RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 ZC3H7BQ9UGR2 993 aaKnown RBP4.86□□□□□ -1.63
HERC4-204ENST00000395198 GPR52Q9Y2T5 361 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 CCDC66A2RUB6 948 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 FAM196BA6NMK8 535 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 TBKBP1A7MCY6 615 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 TMCO5BA8MYB1 307 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 MXI1P50539 228 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 GSCP56915 257 aaPredicted RBP4.86□□□□□ -1.63
HERC4-204ENST00000395198 TRDNQ13061 729 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 TCIRG1Q13488 830 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 ELF2Q15723 593 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 SEPT7Q16181 437 aaKnown RBP4.86□□□□□ -1.63
HERC4-204ENST00000395198 FILIP1LQ4L180 1135 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 POMZP3Q6PJE2 187 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 SLC44A2Q8IWA5 706 aaPredicted RBP4.86□□□□□ -1.63
HERC4-204ENST00000395198 LINC00469Q8N7U9 141 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 SUN5Q8TC36 379 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 SYMPKQ92797 1274 aaKnown RBP4.86□□□□□ -1.63
HERC4-204ENST00000395198 HOOK2Q96ED9 719 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 RBM14Q96PK6 669 aaKnown RBP4.86□□□□□ -1.63
HERC4-204ENST00000395198 PLEKHG4BQ96PX9 1271 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 SMAD5Q99717 465 aaKnown RBP4.86□□□□□ -1.63
HERC4-204ENST00000395198 MRS2Q9HD23 443 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 UBAP1Q9NZ09 502 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 CFDP1Q9UEE9 299 aaPredicted RBP4.86□□□□□ -1.63
HERC4-204ENST00000395198 TARBP1Q13395 1621 aaKnown RBP4.86□□□□□ -1.63
HERC4-204ENST00000395198 SHROOM2Q13796 1616 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 CLASP2O75122 1294 aaKnown RBP4.86□□□□□ -1.63
HERC4-204ENST00000395198 LDHBP07195 334 aaKnown RBP4.86□□□□□ -1.63
HERC4-204ENST00000395198 MZF1P28698 734 aaPredicted RBP4.86□□□□□ -1.63
HERC4-204ENST00000395198 ARHGEF6Q15052 776 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 MCTP2Q6DN12 878 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 TOGARAM2Q6ZUX3 1019 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 RBM12BQ8IXT5 1001 aaKnown RBP4.86□□□□□ -1.63
HERC4-204ENST00000395198 CELF2-AS1Q8N7Q2 184 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 ZNF606Q8WXB4 792 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 STARD7Q9NQZ5 370 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 USP17L3A6NCW0 530 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 USP17L4A6NCW7 530 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 HSPA4P34932 840 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 MTHFRP42898 656 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 PURAQ00577 322 aaKnown RBP4.86□□□□□ -1.63
HERC4-204ENST00000395198 APOBRQ0VD83 1088 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 HLTFQ14527 1009 aaKnown RBP eCLIP4.86□□□□□ -1.632e-6■■■■□ 23.7
HERC4-204ENST00000395198 DSC3Q14574 896 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 USP17L2Q6R6M4 530 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 USP17L1Q7RTZ2 530 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 ZNF354CQ86Y25 554 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 ERC1Q8IUD2 1116 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 ZSCAN29Q8IWY8 852 aaPredicted RBP4.86□□□□□ -1.63
HERC4-204ENST00000395198 LRRC43Q8N309 656 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 SGCDQ92629 289 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 MRPL9Q9BYD2 267 aaKnown RBP4.86□□□□□ -1.63
HERC4-204ENST00000395198 ATP6V0A4Q9HBG4 840 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 SIRT5Q9NXA8 310 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 EIF2B4Q9UI10 523 aaKnown RBP4.86□□□□□ -1.63
HERC4-204ENST00000395198 FAM50BQ9Y247 325 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 A0A087X0B3 334 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 LRRC10BA6NIK2 292 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 SASH1O94885 1247 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 PRLRP16471 622 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 MUTP22033 750 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 POLR2BP30876 1174 aaKnown RBP4.85□□□□□ -1.63
HERC4-204ENST00000395198 KRT20P35900 424 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 STAT3P40763 770 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 MLLT1Q03111 559 aaPredicted RBP4.85□□□□□ -1.63
HERC4-204ENST00000395198 TATDN1Q6P1N9 297 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 ZER1Q7Z7L7 766 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 TAB3Q8N5C8 712 aaPredicted RBP4.85□□□□□ -1.63
HERC4-204ENST00000395198 C1orf216Q8TAB5 229 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 ATP6V1E2Q96A05 226 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 CNDP1Q96KN2 507 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 BARD1Q99728 777 aaKnown RBP4.85□□□□□ -1.63
HERC4-204ENST00000395198 CARMIL1Q5VZK9 1371 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 PRPF40AO75400 957 aaKnown RBP4.85□□□□□ -1.63
HERC4-204ENST00000395198 INPP5BP32019 993 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 RIPK4P57078 832 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 FAM196AQ6ZSG2 479 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 RIC3Q7Z5B4 369 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 NRSN1Q8IZ57 195 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 ZNF654Q8IZM8 581 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 USP6NLQ92738 828 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 IPO9Q96P70 1041 aaKnown RBP4.85□□□□□ -1.63
HERC4-204ENST00000395198 PURBQ96QR8 312 aaKnown RBP4.85□□□□□ -1.63
HERC4-204ENST00000395198 TTPALQ9BTX7 342 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 ELAC1Q9H777 363 aaKnown RBP4.85□□□□□ -1.63
HERC4-204ENST00000395198 CREBZFQ9NS37 354 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 PCDHB15Q9Y5E8 787 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 KRBA1A5PL33 1030 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 KPNA6O60684 536 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 CDKL5O76039 1030 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 MBD4O95243 580 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 DGKGP49619 791 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 MRPS35P82673 323 aaKnown RBP4.85□□□□□ -1.63
HERC4-204ENST00000395198 GBE1Q04446 702 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 ADCY2Q08462 1091 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 MOGSQ13724 837 aa4.85□□□□□ -1.63
HERC4-204ENST00000395198 PDE1CQ14123 709 aaPredicted RBP4.85□□□□□ -1.63
HERC4-204ENST00000395198 RRP12Q5JTH9 1297 aaKnown RBP4.85□□□□□ -1.63
HERC4-204ENST00000395198 KIAA0319Q5VV43 1072 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 182.9 ms