RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 HAUS1Q96CS2 278 aa11.37□□□□□ -0.59
COL4A4-201ENST00000396625 RIOK1Q9BRS2 568 aaKnown RBP11.37□□□□□ -0.59
COL4A4-201ENST00000396625 ATP5J2-PTCD1G3V325 749 aa11.36□□□□□ -0.59
COL4A4-201ENST00000396625 S100BP04271 92 aaPredicted RBP11.36□□□□□ -0.59
COL4A4-201ENST00000396625 LONRF2Q1L5Z9 754 aa11.36□□□□□ -0.59
COL4A4-201ENST00000396625 ANKRD35Q8N283 1001 aa11.36□□□□□ -0.59
COL4A4-201ENST00000396625 TCHHQ07283 1943 aa11.36□□□□□ -0.59
COL4A4-201ENST00000396625 ADCY8P40145 1251 aa11.36□□□□□ -0.59
COL4A4-201ENST00000396625 FAM69CQ0P6D2 419 aa11.36□□□□□ -0.59
COL4A4-201ENST00000396625 MAD1L1Q9Y6D9 718 aa11.36□□□□□ -0.59
COL4A4-201ENST00000396625 ARHGAP6O43182 974 aa11.36□□□□□ -0.59
COL4A4-201ENST00000396625 ZFXP17010 805 aaPredicted RBP11.36□□□□□ -0.59
COL4A4-201ENST00000396625 FANCCQ00597 558 aa11.36□□□□□ -0.59
COL4A4-201ENST00000396625 PAWRQ96IZ0 340 aaKnown RBP11.36□□□□□ -0.59
COL4A4-201ENST00000396625 POLR3CQ9BUI4 534 aaPredicted RBP11.36□□□□□ -0.59
COL4A4-201ENST00000396625 KRIT1O00522 736 aa11.36□□□□□ -0.59
COL4A4-201ENST00000396625 HAUS3Q68CZ6 603 aa11.36□□□□□ -0.59
COL4A4-201ENST00000396625 ZBTB12Q9Y330 459 aaPredicted RBP11.36□□□□□ -0.59
COL4A4-201ENST00000396625 PTPDC1A2A3K4 754 aa11.36□□□□□ -0.59
COL4A4-201ENST00000396625 MAP3K7O43318 606 aa11.36□□□□□ -0.59
COL4A4-201ENST00000396625 LRRC8CQ8TDW0 803 aa11.36□□□□□ -0.59
COL4A4-201ENST00000396625 MAIP1Q8WWC4 291 aa11.36□□□□□ -0.59
COL4A4-201ENST00000396625 KRT82Q9NSB4 513 aa11.36□□□□□ -0.59
COL4A4-201ENST00000396625 SBNO2Q9Y2G9 1366 aa11.36□□□□□ -0.59
COL4A4-201ENST00000396625 E9PMD0 336 aa11.36□□□□□ -0.59
COL4A4-201ENST00000396625 SKOR1P84550 965 aa11.36□□□□□ -0.59
COL4A4-201ENST00000396625 TRIM50Q86XT4 487 aa11.36□□□□□ -0.59
COL4A4-201ENST00000396625 OGFOD1Q8N543 542 aa11.36□□□□□ -0.59
COL4A4-201ENST00000396625 TYW1Q9NV66 732 aaKnown RBP11.36□□□□□ -0.59
COL4A4-201ENST00000396625 PLCG2P16885 1265 aa11.36□□□□□ -0.59
COL4A4-201ENST00000396625 SAT1P21673 171 aa11.36□□□□□ -0.59
COL4A4-201ENST00000396625 MAGEB6Q8N7X4 407 aa11.36□□□□□ -0.59
COL4A4-201ENST00000396625 GIMAP4Q9NUV9 329 aa11.36□□□□□ -0.59
COL4A4-201ENST00000396625 SPDYE16A6NNV3 312 aaPredicted RBP11.36□□□□□ -0.59
COL4A4-201ENST00000396625 PYGLP06737 847 aa11.36□□□□□ -0.59
COL4A4-201ENST00000396625 SPDYE2Q495Y8 402 aa11.36□□□□□ -0.59
COL4A4-201ENST00000396625 MRPL44Q9H9J2 332 aaKnown RBP11.36□□□□□ -0.59
COL4A4-201ENST00000396625 AMFRQ9UKV5 643 aa11.36□□□□□ -0.59
COL4A4-201ENST00000396625 IFNB1P01574 187 aa11.35□□□□□ -0.59
COL4A4-201ENST00000396625 ECE1P42892 770 aa11.35□□□□□ -0.59
COL4A4-201ENST00000396625 PDE4DQ08499 809 aa11.35□□□□□ -0.59
COL4A4-201ENST00000396625 PPP2R5EQ16537 467 aa11.35□□□□□ -0.59
COL4A4-201ENST00000396625 WAPLQ7Z5K2 1190 aa11.35□□□□□ -0.59
COL4A4-201ENST00000396625 SLC52A1Q9NWF4 448 aa11.35□□□□□ -0.59
COL4A4-201ENST00000396625 IPO11Q9UI26 975 aaKnown RBP11.35□□□□□ -0.59
COL4A4-201ENST00000396625 TYW1BQ6NUM6 668 aa11.35□□□□□ -0.59
COL4A4-201ENST00000396625 EFHD1Q9BUP0 239 aa11.35□□□□□ -0.59
COL4A4-201ENST00000396625 TXLNGQ9NUQ3 528 aa11.35□□□□□ -0.59
COL4A4-201ENST00000396625 MAPK8IP1Q9UQF2 711 aa11.35□□□□□ -0.59
COL4A4-201ENST00000396625 NCOA1Q15788 1441 aa11.35□□□□□ -0.59
COL4A4-201ENST00000396625 SMYD2Q9NRG4 433 aa11.35□□□□□ -0.59
COL4A4-201ENST00000396625 PFDN6O15212 129 aa11.35□□□□□ -0.59
COL4A4-201ENST00000396625 NMIQ13287 307 aaPredicted RBP11.35□□□□□ -0.59
COL4A4-201ENST00000396625 CCDC92Q53HC0 331 aaPredicted RBP11.35□□□□□ -0.59
COL4A4-201ENST00000396625 ZNF174Q15697 407 aa11.35□□□□□ -0.59
COL4A4-201ENST00000396625 GFAPP14136 432 aa11.35□□□□□ -0.59
COL4A4-201ENST00000396625 POLE2P56282 527 aa11.35□□□□□ -0.59
COL4A4-201ENST00000396625 NPR1P16066 1061 aa11.35□□□□□ -0.59
COL4A4-201ENST00000396625 RFX1P22670 979 aa11.35□□□□□ -0.59
COL4A4-201ENST00000396625 AK2P54819 239 aa11.35□□□□□ -0.59
COL4A4-201ENST00000396625 GRM1Q13255 1194 aa11.35□□□□□ -0.59
COL4A4-201ENST00000396625 KCNH3Q9ULD8 1083 aa11.35□□□□□ -0.59
COL4A4-201ENST00000396625 ATF7P17544 494 aaPredicted RBP11.35□□□□□ -0.59
COL4A4-201ENST00000396625 IFT88Q13099 833 aa11.35□□□□□ -0.59
COL4A4-201ENST00000396625 JPH2Q9BR39 696 aaPredicted RBP11.35□□□□□ -0.59
COL4A4-201ENST00000396625 ANKRD12Q6UB98 2062 aa11.34□□□□□ -0.59
COL4A4-201ENST00000396625 LMNAP02545 664 aaKnown RBP11.34□□□□□ -0.59
COL4A4-201ENST00000396625 TTC19Q6DKK2 380 aaPredicted RBP11.34□□□□□ -0.59
COL4A4-201ENST00000396625 IFT122Q9HBG6 1241 aa11.34□□□□□ -0.59
COL4A4-201ENST00000396625 GCNT3O95395 438 aa11.34□□□□□ -0.59
COL4A4-201ENST00000396625 SLC9C2Q5TAH2 1124 aa11.34□□□□□ -0.59
COL4A4-201ENST00000396625 TRMT10CQ7L0Y3 403 aaKnown RBP11.34□□□□□ -0.59
COL4A4-201ENST00000396625 NELFBQ8WX92 580 aa11.34□□□□□ -0.59
COL4A4-201ENST00000396625 ATP6V0A1Q93050 837 aa11.34□□□□□ -0.59
COL4A4-201ENST00000396625 DAAM1Q9Y4D1 1078 aa11.34□□□□□ -0.59
COL4A4-201ENST00000396625 CCDC159P0C7I6 412 aa11.34□□□□□ -0.59
COL4A4-201ENST00000396625 FCHSD1Q86WN1 690 aa11.34□□□□□ -0.59
COL4A4-201ENST00000396625 CCDC197Q8NCU1 140 aa11.34□□□□□ -0.59
COL4A4-201ENST00000396625 ZNF277Q9NRM2 450 aaPredicted RBP11.34□□□□□ -0.59
COL4A4-201ENST00000396625 MYO1AQ9UBC5 1043 aa11.34□□□□□ -0.59
COL4A4-201ENST00000396625 KIF21AQ7Z4S6 1674 aa11.34□□□□□ -0.59
COL4A4-201ENST00000396625 PPP1R12AO14974 1030 aaPredicted RBP11.34□□□□□ -0.59
COL4A4-201ENST00000396625 P4HA1P13674 534 aa11.34□□□□□ -0.59
COL4A4-201ENST00000396625 FLOT2Q14254 428 aa11.34□□□□□ -0.59
COL4A4-201ENST00000396625 KIF22Q14807 665 aa11.34□□□□□ -0.59
COL4A4-201ENST00000396625 KRT80Q6KB66 452 aa11.34□□□□□ -0.59
COL4A4-201ENST00000396625 CEP70Q8NHQ1 597 aa11.34□□□□□ -0.59
COL4A4-201ENST00000396625 TTC21BQ7Z4L5 1316 aa11.34□□□□□ -0.59
COL4A4-201ENST00000396625 MTX1Q13505 466 aa11.34□□□□□ -0.59
COL4A4-201ENST00000396625 LETM2Q2VYF4 491 aa11.34□□□□□ -0.59
COL4A4-201ENST00000396625 HELLSQ9NRZ9 838 aa11.34□□□□□ -0.59
COL4A4-201ENST00000396625 TBC1D7Q9P0N9 293 aa11.34□□□□□ -0.59
COL4A4-201ENST00000396625 DEUP1Q05D60 604 aa11.34□□□□□ -0.59
COL4A4-201ENST00000396625 TRIM58Q8NG06 486 aa11.34□□□□□ -0.59
COL4A4-201ENST00000396625 HDAC1Q13547 482 aaPredicted RBP11.33□□□□□ -0.59
COL4A4-201ENST00000396625 C2CD5Q86YS7 1000 aa11.33□□□□□ -0.59
COL4A4-201ENST00000396625 SLF1Q9BQI6 1058 aa11.33□□□□□ -0.59
COL4A4-201ENST00000396625 INTUQ9ULD6 942 aa11.33□□□□□ -0.59
COL4A4-201ENST00000396625 NSD2O96028 1365 aa11.33□□□□□ -0.6
COL4A4-201ENST00000396625 KLHL30Q0D2K2 578 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms