RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 TERF1P54274 439 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 RASA3Q14644 834 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 ADALQ6DHV7 355 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 NLRX1Q86UT6 975 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 C10orf67Q8IYJ2 551 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 AFAP1L1Q8TED9 768 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 RSRC1Q96IZ7 334 aaKnown RBP6.05□□□□□ -1.44
VPS13C-204ENST00000395898 STK32BQ9NY57 414 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 PCDHA12Q9UN75 941 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 CD2APQ9Y5K6 639 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 FANCCQ00597 558 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 ARHGAP24Q8N264 748 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 PPFIBP2Q8ND30 876 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 CHURC1Q8WUH1 139 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 FAM227BQ96M60 508 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 DBNDD2Q9BQY9 259 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 JAG2Q9Y219 1238 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 CHMP2AO43633 222 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 VIMP08670 466 aaKnown RBP6.05□□□□□ -1.44
VPS13C-204ENST00000395898 TTC31Q49AM3 519 aaPredicted RBP6.05□□□□□ -1.44
VPS13C-204ENST00000395898 TRIM58Q8NG06 486 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 NACA2Q9H009 215 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 SPC25Q9HBM1 224 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 CIB2O75838 187 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 MTMR3Q13615 1198 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 UAP1Q16222 522 aaPredicted RBP6.05□□□□□ -1.44
VPS13C-204ENST00000395898 SDCCAG8Q86SQ7 713 aaPredicted RBP6.05□□□□□ -1.44
VPS13C-204ENST00000395898 HAUS1Q96CS2 278 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 PCDHB13Q9Y5F0 798 aa6.05□□□□□ -1.44
VPS13C-204ENST00000395898 E7EWF7 191 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 CACNA2D3Q8IZS8 1091 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 ZBTB38Q8NAP3 1195 aaPredicted RBP6.04□□□□□ -1.44
VPS13C-204ENST00000395898 CCDC51Q96ER9 411 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 CCDC87Q9NVE4 849 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.04□□□□□ -1.44
VPS13C-204ENST00000395898 USH1CQ9Y6N9 552 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 PRPF6O94906 941 aaKnown RBP6.04□□□□□ -1.44
VPS13C-204ENST00000395898 NCAPH2Q6IBW4 605 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 CEP57Q86XR8 500 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 CCDC89Q8N998 374 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 RTEL1Q9NZ71 1219 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 STAT1P42224 750 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 KRT26Q7Z3Y9 468 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 MIS12Q9H081 205 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 VCX3BQ9H321 246 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 ZNF277Q9NRM2 450 aaPredicted RBP6.04□□□□□ -1.44
VPS13C-204ENST00000395898 TRIM35Q9UPQ4 493 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 H7C1D1 291 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 KLHL30Q0D2K2 578 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 USH1GQ495M9 461 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 LARGE2Q8N3Y3 721 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 BIN2Q9UBW5 565 aaPredicted RBP6.04□□□□□ -1.44
VPS13C-204ENST00000395898 NEURL1BA8MQ27 555 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 EXOC3O60645 756 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 ZNF710Q8N1W2 664 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 EPSTI1Q96J88 318 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 MAPK8IP1Q9UQF2 711 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 BLMP54132 1417 aaPredicted RBP6.04□□□□□ -1.44
VPS13C-204ENST00000395898 MYCLP12524 364 aaPredicted RBP6.04□□□□□ -1.44
VPS13C-204ENST00000395898 ABCD1P33897 745 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 PPFIA1Q13136 1202 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 PAK2Q13177 524 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 DENND2CQ68D51 928 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 PPP1R21Q6ZMI0 780 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 RIOK1Q9BRS2 568 aaKnown RBP6.04□□□□□ -1.44
VPS13C-204ENST00000395898 MYOM2P54296 1465 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 GBP1P32455 592 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 SARNPP82979 210 aaKnown RBP6.04□□□□□ -1.44
VPS13C-204ENST00000395898 NEDD9Q14511 834 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 KMT5BQ4FZB7 885 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 GSDMBQ8TAX9 411 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 PHKBQ93100 1093 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 TRERF1Q96PN7 1200 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 ATP8A2Q9NTI2 1148 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 MED23Q9ULK4 1368 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 PNMA6EA0A0J9YXQ4 647 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 RBM6P78332 1123 aaKnown RBP6.04□□□□□ -1.44
VPS13C-204ENST00000395898 UTP14CQ5TAP6 766 aaKnown RBP6.04□□□□□ -1.44
VPS13C-204ENST00000395898 CCDC62Q6P9F0 684 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 NIM1KQ8IY84 436 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 NELFBQ8WX92 580 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 GTF3C6Q969F1 213 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 ATP10DQ9P241 1426 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 DNAJC21Q5F1R6 531 aaKnown RBP6.04□□□□□ -1.44
VPS13C-204ENST00000395898 CABP7Q86V35 215 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 TRIML1Q8N9V2 468 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 SLC17A8Q8NDX2 589 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 VCXQ9H320 206 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 KDRP35968 1356 aa6.04□□□□□ -1.44
VPS13C-204ENST00000395898 TAF5LO75529 589 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 HARSP12081 509 aaKnown RBP6.03□□□□□ -1.44
VPS13C-204ENST00000395898 SFMBT2Q5VUG0 894 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 G2E3Q7L622 706 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 PEX26Q7Z412 305 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 ASIC3Q9UHC3 531 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 BCAP29Q9UHQ4 241 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 H0YCG3 227 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 CFBP00751 764 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 ARHGAP25P42331 645 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 RPS6KA1Q15418 735 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms