RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 H3BRB1 525 aa7.99□□□□□ -1.13
AP3S1-202ENST00000395548 TRPA1O75762 1119 aa7.99□□□□□ -1.13
AP3S1-202ENST00000395548 NEFLP07196 543 aa7.99□□□□□ -1.13
AP3S1-202ENST00000395548 SERPINB4P48594 390 aa7.99□□□□□ -1.13
AP3S1-202ENST00000395548 TGFB2P61812 414 aa7.99□□□□□ -1.13
AP3S1-202ENST00000395548 ZKSCAN3Q9BRR0 538 aa7.99□□□□□ -1.13
AP3S1-202ENST00000395548 TUT1Q9H6E5 874 aaKnown RBP7.99□□□□□ -1.13
AP3S1-202ENST00000395548 KCNK4Q9NYG8 393 aa7.99□□□□□ -1.13
AP3S1-202ENST00000395548 SOX13Q9UN79 622 aa7.99□□□□□ -1.13
AP3S1-202ENST00000395548 TM4SF5O14894 197 aa7.98□□□□□ -1.13
AP3S1-202ENST00000395548 WISP1O95388 367 aa7.98□□□□□ -1.13
AP3S1-202ENST00000395548 NUTM2GQ5VZR2 741 aa7.98□□□□□ -1.13
AP3S1-202ENST00000395548 HHIPQ96QV1 700 aa7.98□□□□□ -1.13
AP3S1-202ENST00000395548 WDR17Q8IZU2 1322 aa7.98□□□□□ -1.13
AP3S1-202ENST00000395548 GLTPD2A6NH11 291 aa7.97□□□□□ -1.13
AP3S1-202ENST00000395548 NDUFB5O43674 189 aa7.97□□□□□ -1.13
AP3S1-202ENST00000395548 GCP02774 474 aa7.97□□□□□ -1.13
AP3S1-202ENST00000395548 C19orf57Q0VDD7 668 aa7.97□□□□□ -1.13
AP3S1-202ENST00000395548 UVSSAQ2YD98 709 aa7.97□□□□□ -1.13
AP3S1-202ENST00000395548 KIAA1211Q6ZU35 1233 aa7.97□□□□□ -1.13
AP3S1-202ENST00000395548 RETREG2Q8NC44 543 aa7.97□□□□□ -1.13
AP3S1-202ENST00000395548 SLC7A3Q8WY07 619 aa7.97□□□□□ -1.13
AP3S1-202ENST00000395548 KNDC1Q76NI1 1749 aa7.97□□□□□ -1.13
AP3S1-202ENST00000395548 DDX3YO15523 660 aaKnown RBP7.96□□□□□ -1.14
AP3S1-202ENST00000395548 EIF4EBP3O60516 100 aaPredicted RBP7.96□□□□□ -1.14
AP3S1-202ENST00000395548 IKBKEQ14164 716 aa7.96□□□□□ -1.14
AP3S1-202ENST00000395548 TMEM132EQ6IEE7 984 aa7.96□□□□□ -1.14
AP3S1-202ENST00000395548 CCER1Q8TC90 406 aaPredicted RBP7.96□□□□□ -1.14
AP3S1-202ENST00000395548 ASAP3Q8TDY4 903 aa7.96□□□□□ -1.14
AP3S1-202ENST00000395548 FOXD4L4Q8WXT5 416 aaPredicted RBP7.96□□□□□ -1.14
AP3S1-202ENST00000395548 CITED4Q96RK1 184 aa7.96□□□□□ -1.14
AP3S1-202ENST00000395548 UBL7Q96S82 380 aaPredicted RBP7.96□□□□□ -1.14
AP3S1-202ENST00000395548 BHLHE41Q9C0J9 482 aaPredicted RBP7.96□□□□□ -1.14
AP3S1-202ENST00000395548 RAXQ9Y2V3 346 aa7.96□□□□□ -1.14
AP3S1-202ENST00000395548 YTHDC2Q9H6S0 1430 aaKnown RBP7.95□□□□□ -1.14
AP3S1-202ENST00000395548 BTAF1O14981 1849 aa7.95□□□□□ -1.14
AP3S1-202ENST00000395548 TUBGCP6Q96RT7 1819 aa7.95□□□□□ -1.14
AP3S1-202ENST00000395548 DHX15O43143 795 aaKnown RBP7.95□□□□□ -1.14
AP3S1-202ENST00000395548 ADAM11O75078 769 aa7.95□□□□□ -1.14
AP3S1-202ENST00000395548 FXR1P51114 621 aaKnown RBP eCLIP7.95□□□□□ -1.14
AP3S1-202ENST00000395548 SOX10P56693 466 aa7.95□□□□□ -1.14
AP3S1-202ENST00000395548 DEFB115Q30KQ5 88 aa7.95□□□□□ -1.14
AP3S1-202ENST00000395548 ARTNQ5T4W7 220 aa7.95□□□□□ -1.14
AP3S1-202ENST00000395548 RNF208Q9H0X6 261 aa7.95□□□□□ -1.14
AP3S1-202ENST00000395548 ZFP64Q9NPA5 681 aa7.95□□□□□ -1.14
AP3S1-202ENST00000395548 STOML1Q9UBI4 398 aa7.95□□□□□ -1.14
AP3S1-202ENST00000395548 CCNL1Q9UK58 526 aaPredicted RBP7.95□□□□□ -1.14
AP3S1-202ENST00000395548 PIK3C2AO00443 1686 aa7.95□□□□□ -1.14
AP3S1-202ENST00000395548 PKD1L3Q7Z443 1732 aa7.95□□□□□ -1.14
AP3S1-202ENST00000395548 KIF1BO60333 1816 aa7.94□□□□□ -1.14
AP3S1-202ENST00000395548 CUL9Q8IWT3 2517 aa7.94□□□□□ -1.14
AP3S1-202ENST00000395548 SOX1O00570 391 aaPredicted RBP7.94□□□□□ -1.14
AP3S1-202ENST00000395548 GSC2O15499 205 aa7.94□□□□□ -1.14
AP3S1-202ENST00000395548 SART1O43290 800 aaKnown RBP7.94□□□□□ -1.14
AP3S1-202ENST00000395548 CA12O43570 354 aa7.94□□□□□ -1.14
AP3S1-202ENST00000395548 FSTP19883 344 aa7.94□□□□□ -1.14
AP3S1-202ENST00000395548 NLRP12P59046 1061 aa7.94□□□□□ -1.14
AP3S1-202ENST00000395548 ARHGAP4P98171 946 aa7.94□□□□□ -1.14
AP3S1-202ENST00000395548 SAFB2Q14151 953 aaKnown RBP eCLIP7.94□□□□□ -1.14
AP3S1-202ENST00000395548 ECM1Q16610 540 aa7.94□□□□□ -1.14
AP3S1-202ENST00000395548 PEAR1Q5VY43 1037 aaPredicted RBP7.94□□□□□ -1.14
AP3S1-202ENST00000395548 ANKRD34AQ69YU3 496 aa7.94□□□□□ -1.14
AP3S1-202ENST00000395548 VN1R5Q7Z5H4 357 aa7.94□□□□□ -1.14
AP3S1-202ENST00000395548 UBASH3BQ8TF42 649 aa7.94□□□□□ -1.14
AP3S1-202ENST00000395548 SOX17Q9H6I2 414 aaPredicted RBP7.94□□□□□ -1.14
AP3S1-202ENST00000395548 POGKQ9P215 609 aa7.94□□□□□ -1.14
AP3S1-202ENST00000395548 RNF112Q9ULX5 631 aa7.94□□□□□ -1.14
AP3S1-202ENST00000395548 WDR33Q9C0J8 1336 aaKnown RBP7.94□□□□□ -1.14
AP3S1-202ENST00000395548 PRR36Q9H6K5 1346 aa7.94□□□□□ -1.14
AP3S1-202ENST00000395548 CCDC7Q96M83 1385 aa7.94□□□□□ -1.14
AP3S1-202ENST00000395548 A0A0G2JLW4 131 aa7.93□□□□□ -1.14
AP3S1-202ENST00000395548 RASSF10A6NK89 507 aa7.93□□□□□ -1.14
AP3S1-202ENST00000395548 POLR3DP05423 398 aaPredicted RBP7.93□□□□□ -1.14
AP3S1-202ENST00000395548 LRP8Q14114 963 aa7.93□□□□□ -1.14
AP3S1-202ENST00000395548 GALNT12Q8IXK2 581 aa7.93□□□□□ -1.14
AP3S1-202ENST00000395548 UTP4Q969X6 686 aaKnown RBP7.93□□□□□ -1.14
AP3S1-202ENST00000395548 FAM46AQ96IP4 442 aaKnown RBP7.93□□□□□ -1.14
AP3S1-202ENST00000395548 PRAM1Q96QH2 718 aa7.93□□□□□ -1.14
AP3S1-202ENST00000395548 RUSC1Q9BVN2 902 aa7.93□□□□□ -1.14
AP3S1-202ENST00000395548 LATS2Q9NRM7 1088 aa7.93□□□□□ -1.14
AP3S1-202ENST00000395548 SPATA31E1Q6ZUB1 1445 aa7.93□□□□□ -1.14
AP3S1-202ENST00000395548 COL18A1P39060 1754 aa7.92□□□□□ -1.14
AP3S1-202ENST00000395548 ARMC10Q8N2F6 343 aa7.92□□□□□ -1.14
AP3S1-202ENST00000395548 VIRMAQ69YN4 1812 aaKnown RBP7.92□□□□□ -1.14
AP3S1-202ENST00000395548 MEGF11A6BM72 1044 aa7.91□□□□□ -1.14
AP3S1-202ENST00000395548 ECE1P42892 770 aa7.91□□□□□ -1.14
AP3S1-202ENST00000395548 FDX2Q6P4F2 183 aa7.91□□□□□ -1.14
AP3S1-202ENST00000395548 TMC1Q8TDI8 760 aa7.91□□□□□ -1.14
AP3S1-202ENST00000395548 MYRFLQ96LU7 910 aa7.91□□□□□ -1.14
AP3S1-202ENST00000395548 WNK3Q9BYP7 1800 aa7.91□□□□□ -1.14
AP3S1-202ENST00000395548 ABCC6O95255 1503 aa7.9□□□□□ -1.14
AP3S1-202ENST00000395548 NSD3Q9BZ95 1437 aa7.9□□□□□ -1.14
AP3S1-202ENST00000395548 ADGRF5Q8IZF2 1346 aa7.9□□□□□ -1.14
AP3S1-202ENST00000395548 PASKQ96RG2 1323 aa7.9□□□□□ -1.14
AP3S1-202ENST00000395548 A0A1W2PP55 124 aa7.9□□□□□ -1.14
AP3S1-202ENST00000395548 CPNE3O75131 537 aaKnown RBP7.9□□□□□ -1.14
AP3S1-202ENST00000395548 ESRRAP11474 423 aaPredicted RBP7.9□□□□□ -1.14
AP3S1-202ENST00000395548 NBPF11Q86T75 865 aa7.9□□□□□ -1.14
AP3S1-202ENST00000395548 CCNJLQ8IV13 435 aa7.9□□□□□ -1.14
AP3S1-202ENST00000395548 SYTL4Q96C24 671 aaPredicted RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms