RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 ZSWIM2Q8NEG5 633 aa7.19□□□□□ -1.26
HMGB1P10-201ENST00000395823 SLKQ9H2G2 1235 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P10-201ENST00000395823 ATXN3LQ9H3M9 355 aa7.19□□□□□ -1.26
HMGB1P10-201ENST00000395823 FAM229AH3BQW9 127 aa7.18□□□□□ -1.26
HMGB1P10-201ENST00000395823 CBFA2T2O43439 604 aa7.18□□□□□ -1.26
HMGB1P10-201ENST00000395823 CST3P01034 146 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P10-201ENST00000395823 SNRPNP63162 240 aaKnown RBP7.18□□□□□ -1.26
HMGB1P10-201ENST00000395823 SOX4Q06945 474 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P10-201ENST00000395823 TCEA2Q15560 299 aa7.18□□□□□ -1.26
HMGB1P10-201ENST00000395823 AXDND1Q5T1B0 1012 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P10-201ENST00000395823 LCE2AQ5TA79 106 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P10-201ENST00000395823 NUTM2GQ5VZR2 741 aa7.18□□□□□ -1.26
HMGB1P10-201ENST00000395823 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.18□□□□□ -1.26
HMGB1P10-201ENST00000395823 ZNF513Q8N8E2 541 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P10-201ENST00000395823 C2CD4AQ8NCU7 369 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P10-201ENST00000395823 ZCRB1Q8TBF4 217 aaKnown RBP7.18□□□□□ -1.26
HMGB1P10-201ENST00000395823 DCAF11Q8TEB1 546 aa7.18□□□□□ -1.26
HMGB1P10-201ENST00000395823 PPP1R13LQ8WUF5 828 aa7.18□□□□□ -1.26
HMGB1P10-201ENST00000395823 KLHL25Q9H0H3 589 aa7.18□□□□□ -1.26
HMGB1P10-201ENST00000395823 RNF208Q9H0X6 261 aa7.18□□□□□ -1.26
HMGB1P10-201ENST00000395823 ARHGEF4Q9NR80 690 aa7.18□□□□□ -1.26
HMGB1P10-201ENST00000395823 ACTL7BQ9Y614 415 aa7.18□□□□□ -1.26
HMGB1P10-201ENST00000395823 COL17A1Q9UMD9 1497 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P10-201ENST00000395823 A0A1W2PQU0 124 aa7.17□□□□□ -1.26
HMGB1P10-201ENST00000395823 TP53P04637 393 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P10-201ENST00000395823 EPHX1P07099 455 aa7.17□□□□□ -1.26
HMGB1P10-201ENST00000395823 VIL1P09327 827 aaKnown RBP7.17□□□□□ -1.26
HMGB1P10-201ENST00000395823 RAC1P63000 192 aa7.17□□□□□ -1.26
HMGB1P10-201ENST00000395823 CBX2Q14781 532 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P10-201ENST00000395823 C21orf62-AS1Q17RA5 79 aa7.17□□□□□ -1.26
HMGB1P10-201ENST00000395823 LONRF2Q1L5Z9 754 aa7.17□□□□□ -1.26
HMGB1P10-201ENST00000395823 BBS9Q3SYG4 887 aa7.17□□□□□ -1.26
HMGB1P10-201ENST00000395823 ZNF385CQ66K41 422 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P10-201ENST00000395823 CYB5D2Q8WUJ1 264 aa7.17□□□□□ -1.26
HMGB1P10-201ENST00000395823 SGSM3Q96HU1 749 aa7.17□□□□□ -1.26
HMGB1P10-201ENST00000395823 EXOC2Q96KP1 924 aa7.17□□□□□ -1.26
HMGB1P10-201ENST00000395823 DHRS1Q96LJ7 313 aa7.17□□□□□ -1.26
HMGB1P10-201ENST00000395823 CCDC74BQ96LY2 380 aa7.17□□□□□ -1.26
HMGB1P10-201ENST00000395823 HAUS7Q99871 368 aa7.17□□□□□ -1.26
HMGB1P10-201ENST00000395823 LGR4Q9BXB1 951 aa7.17□□□□□ -1.26
HMGB1P10-201ENST00000395823 FAM105AQ9NUU6 356 aa7.17□□□□□ -1.26
HMGB1P10-201ENST00000395823 APEX2Q9UBZ4 518 aa7.17□□□□□ -1.26
HMGB1P10-201ENST00000395823 CAPNS1P04632 268 aa7.16□□□□□ -1.26
HMGB1P10-201ENST00000395823 IBSPP21815 317 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P10-201ENST00000395823 YOD1Q5VVQ6 348 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P10-201ENST00000395823 DYMQ7RTS9 669 aa7.16□□□□□ -1.26
HMGB1P10-201ENST00000395823 LRRC47Q8N1G4 583 aaKnown RBP7.16□□□□□ -1.26
HMGB1P10-201ENST00000395823 AGGF1Q8N302 714 aaeCLIP7.16□□□□□ -1.26
HMGB1P10-201ENST00000395823 SYNPOQ8N3V7 929 aa7.16□□□□□ -1.26
HMGB1P10-201ENST00000395823 DNAJB8Q8NHS0 232 aa7.16□□□□□ -1.26
HMGB1P10-201ENST00000395823 KISS1RQ969F8 398 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P10-201ENST00000395823 ZNF512BQ96KM6 892 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P10-201ENST00000395823 SLC26A8Q96RN1 970 aa7.16□□□□□ -1.26
HMGB1P10-201ENST00000395823 RRAGCQ9HB90 399 aa7.16□□□□□ -1.26
HMGB1P10-201ENST00000395823 CYP4F12Q9HCS2 524 aa7.16□□□□□ -1.26
HMGB1P10-201ENST00000395823 ANKRD34BA5PLL1 514 aa7.15□□□□□ -1.26
HMGB1P10-201ENST00000395823 IQCA1LA6NCM1 817 aa7.15□□□□□ -1.26
HMGB1P10-201ENST00000395823 RBAK-RBAKDNI3L0D1 243 aa7.15□□□□□ -1.26
HMGB1P10-201ENST00000395823 L1CAMP32004 1257 aa7.15□□□□□ -1.26
HMGB1P10-201ENST00000395823 ZNF143P52747 638 aaPredicted RBP7.15□□□□□ -1.26
HMGB1P10-201ENST00000395823 ANAPC15P60006 121 aa7.15□□□□□ -1.26
HMGB1P10-201ENST00000395823 DCAF15Q66K64 600 aa7.15□□□□□ -1.26
HMGB1P10-201ENST00000395823 ARMCX6Q7L4S7 300 aa7.15□□□□□ -1.26
HMGB1P10-201ENST00000395823 KCT2Q8NC54 265 aa7.15□□□□□ -1.26
HMGB1P10-201ENST00000395823 XAGE3Q8WTP9 111 aa7.15□□□□□ -1.26
HMGB1P10-201ENST00000395823 PLVAPQ9BX97 442 aa7.15□□□□□ -1.26
HMGB1P10-201ENST00000395823 KRBA1A5PL33 1030 aa7.14□□□□□ -1.27
HMGB1P10-201ENST00000395823 SHOXO15266 292 aa7.14□□□□□ -1.27
HMGB1P10-201ENST00000395823 CLEC3AO75596 197 aa7.14□□□□□ -1.27
HMGB1P10-201ENST00000395823 GBP1P32455 592 aa7.14□□□□□ -1.27
HMGB1P10-201ENST00000395823 ASPAP45381 313 aa7.14□□□□□ -1.27
HMGB1P10-201ENST00000395823 SV2CQ496J9 727 aa7.14□□□□□ -1.27
HMGB1P10-201ENST00000395823 TM4SF20Q53R12 229 aa7.14□□□□□ -1.27
HMGB1P10-201ENST00000395823 FAM209AQ5JX71 171 aa7.14□□□□□ -1.27
HMGB1P10-201ENST00000395823 IGF2-ASQ6U949 168 aa7.14□□□□□ -1.27
HMGB1P10-201ENST00000395823 CDC37L1Q7L3B6 337 aa7.14□□□□□ -1.27
HMGB1P10-201ENST00000395823 ZNF227Q86WZ6 799 aa7.14□□□□□ -1.27
HMGB1P10-201ENST00000395823 SMYD4Q8IYR2 804 aaPredicted RBP7.14□□□□□ -1.27
HMGB1P10-201ENST00000395823 C12orf50Q8NA57 414 aaPredicted RBP7.14□□□□□ -1.27
HMGB1P10-201ENST00000395823 STAG1Q8WVM7 1258 aa7.14□□□□□ -1.27
HMGB1P10-201ENST00000395823 FGD4Q96M96 766 aa7.14□□□□□ -1.27
HMGB1P10-201ENST00000395823 FOXQ1Q9C009 403 aa7.14□□□□□ -1.27
HMGB1P10-201ENST00000395823 MRPL18Q9H0U6 180 aaKnown RBP7.14□□□□□ -1.27
HMGB1P10-201ENST00000395823 TMX1Q9H3N1 280 aa7.14□□□□□ -1.27
HMGB1P10-201ENST00000395823 PLAAQ9Y263 795 aa7.14□□□□□ -1.27
HMGB1P10-201ENST00000395823 F8W735 103 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P10-201ENST00000395823 TBX1O43435 398 aa7.13□□□□□ -1.27
HMGB1P10-201ENST00000395823 RNGTTO60942 597 aaKnown RBP7.13□□□□□ -1.27
HMGB1P10-201ENST00000395823 ARHGEF15O94989 841 aa7.13□□□□□ -1.27
HMGB1P10-201ENST00000395823 ITGAVP06756 1048 aa7.13□□□□□ -1.27
HMGB1P10-201ENST00000395823 ELNP15502 786 aa7.13□□□□□ -1.27
HMGB1P10-201ENST00000395823 POU3F3P20264 500 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P10-201ENST00000395823 PREPP48147 710 aa7.13□□□□□ -1.27
HMGB1P10-201ENST00000395823 PPP2R2AP63151 447 aa7.13□□□□□ -1.27
HMGB1P10-201ENST00000395823 ZC3H12BQ5HYM0 836 aaKnown RBP7.13□□□□□ -1.27
HMGB1P10-201ENST00000395823 SHISA2Q6UWI4 295 aa7.13□□□□□ -1.27
HMGB1P10-201ENST00000395823 NEDD1Q8NHV4 660 aa7.13□□□□□ -1.27
HMGB1P10-201ENST00000395823 VWCEQ96DN2 955 aa7.13□□□□□ -1.27
HMGB1P10-201ENST00000395823 FAM126AQ9BYI3 521 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P10-201ENST00000395823 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms