RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 TOP1P11387 765 aaKnown RBP10.88□□□□□ -0.67
CDRT1-204ENST00000395906 ST3GAL1Q11201 340 aa10.88□□□□□ -0.67
CDRT1-204ENST00000395906 IFT88Q13099 833 aa10.88□□□□□ -0.67
CDRT1-204ENST00000395906 KARSQ15046 597 aaKnown RBP10.88□□□□□ -0.67
CDRT1-204ENST00000395906 CCDC38Q502W7 563 aa10.88□□□□□ -0.67
CDRT1-204ENST00000395906 VSTM4Q8IW00 320 aa10.88□□□□□ -0.67
CDRT1-204ENST00000395906 DNAAF2Q9NVR5 837 aaKnown RBP10.88□□□□□ -0.67
CDRT1-204ENST00000395906 CFAP45Q9UL16 551 aa10.88□□□□□ -0.67
CDRT1-204ENST00000395906 NUB1Q9Y5A7 615 aa10.88□□□□□ -0.67
CDRT1-204ENST00000395906 ARHGEF10O15013 1369 aa10.88□□□□□ -0.67
CDRT1-204ENST00000395906 KIF5CO60282 957 aa10.88□□□□□ -0.67
CDRT1-204ENST00000395906 KIF4AO95239 1232 aa10.88□□□□□ -0.67
CDRT1-204ENST00000395906 ATP6V1G2O95670 118 aa10.88□□□□□ -0.67
CDRT1-204ENST00000395906 XRCC4Q13426 336 aa10.88□□□□□ -0.67
CDRT1-204ENST00000395906 C6orf89Q6UWU4 347 aa10.88□□□□□ -0.67
CDRT1-204ENST00000395906 ZNF473Q8WTR7 871 aaKnown RBP10.88□□□□□ -0.67
CDRT1-204ENST00000395906 C17orf50Q8WW18 174 aa10.88□□□□□ -0.67
CDRT1-204ENST00000395906 CUL5Q93034 780 aa10.88□□□□□ -0.67
CDRT1-204ENST00000395906 STAMBPL1Q96FJ0 436 aa10.88□□□□□ -0.67
CDRT1-204ENST00000395906 KIF1AQ12756 1690 aa10.88□□□□□ -0.67
CDRT1-204ENST00000395906 KAT6BQ8WYB5 2073 aa10.88□□□□□ -0.67
CDRT1-204ENST00000395906 ALS2Q96Q42 1657 aa10.87□□□□□ -0.67
CDRT1-204ENST00000395906 CTAGE9A4FU28 777 aa10.87□□□□□ -0.67
CDRT1-204ENST00000395906 SMIM24O75264 130 aa10.87□□□□□ -0.67
CDRT1-204ENST00000395906 CDC37Q16543 378 aaPredicted RBP10.87□□□□□ -0.67
CDRT1-204ENST00000395906 GNPTABQ3T906 1256 aa10.87□□□□□ -0.67
CDRT1-204ENST00000395906 TOM1L2Q6ZVM7 507 aa10.87□□□□□ -0.67
CDRT1-204ENST00000395906 KIAA0825Q8IV33 1275 aa10.87□□□□□ -0.67
CDRT1-204ENST00000395906 APLFQ8IW19 511 aaPredicted RBP10.87□□□□□ -0.67
CDRT1-204ENST00000395906 CCHCR1Q8TD31 782 aa10.87□□□□□ -0.67
CDRT1-204ENST00000395906 TRIM7Q9C029 511 aa10.87□□□□□ -0.67
CDRT1-204ENST00000395906 NOD2Q9HC29 1040 aa10.87□□□□□ -0.67
CDRT1-204ENST00000395906 SALL3Q9BXA9 1300 aa10.87□□□□□ -0.67
CDRT1-204ENST00000395906 UTRNP46939 3433 aa10.87□□□□□ -0.67
CDRT1-204ENST00000395906 ATP4AP20648 1035 aa10.87□□□□□ -0.67
CDRT1-204ENST00000395906 UBASH3AP57075 661 aa10.87□□□□□ -0.67
CDRT1-204ENST00000395906 DEUP1Q05D60 604 aa10.87□□□□□ -0.67
CDRT1-204ENST00000395906 FAM160A1Q05DH4 1040 aa10.87□□□□□ -0.67
CDRT1-204ENST00000395906 PDCLQ13371 301 aa10.87□□□□□ -0.67
CDRT1-204ENST00000395906 ZNF530Q6P9A1 599 aaPredicted RBP10.87□□□□□ -0.67
CDRT1-204ENST00000395906 LARP1Q6PKG0 1096 aaKnown RBP10.87□□□□□ -0.67
CDRT1-204ENST00000395906 FBXW7Q969H0 707 aa10.87□□□□□ -0.67
CDRT1-204ENST00000395906 LTBP4Q8N2S1 1624 aa10.87□□□□□ -0.67
CDRT1-204ENST00000395906 GNAT3A8MTJ3 354 aa10.86□□□□□ -0.67
CDRT1-204ENST00000395906 DTNBO60941 627 aa10.86□□□□□ -0.67
CDRT1-204ENST00000395906 LUC7L3O95232 432 aaKnown RBP10.86□□□□□ -0.67
CDRT1-204ENST00000395906 CCDC175P0C221 793 aa10.86□□□□□ -0.67
CDRT1-204ENST00000395906 EPB41P11171 864 aaKnown RBP10.86□□□□□ -0.67
CDRT1-204ENST00000395906 USP14P54578 494 aa10.86□□□□□ -0.67
CDRT1-204ENST00000395906 RASEFQ8IZ41 740 aa10.86□□□□□ -0.67
CDRT1-204ENST00000395906 NOA1Q8NC60 698 aaKnown RBP10.86□□□□□ -0.67
CDRT1-204ENST00000395906 TBC1D31Q96DN5 1066 aa10.86□□□□□ -0.67
CDRT1-204ENST00000395906 BTG4Q9NY30 223 aa10.86□□□□□ -0.67
CDRT1-204ENST00000395906 ZFATQ9P243 1243 aa10.86□□□□□ -0.67
CDRT1-204ENST00000395906 MYO1AQ9UBC5 1043 aa10.86□□□□□ -0.67
CDRT1-204ENST00000395906 TARSL2A2RTX5 802 aaKnown RBP10.86□□□□□ -0.67
CDRT1-204ENST00000395906 IKBKBO14920 756 aa10.86□□□□□ -0.67
CDRT1-204ENST00000395906 ATP6V1G1O75348 118 aa10.86□□□□□ -0.67
CDRT1-204ENST00000395906 ANP32DO95626 131 aa10.86□□□□□ -0.67
CDRT1-204ENST00000395906 SCNN1BP51168 640 aa10.86□□□□□ -0.67
CDRT1-204ENST00000395906 EVA1CP58658 441 aa10.86□□□□□ -0.67
CDRT1-204ENST00000395906 AKAP17AQ02040 695 aaKnown RBP10.86□□□□□ -0.67
CDRT1-204ENST00000395906 GOLGA8FQ08AF8 430 aa10.86□□□□□ -0.67
CDRT1-204ENST00000395906 GOLGA8DPQ0D2H9 430 aa10.86□□□□□ -0.67
CDRT1-204ENST00000395906 NCAPHQ15003 741 aa10.86□□□□□ -0.67
CDRT1-204ENST00000395906 ENGASEQ8NFI3 743 aa10.86□□□□□ -0.67
CDRT1-204ENST00000395906 ZNF570Q96NI8 536 aa10.86□□□□□ -0.67
CDRT1-204ENST00000395906 GOLPH3LQ9H4A5 285 aa10.86□□□□□ -0.67
CDRT1-204ENST00000395906 MAGEA10P43363 369 aaPredicted RBP10.85□□□□□ -0.67
CDRT1-204ENST00000395906 CTCFP49711 727 aaPredicted RBP10.85□□□□□ -0.67
CDRT1-204ENST00000395906 MKRN4PQ13434 485 aaPredicted RBP10.85□□□□□ -0.67
CDRT1-204ENST00000395906 DPCR1Q3MIW9 517 aa10.85□□□□□ -0.67
CDRT1-204ENST00000395906 TSPYL2Q9H2G4 693 aaPredicted RBP10.85□□□□□ -0.67
CDRT1-204ENST00000395906 MRPL44Q9H9J2 332 aaKnown RBP10.85□□□□□ -0.67
CDRT1-204ENST00000395906 RGPD1P0DJD0 1748 aa10.85□□□□□ -0.67
CDRT1-204ENST00000395906 SLIT3O75094 1523 aa10.85□□□□□ -0.67
CDRT1-204ENST00000395906 SRRM3A6NNA2 597 aaPredicted RBP10.85□□□□□ -0.67
CDRT1-204ENST00000395906 KCNQ3O43525 872 aa10.85□□□□□ -0.67
CDRT1-204ENST00000395906 CREB3O43889 395 aa10.85□□□□□ -0.67
CDRT1-204ENST00000395906 LSP1P33241 339 aa10.85□□□□□ -0.67
CDRT1-204ENST00000395906 NECAB1Q8N987 351 aa10.85□□□□□ -0.67
CDRT1-204ENST00000395906 AGAP3Q96P47 875 aa10.85□□□□□ -0.67
CDRT1-204ENST00000395906 SELENOOQ9BVL4 669 aa10.85□□□□□ -0.67
CDRT1-204ENST00000395906 TSPYL4Q9UJ04 414 aa10.85□□□□□ -0.67
CDRT1-204ENST00000395906 ROBO1Q9Y6N7 1651 aa10.85□□□□□ -0.67
CDRT1-204ENST00000395906 TOM1O60784 492 aa10.84□□□□□ -0.67
CDRT1-204ENST00000395906 DNAJC8O75937 253 aaPredicted RBP10.84□□□□□ -0.67
CDRT1-204ENST00000395906 MAP4K4O95819 1239 aaPredicted RBP10.84□□□□□ -0.67
CDRT1-204ENST00000395906 SERPINC1P01008 464 aa10.84□□□□□ -0.67
CDRT1-204ENST00000395906 CPA1P15085 419 aa10.84□□□□□ -0.67
CDRT1-204ENST00000395906 ZNF24P17028 368 aa10.84□□□□□ -0.67
CDRT1-204ENST00000395906 LMOD1P29536 600 aaPredicted RBP10.84□□□□□ -0.67
CDRT1-204ENST00000395906 DYNC1I2Q13409 638 aaKnown RBP10.84□□□□□ -0.67
CDRT1-204ENST00000395906 TWISTNBQ3B726 338 aaPredicted RBP10.84□□□□□ -0.67
CDRT1-204ENST00000395906 CFAP100Q494V2 611 aa10.84□□□□□ -0.67
CDRT1-204ENST00000395906 ANKRD20A8PQ5CZ79 823 aa10.84□□□□□ -0.67
CDRT1-204ENST00000395906 SPECC1Q5M775 1068 aa10.84□□□□□ -0.67
CDRT1-204ENST00000395906 TSHZ3Q63HK5 1081 aa10.84□□□□□ -0.67
CDRT1-204ENST00000395906 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.84□□□□□ -0.67
CDRT1-204ENST00000395906 FAM114A1Q8IWE2 563 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms