RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 CLTAP09496 248 aa12.74□□□□□ -0.37
RAPGEF3-202ENST00000395358 PDE1AP54750 535 aa12.74□□□□□ -0.37
RAPGEF3-202ENST00000395358 BLOC1S2Q6QNY1 142 aa12.74□□□□□ -0.37
RAPGEF3-202ENST00000395358 RHPN1Q8TCX5 695 aa12.74□□□□□ -0.37
RAPGEF3-202ENST00000395358 LEO1Q8WVC0 666 aaPredicted RBP12.74□□□□□ -0.37
RAPGEF3-202ENST00000395358 PPP1R12CQ9BZL4 782 aa12.74□□□□□ -0.37
RAPGEF3-202ENST00000395358 DCTPP1Q9H773 170 aa12.74□□□□□ -0.37
RAPGEF3-202ENST00000395358 COL16A1Q07092 1604 aaPredicted RBP12.74□□□□□ -0.37
RAPGEF3-202ENST00000395358 LRRD1A4D1F6 860 aa12.73□□□□□ -0.37
RAPGEF3-202ENST00000395358 A6NNZ2 444 aa12.73□□□□□ -0.37
RAPGEF3-202ENST00000395358 E7EVH7 732 aa12.73□□□□□ -0.37
RAPGEF3-202ENST00000395358 ADRA2BP18089 450 aa12.73□□□□□ -0.37
RAPGEF3-202ENST00000395358 POLE2P56282 527 aa12.73□□□□□ -0.37
RAPGEF3-202ENST00000395358 FANCCQ00597 558 aa12.73□□□□□ -0.37
RAPGEF3-202ENST00000395358 TUBB8Q3ZCM7 444 aa12.73□□□□□ -0.37
RAPGEF3-202ENST00000395358 RC3H1Q5TC82 1133 aaKnown RBP12.73□□□□□ -0.37
RAPGEF3-202ENST00000395358 CLEC4GQ6UXB4 293 aa12.73□□□□□ -0.37
RAPGEF3-202ENST00000395358 SPAG5Q96R06 1193 aa12.73□□□□□ -0.37
RAPGEF3-202ENST00000395358 XIRP1Q702N8 1843 aaKnown RBP12.73□□□□□ -0.37
RAPGEF3-202ENST00000395358 ABCD1P33897 745 aa12.73□□□□□ -0.37
RAPGEF3-202ENST00000395358 PRPHP41219 470 aa12.73□□□□□ -0.37
RAPGEF3-202ENST00000395358 CPLX4Q7Z7G2 160 aa12.73□□□□□ -0.37
RAPGEF3-202ENST00000395358 WDR66Q8TBY9 1149 aa12.73□□□□□ -0.37
RAPGEF3-202ENST00000395358 ZKSCAN4Q969J2 545 aaPredicted RBP12.73□□□□□ -0.37
RAPGEF3-202ENST00000395358 MTMR6Q9Y217 621 aa12.73□□□□□ -0.37
RAPGEF3-202ENST00000395358 GOLGA6L10A0A0M3HER8 536 aa12.73□□□□□ -0.37
RAPGEF3-202ENST00000395358 IL15P40933 162 aaPredicted RBP12.73□□□□□ -0.37
RAPGEF3-202ENST00000395358 SEPT14Q6ZU15 432 aa12.73□□□□□ -0.37
RAPGEF3-202ENST00000395358 PA2G4Q9UQ80 394 aaKnown RBP12.73□□□□□ -0.37
RAPGEF3-202ENST00000395358 PFDN1O60925 122 aa12.73□□□□□ -0.37
RAPGEF3-202ENST00000395358 GOLGA8FQ08AF8 430 aa12.73□□□□□ -0.37
RAPGEF3-202ENST00000395358 GOLGA8DPQ0D2H9 430 aa12.73□□□□□ -0.37
RAPGEF3-202ENST00000395358 ITPK1Q13572 414 aa12.73□□□□□ -0.37
RAPGEF3-202ENST00000395358 VPS53Q5VIR6 699 aa12.73□□□□□ -0.37
RAPGEF3-202ENST00000395358 PARP9Q8IXQ6 854 aa12.73□□□□□ -0.37
RAPGEF3-202ENST00000395358 LMNTD2Q8IXW0 634 aa12.73□□□□□ -0.37
RAPGEF3-202ENST00000395358 ANKIB1Q9P2G1 1089 aa12.73□□□□□ -0.37
RAPGEF3-202ENST00000395358 CPP00450 1065 aa12.72□□□□□ -0.37
RAPGEF3-202ENST00000395358 SND1Q7KZF4 910 aaKnown RBP eCLIP12.72□□□□□ -0.37
RAPGEF3-202ENST00000395358 FSD1Q9BTV5 496 aa12.72□□□□□ -0.37
RAPGEF3-202ENST00000395358 ZNHIT6Q9NWK9 470 aaKnown RBP12.72□□□□□ -0.37
RAPGEF3-202ENST00000395358 COL15A1P39059 1388 aa12.72□□□□□ -0.37
RAPGEF3-202ENST00000395358 CDKL5O76039 1030 aa12.72□□□□□ -0.37
RAPGEF3-202ENST00000395358 HPDP32754 393 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF3-202ENST00000395358 SF3A3Q12874 501 aaKnown RBP eCLIP12.72□□□□□ -0.37
RAPGEF3-202ENST00000395358 KCNB1Q14721 858 aa12.72□□□□□ -0.37
RAPGEF3-202ENST00000395358 ANKRD1Q15327 319 aa12.72□□□□□ -0.37
RAPGEF3-202ENST00000395358 B4GALNT2Q8NHY0 566 aa12.72□□□□□ -0.37
RAPGEF3-202ENST00000395358 PPANQ9NQ55 473 aaKnown RBP12.72□□□□□ -0.37
RAPGEF3-202ENST00000395358 FAM53CQ9NYF3 392 aa12.72□□□□□ -0.37
RAPGEF3-202ENST00000395358 NARFQ9UHQ1 456 aa12.72□□□□□ -0.37
RAPGEF3-202ENST00000395358 EN1Q05925 392 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF3-202ENST00000395358 TCP11Q8WWU5 503 aa12.72□□□□□ -0.37
RAPGEF3-202ENST00000395358 CCDC8Q9H0W5 538 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF3-202ENST00000395358 TMEM165Q9HC07 324 aa12.72□□□□□ -0.37
RAPGEF3-202ENST00000395358 GLRX3O76003 335 aaKnown RBP12.71□□□□□ -0.37
RAPGEF3-202ENST00000395358 NLRP10Q86W26 655 aa12.71□□□□□ -0.37
RAPGEF3-202ENST00000395358 MYLK4Q86YV6 388 aaPredicted RBP12.71□□□□□ -0.37
RAPGEF3-202ENST00000395358 ARL10Q8N8L6 244 aa12.71□□□□□ -0.37
RAPGEF3-202ENST00000395358 TCEANC2Q96MN5 208 aa12.71□□□□□ -0.37
RAPGEF3-202ENST00000395358 BATF3Q9NR55 127 aa12.71□□□□□ -0.37
RAPGEF3-202ENST00000395358 FAM208AQ9UK61 1670 aaKnown RBP12.71□□□□□ -0.37
RAPGEF3-202ENST00000395358 MEFVO15553 781 aaPredicted RBP12.71□□□□□ -0.37
RAPGEF3-202ENST00000395358 SLC5A1P13866 664 aa12.71□□□□□ -0.37
RAPGEF3-202ENST00000395358 TPP2P29144 1249 aaPredicted RBP12.71□□□□□ -0.37
RAPGEF3-202ENST00000395358 GUCY1B3Q02153 619 aa12.71□□□□□ -0.37
RAPGEF3-202ENST00000395358 CDC37L1Q7L3B6 337 aa12.71□□□□□ -0.37
RAPGEF3-202ENST00000395358 KAT2BQ92831 832 aa12.71□□□□□ -0.37
RAPGEF3-202ENST00000395358 PCMTD1Q96MG8 357 aaPredicted RBP12.71□□□□□ -0.37
RAPGEF3-202ENST00000395358 OSBPL9Q96SU4 736 aa12.71□□□□□ -0.37
RAPGEF3-202ENST00000395358 FAM167BQ9BTA0 163 aa12.71□□□□□ -0.37
RAPGEF3-202ENST00000395358 KAT14Q9H8E8 782 aa12.71□□□□□ -0.37
RAPGEF3-202ENST00000395358 SRP68Q9UHB9 627 aaKnown RBP12.71□□□□□ -0.37
RAPGEF3-202ENST00000395358 SGSM2O43147 1006 aa12.71□□□□□ -0.38
RAPGEF3-202ENST00000395358 PDCLQ13371 301 aa12.71□□□□□ -0.38
RAPGEF3-202ENST00000395358 HLFQ16534 295 aa12.71□□□□□ -0.38
RAPGEF3-202ENST00000395358 CAVIN4Q5BKX8 364 aa12.71□□□□□ -0.38
RAPGEF3-202ENST00000395358 TAX1BP1Q86VP1 789 aa12.71□□□□□ -0.38
RAPGEF3-202ENST00000395358 LINC00116Q8NCU8 138 aa12.71□□□□□ -0.38
RAPGEF3-202ENST00000395358 CCDC47Q96A33 483 aaKnown RBP12.71□□□□□ -0.38
RAPGEF3-202ENST00000395358 HINFPQ9BQA5 517 aa12.71□□□□□ -0.38
RAPGEF3-202ENST00000395358 CDC23Q9UJX2 597 aa12.71□□□□□ -0.38
RAPGEF3-202ENST00000395358 HIBCHQ6NVY1 386 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF3-202ENST00000395358 NAPGQ99747 312 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF3-202ENST00000395358 PNMA6EA0A0J9YXQ4 647 aa12.7□□□□□ -0.38
RAPGEF3-202ENST00000395358 ITGA6P23229 1130 aa12.7□□□□□ -0.38
RAPGEF3-202ENST00000395358 IFFO1Q0D2I5 559 aa12.7□□□□□ -0.38
RAPGEF3-202ENST00000395358 SARM1Q6SZW1 724 aa12.7□□□□□ -0.38
RAPGEF3-202ENST00000395358 ARHGEF1Q92888 912 aaKnown RBP12.7□□□□□ -0.38
RAPGEF3-202ENST00000395358 CREB3O43889 395 aa12.7□□□□□ -0.38
RAPGEF3-202ENST00000395358 PDIA6Q15084 440 aa12.7□□□□□ -0.38
RAPGEF3-202ENST00000395358 RIN2Q8WYP3 895 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF3-202ENST00000395358 ZMYND10O75800 440 aa12.69□□□□□ -0.38
RAPGEF3-202ENST00000395358 IGKV5-2P06315 115 aa12.69□□□□□ -0.38
RAPGEF3-202ENST00000395358 FKBP4Q02790 459 aaKnown RBP eCLIP12.69□□□□□ -0.38
RAPGEF3-202ENST00000395358 PREPLQ4J6C6 727 aaPredicted RBP12.69□□□□□ -0.38
RAPGEF3-202ENST00000395358 KCTD16Q68DU8 428 aa12.69□□□□□ -0.38
RAPGEF3-202ENST00000395358 TRIM58Q8NG06 486 aa12.69□□□□□ -0.38
RAPGEF3-202ENST00000395358 FUCA2Q9BTY2 467 aa12.69□□□□□ -0.38
RAPGEF3-202ENST00000395358 JADE2Q9NQC1 790 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms