RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 ZMYM6O95789 1325 aa19.69■□□□□ 0.74
CXCL1-201ENST00000395761 RAD50Q92878 1312 aa19.69■□□□□ 0.74
CXCL1-201ENST00000395761 USP17L10C9JJH3 530 aa19.68■□□□□ 0.74
CXCL1-201ENST00000395761 PTH1RQ03431 593 aa19.68■□□□□ 0.74
CXCL1-201ENST00000395761 PDE4BQ07343 736 aa19.68■□□□□ 0.74
CXCL1-201ENST00000395761 TAF1CQ15572 869 aaPredicted RBP19.68■□□□□ 0.74
CXCL1-201ENST00000395761 TREML2Q5T2D2 321 aa19.68■□□□□ 0.74
CXCL1-201ENST00000395761 ZNF444Q8N0Y2 327 aaPredicted RBP19.68■□□□□ 0.74
CXCL1-201ENST00000395761 CFHR5Q9BXR6 569 aa19.68■□□□□ 0.74
CXCL1-201ENST00000395761 NBPF3Q9H094 633 aa19.68■□□□□ 0.74
CXCL1-201ENST00000395761 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.68■□□□□ 0.74
CXCL1-201ENST00000395761 A0A1W2PRG0 241 aa19.67■□□□□ 0.74
CXCL1-201ENST00000395761 C19orf81C9J6K1 198 aa19.67■□□□□ 0.74
CXCL1-201ENST00000395761 ZYXQ15942 572 aaKnown RBP19.67■□□□□ 0.74
CXCL1-201ENST00000395761 FAM47AQ5JRC9 791 aa19.67■□□□□ 0.74
CXCL1-201ENST00000395761 ZNF287Q9HBT7 754 aa19.67■□□□□ 0.74
CXCL1-201ENST00000395761 EMILIN3Q9NT22 766 aa19.67■□□□□ 0.74
CXCL1-201ENST00000395761 PROCA1Q8NCQ7 364 aaPredicted RBP19.66■□□□□ 0.74
CXCL1-201ENST00000395761 FEZ1Q99689 392 aa19.66■□□□□ 0.74
CXCL1-201ENST00000395761 ZCCHC17Q9NP64 241 aaKnown RBP19.66■□□□□ 0.74
CXCL1-201ENST00000395761 AGTPBP1Q9UPW5 1226 aa19.66■□□□□ 0.74
CXCL1-201ENST00000395761 PTPRFP10586 1907 aa19.66■□□□□ 0.74
CXCL1-201ENST00000395761 MYH8P13535 1937 aa19.65■□□□□ 0.74
CXCL1-201ENST00000395761 GPR25O00155 361 aa19.65■□□□□ 0.74
CXCL1-201ENST00000395761 FGRP09769 529 aa19.65■□□□□ 0.74
CXCL1-201ENST00000395761 CYP2C8P10632 490 aa19.65■□□□□ 0.74
CXCL1-201ENST00000395761 EEF2P13639 858 aaKnown RBP19.65■□□□□ 0.74
CXCL1-201ENST00000395761 ICA1Q05084 483 aa19.65■□□□□ 0.74
CXCL1-201ENST00000395761 USP17L2Q6R6M4 530 aa19.65■□□□□ 0.74
CXCL1-201ENST00000395761 TBC1D10CQ8IV04 446 aa19.65■□□□□ 0.74
CXCL1-201ENST00000395761 ESYT1Q9BSJ8 1104 aa19.65■□□□□ 0.74
CXCL1-201ENST00000395761 KIAA1683Q9H0B3 1180 aa19.65■□□□□ 0.74
CXCL1-201ENST00000395761 KANSL2Q9H9L4 492 aa19.65■□□□□ 0.74
CXCL1-201ENST00000395761 ZFYVE28Q9HCC9 887 aa19.65■□□□□ 0.74
CXCL1-201ENST00000395761 TMOD4Q9NZQ9 345 aa19.65■□□□□ 0.74
CXCL1-201ENST00000395761 IGKV6D-41A0A0C4DH26 115 aa19.64■□□□□ 0.73
CXCL1-201ENST00000395761 ZNF213O14771 459 aa19.64■□□□□ 0.73
CXCL1-201ENST00000395761 TFAP4Q01664 338 aa19.64■□□□□ 0.73
CXCL1-201ENST00000395761 NKX2-3Q8TAU0 364 aa19.64■□□□□ 0.73
CXCL1-201ENST00000395761 PRDM10Q9NQV6 1147 aa19.64■□□□□ 0.73
CXCL1-201ENST00000395761 ORC4O43929 436 aa19.63■□□□□ 0.73
CXCL1-201ENST00000395761 CDC45O75419 566 aa19.63■□□□□ 0.73
CXCL1-201ENST00000395761 TSPY3P0CV98 308 aa19.63■□□□□ 0.73
CXCL1-201ENST00000395761 TSPY8P0CW00 308 aa19.63■□□□□ 0.73
CXCL1-201ENST00000395761 ATP2B2Q01814 1243 aa19.63■□□□□ 0.73
CXCL1-201ENST00000395761 KIAA1755Q5JYT7 1200 aa19.63■□□□□ 0.73
CXCL1-201ENST00000395761 AKNAD1Q5T1N1 836 aa19.63■□□□□ 0.73
CXCL1-201ENST00000395761 NEDD1Q8NHV4 660 aa19.63■□□□□ 0.73
CXCL1-201ENST00000395761 ZNF296Q8WUU4 475 aaPredicted RBP19.63■□□□□ 0.73
CXCL1-201ENST00000395761 TOMM22Q9NS69 142 aa19.63■□□□□ 0.73
CXCL1-201ENST00000395761 CTNNA3Q9UI47 895 aa19.63■□□□□ 0.73
CXCL1-201ENST00000395761 SLC45A1Q9Y2W3 748 aa19.63■□□□□ 0.73
CXCL1-201ENST00000395761 RANBP6O60518 1105 aaKnown RBP19.62■□□□□ 0.73
CXCL1-201ENST00000395761 TLR2O60603 784 aa19.62■□□□□ 0.73
CXCL1-201ENST00000395761 USP14P54578 494 aa19.62■□□□□ 0.73
CXCL1-201ENST00000395761 IMMTQ16891 758 aaKnown RBP19.62■□□□□ 0.73
CXCL1-201ENST00000395761 RRP12Q5JTH9 1297 aaKnown RBP19.62■□□□□ 0.73
CXCL1-201ENST00000395761 MFSD6Q6ZSS7 791 aa19.62■□□□□ 0.73
CXCL1-201ENST00000395761 STAG1Q8WVM7 1258 aa19.62■□□□□ 0.73
CXCL1-201ENST00000395761 ARHGEF10LQ9HCE6 1279 aa19.62■□□□□ 0.73
CXCL1-201ENST00000395761 TMX2Q9Y320 296 aa19.62■□□□□ 0.73
CXCL1-201ENST00000395761 LOC285556D6RIA3 1793 aa19.62■□□□□ 0.73
CXCL1-201ENST00000395761 ADGRA2Q96PE1 1338 aa19.61■□□□□ 0.73
CXCL1-201ENST00000395761 NOM1Q5C9Z4 860 aaKnown RBP19.61■□□□□ 0.73
CXCL1-201ENST00000395761 COL13A1Q5TAT6 717 aaPredicted RBP19.61■□□□□ 0.73
CXCL1-201ENST00000395761 MAP4K1Q92918 833 aa19.61■□□□□ 0.73
CXCL1-201ENST00000395761 CEP95Q96GE4 821 aa19.61■□□□□ 0.73
CXCL1-201ENST00000395761 C12orf42Q96LP6 360 aa19.61■□□□□ 0.73
CXCL1-201ENST00000395761 PARK7Q99497 189 aaKnown RBP19.61■□□□□ 0.73
CXCL1-201ENST00000395761 LSG1Q9H089 658 aaKnown RBP19.61■□□□□ 0.73
CXCL1-201ENST00000395761 ASCC2Q9H1I8 757 aaPredicted RBP19.61■□□□□ 0.73
CXCL1-201ENST00000395761 IL17RBQ9NRM6 502 aa19.61■□□□□ 0.73
CXCL1-201ENST00000395761 MTMR4Q9NYA4 1195 aa19.61■□□□□ 0.73
CXCL1-201ENST00000395761 CPA4Q9UI42 421 aa19.61■□□□□ 0.73
CXCL1-201ENST00000395761 GREB1LQ9C091 1923 aaPredicted RBP19.61■□□□□ 0.73
CXCL1-201ENST00000395761 PLIN4Q96Q06 1357 aa19.6■□□□□ 0.73
CXCL1-201ENST00000395761 NEDD4P46934 1319 aa19.6■□□□□ 0.73
CXCL1-201ENST00000395761 TSPY2A6NKD2 308 aa19.6■□□□□ 0.73
CXCL1-201ENST00000395761 NMT2O60551 498 aa19.6■□□□□ 0.73
CXCL1-201ENST00000395761 FKTNO75072 461 aa19.6■□□□□ 0.73
CXCL1-201ENST00000395761 VCAM1P19320 739 aa19.6■□□□□ 0.73
CXCL1-201ENST00000395761 HOXA7P31268 230 aaPredicted RBP19.6■□□□□ 0.73
CXCL1-201ENST00000395761 KIAA1211Q6ZU35 1233 aa19.6■□□□□ 0.73
CXCL1-201ENST00000395761 NYAP2Q9P242 653 aa19.6■□□□□ 0.73
CXCL1-201ENST00000395761 CLIP2Q9UDT6 1046 aa19.6■□□□□ 0.73
CXCL1-201ENST00000395761 U3KPZ7 1027 aaPredicted RBP19.6■□□□□ 0.73
CXCL1-201ENST00000395761 OSBPP22059 807 aa19.59■□□□□ 0.73
CXCL1-201ENST00000395761 PABPC4Q13310 644 aaKnown RBP eCLIP19.59■□□□□ 0.73
CXCL1-201ENST00000395761 C17orf99Q6UX52 265 aa19.59■□□□□ 0.73
CXCL1-201ENST00000395761 SPICE1Q8N0Z3 855 aa19.59■□□□□ 0.73
CXCL1-201ENST00000395761 P2RX7Q99572 595 aaKnown RBP19.59■□□□□ 0.73
CXCL1-201ENST00000395761 RNF41Q9H4P4 317 aaPredicted RBP19.59■□□□□ 0.73
CXCL1-201ENST00000395761 VCPKMTQ9H867 229 aa19.59■□□□□ 0.73
CXCL1-201ENST00000395761 CASP8AP2Q9UKL3 1982 aa19.59■□□□□ 0.73
CXCL1-201ENST00000395761 CYP21A2P08686 494 aa19.58■□□□□ 0.72
CXCL1-201ENST00000395761 CAP1Q01518 475 aa19.58■□□□□ 0.72
CXCL1-201ENST00000395761 SP3Q02447 781 aa19.58■□□□□ 0.72
CXCL1-201ENST00000395761 CASC1Q6TDU7 716 aa19.58■□□□□ 0.72
CXCL1-201ENST00000395761 RPAP3Q9H6T3 665 aaPredicted RBP19.58■□□□□ 0.72
CXCL1-201ENST00000395761 SH2D4AQ9H788 454 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms