ZYXQ15942 572 aaKnown RBP25.17■■□□□ 1.62
TSPAN4-206ENST00000397408 LAMA4Q16363 1823 aa25.17■■□□□ 1.62
TSPAN4-206ENST00000397408 TREML2Q5T2D2 321 aa25.16■■□□□ 1.62
TSPAN4-206ENST00000397408 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.16■■□□□ 1.62
TSPAN4-206ENST00000397408 ZFYVE28Q9HCC9 887 aa25.16■■□□□ 1.62
TSPAN4-206ENST00000397408 INCENPQ9NQS7 918 aa25.16■■□□□ 1.62
TSPAN4-206ENST00000397408 TACC3Q9Y6A5 838 aa25.16■■□□□ 1.62
TSPAN4-206ENST00000397408 USP17L2Q6R6M4 530 aa25.15■■□□□ 1.62
TSPAN4-206ENST00000397408 KIAA1683Q9H0B3 1180 aa25.15■■□□□ 1.62
TSPAN4-206ENST00000397408 PRDM10Q9NQV6 1147 aa25.15■■□□□ 1.62
TSPAN4-206ENST00000397408 A0A1W2PRG0 241 aa25.14■■□□□ 1.62
TSPAN4-206ENST00000397408 CDC45O75419 566 aa25.14■■□□□ 1.62
TSPAN4-206ENST00000397408 TBC1D10CQ8IV04 446 aa25.14■■□□□ 1.62
TSPAN4-206ENST00000397408 PARK7Q99497 189 aaKnown RBP25.14■■□□□ 1.62
TSPAN4-206ENST00000397408 ESYT1Q9BSJ8 1104 aa25.14■■□□□ 1.62
TSPAN4-206ENST00000397408 NBPF3Q9H094 633 aa25.14■■□□□ 1.62
TSPAN4-206ENST00000397408 KANSL2Q9H9L4 492 aa25.14■■□□□ 1.62
TSPAN4-206ENST00000397408 ARHGEF10LQ9HCE6 1279 aa25.14■■□□□ 1.62
TSPAN4-206ENST00000397408 EMILIN3Q9NT22 766 aa25.14■■□□□ 1.62
TSPAN4-206ENST00000397408 CTNNA3Q9UI47 895 aa25.14■■□□□ 1.62
TSPAN4-206ENST00000397408 SLC45A1Q9Y2W3 748 aa25.14■■□□□ 1.62
TSPAN4-206ENST00000397408 CASP8AP2Q9UKL3 1982 aa25.14■■□□□ 1.61
TSPAN4-206ENST00000397408 GPR25O00155 361 aa25.13■■□□□ 1.61
TSPAN4-206ENST00000397408 ZNF213O14771 459 aa25.13■■□□□ 1.61
TSPAN4-206ENST00000397408 TSPY3P0CV98 308 aa25.13■■□□□ 1.61
TSPAN4-206ENST00000397408 TSPY8P0CW00 308 aa25.13■■□□□ 1.61
TSPAN4-206ENST00000397408 USP14P54578 494 aa25.13■■□□□ 1.61
TSPAN4-206ENST00000397408 ATP2B2Q01814 1243 aa25.13■■□□□ 1.61
TSPAN4-206ENST00000397408 PTH1RQ03431 593 aa25.13■■□□□ 1.61
TSPAN4-206ENST00000397408 FAM47AQ5JRC9 791 aa25.13■■□□□ 1.61
TSPAN4-206ENST00000397408 TOMM22Q9NS69 142 aa25.13■■□□□ 1.61
TSPAN4-206ENST00000397408 PLIN4Q96Q06 1357 aa25.13■■□□□ 1.61
TSPAN4-206ENST00000397408 ORC4O43929 436 aa25.12■■□□□ 1.61
TSPAN4-206ENST00000397408 CYP2C8P10632 490 aa25.12■■□□□ 1.61
TSPAN4-206ENST00000397408 SIAH1Q8IUQ4 282 aa25.12■■□□□ 1.61
TSPAN4-206ENST00000397408 C12orf42Q96LP6 360 aa25.12■■□□□ 1.61
TSPAN4-206ENST00000397408 FGRP09769 529 aa25.12■■□□□ 1.61
TSPAN4-206ENST00000397408 EEF2P13639 858 aaKnown RBP25.12■■□□□ 1.61
TSPAN4-206ENST00000397408 TFAP4Q01664 338 aa25.12■■□□□ 1.61
TSPAN4-206ENST00000397408 PABPC4Q13310 644 aaKnown RBP eCLIP25.12■■□□□ 1.613e-8■■■■■ 35.6
TSPAN4-206ENST00000397408 IMMTQ16891 758 aaKnown RBP25.12■■□□□ 1.61
TSPAN4-206ENST00000397408 NOM1Q5C9Z4 860 aaKnown RBP25.12■■□□□ 1.61
TSPAN4-206ENST00000397408 RRP12Q5JTH9 1297 aaKnown RBP25.12■■□□□ 1.61
TSPAN4-206ENST00000397408 AKNAD1Q5T1N1 836 aa25.12■■□□□ 1.61
TSPAN4-206ENST00000397408 CASC1Q6TDU7 716 aa25.12■■□□□ 1.61
TSPAN4-206ENST00000397408 NEDD1Q8NHV4 660 aa25.12■■□□□ 1.61
TSPAN4-206ENST00000397408 STAG1Q8WVM7 1258 aa25.12■■□□□ 1.61
TSPAN4-206ENST00000397408 SH2D4AQ9H788 454 aa25.12■■□□□ 1.61
TSPAN4-206ENST00000397408 IGKV6D-41A0A0C4DH26 115 aa25.11■■□□□ 1.61
TSPAN4-206ENST00000397408 TSPY2A6NKD2 308 aa25.11■■□□□ 1.61
TSPAN4-206ENST00000397408 RANBP6O60518 1105 aaKnown RBP25.11■■□□□ 1.61
TSPAN4-206ENST00000397408 TLR2O60603 784 aa25.11■■□□□ 1.61
TSPAN4-206ENST00000397408 ZNF296Q8WUU4 475 aaPredicted RBP25.11■■□□□ 1.61
TSPAN4-206ENST00000397408 PNMA3Q9UL41 463 aa25.11■■□□□ 1.61
TSPAN4-206ENST00000397408 TMX2Q9Y320 296 aa25.11■■□□□ 1.61
TSPAN4-206ENST00000397408 PCP11498 1178 aaKnown RBP25.1■■□□□ 1.61
TSPAN4-206ENST00000397408 VCAM1P19320 739 aa25.1■■□□□ 1.61
TSPAN4-206ENST00000397408 MFSD6Q6ZSS7 791 aa25.1■■□□□ 1.61
TSPAN4-206ENST00000397408 KIAA1211Q6ZU35 1233 aa25.1■■□□□ 1.61
TSPAN4-206ENST00000397408 CEP95Q96GE4 821 aa25.1■■□□□ 1.61
TSPAN4-206ENST00000397408 ADGRA2Q96PE1 1338 aa25.1■■□□□ 1.61
TSPAN4-206ENST00000397408 RNF41Q9H4P4 317 aaPredicted RBP25.1■■□□□ 1.61
TSPAN4-206ENST00000397408 U3KPZ7 1027 aaPredicted RBP25.1■■□□□ 1.61
TSPAN4-206ENST00000397408 NEDD4P46934 1319 aa25.09■■□□□ 1.61
TSPAN4-206ENST00000397408 SMCR8Q8TEV9 937 aaPredicted RBP25.09■■□□□ 1.61
TSPAN4-206ENST00000397408 FKTNO75072 461 aa25.08■■□□□ 1.61
TSPAN4-206ENST00000397408 OSBPP22059 807 aa25.08■■□□□ 1.61
TSPAN4-206ENST00000397408 IRX3P78415 501 aaPredicted RBP25.08■■□□□ 1.61
TSPAN4-206ENST00000397408 ASCC2Q9H1I8 757 aaPredicted RBP25.08■■□□□ 1.61
TSPAN4-206ENST00000397408 MTMR4Q9NYA4 1195 aa25.08■■□□□ 1.61
TSPAN4-206ENST00000397408 NYAP2Q9P242 653 aa25.08■■□□□ 1.61
TSPAN4-206ENST00000397408 CPA4Q9UI42 421 aa25.08■■□□□ 1.61
TSPAN4-206ENST00000397408 HOXA7P31268 230 aaPredicted RBP25.07■■□□□ 1.6
TSPAN4-206ENST00000397408 LSG1Q9H089 658 aaKnown RBP25.07■■□□□ 1.6
TSPAN4-206ENST00000397408 VCPKMTQ9H867 229 aa25.07■■□□□ 1.6
TSPAN4-206ENST00000397408 ANO2Q9NQ90 1003 aa25.07■■□□□ 1.6
TSPAN4-206ENST00000397408 MYH4Q9Y623 1939 aa25.06■■□□□ 1.6
TSPAN4-206ENST00000397408 KIAA1755Q5JYT7 1200 aa25.06■■□□□ 1.6
TSPAN4-206ENST00000397408 COL13A1Q5TAT6 717 aaPredicted RBP25.06■■□□□ 1.6
TSPAN4-206ENST00000397408 SPICE1Q8N0Z3 855 aa25.06■■□□□ 1.6
TSPAN4-206ENST00000397408 MAP4K1Q92918 833 aa25.06■■□□□ 1.6
TSPAN4-206ENST00000397408 CLIP2Q9UDT6 1046 aa25.06■■□□□ 1.6
TSPAN4-206ENST00000397408 RBM8AQ9Y5S9 174 aaKnown RBP25.06■■□□□ 1.6
TSPAN4-206ENST00000397408 NMT2O60551 498 aa25.05■■□□□ 1.6
TSPAN4-206ENST00000397408 TTLL1O95922 423 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms