RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 ARHGAP45Q92619 1136 aa19.41■□□□□ 0.7
SNCA-205ENST00000394991 LBHD1Q9BQE6 289 aaPredicted RBP19.41■□□□□ 0.7
SNCA-205ENST00000394991 PIH1D3Q9NQM4 214 aaKnown RBP19.41■□□□□ 0.7
SNCA-205ENST00000394991 A0A0G2JMZ2 1700 aa19.41■□□□□ 0.7
SNCA-205ENST00000394991 NAV1Q8NEY1 1877 aa19.4■□□□□ 0.7
SNCA-205ENST00000394991 SLC15A5A6NIM6 579 aa19.4■□□□□ 0.7
SNCA-205ENST00000394991 USP17L15C9J2P7 530 aa19.4■□□□□ 0.7
SNCA-205ENST00000394991 USP17L13C9JLJ4 530 aa19.4■□□□□ 0.7
SNCA-205ENST00000394991 USP17L11C9JVI0 530 aa19.4■□□□□ 0.7
SNCA-205ENST00000394991 USP17L18D6R9N7 530 aa19.4■□□□□ 0.7
SNCA-205ENST00000394991 USP17L22D6RA61 530 aa19.4■□□□□ 0.7
SNCA-205ENST00000394991 USP17L17D6RBQ6 530 aa19.4■□□□□ 0.7
SNCA-205ENST00000394991 USP17L19D6RCP7 530 aa19.4■□□□□ 0.7
SNCA-205ENST00000394991 USP17L20D6RJB6 530 aa19.4■□□□□ 0.7
SNCA-205ENST00000394991 HLA-DOAP06340 250 aa19.4■□□□□ 0.7
SNCA-205ENST00000394991 RTP1P59025 263 aa19.4■□□□□ 0.7
SNCA-205ENST00000394991 USP17L24Q0WX57 530 aa19.4■□□□□ 0.7
SNCA-205ENST00000394991 TNNI3KQ59H18 835 aa19.4■□□□□ 0.7
SNCA-205ENST00000394991 WDR78Q5VTH9 848 aa19.4■□□□□ 0.7
SNCA-205ENST00000394991 CATSPERGQ6ZRH7 1159 aa19.4■□□□□ 0.7
SNCA-205ENST00000394991 LPAR1Q92633 364 aa19.4■□□□□ 0.7
SNCA-205ENST00000394991 BTBD7Q9P203 1132 aa19.4■□□□□ 0.7
SNCA-205ENST00000394991 FPGT-TNNI3KV9GXZ4 949 aa19.4■□□□□ 0.7
SNCA-205ENST00000394991 EYSQ5T1H1 3165 aa19.4■□□□□ 0.7
SNCA-205ENST00000394991 VCANP13611 3396 aa19.39■□□□□ 0.69
SNCA-205ENST00000394991 GLRX3O76003 335 aaKnown RBP19.39■□□□□ 0.69
SNCA-205ENST00000394991 IGHA2P01877 340 aa19.39■□□□□ 0.69
SNCA-205ENST00000394991 GNAI2P04899 355 aa19.39■□□□□ 0.69
SNCA-205ENST00000394991 HOXC6P09630 235 aa19.39■□□□□ 0.69
SNCA-205ENST00000394991 CNGA1P29973 690 aa19.39■□□□□ 0.69
SNCA-205ENST00000394991 CYP2C19P33261 490 aa19.39■□□□□ 0.69
SNCA-205ENST00000394991 ZAP70P43403 619 aa19.39■□□□□ 0.69
SNCA-205ENST00000394991 CCNA1P78396 465 aa19.39■□□□□ 0.69
SNCA-205ENST00000394991 GRB14Q14449 540 aa19.39■□□□□ 0.69
SNCA-205ENST00000394991 TATDN1Q6P1N9 297 aa19.39■□□□□ 0.69
SNCA-205ENST00000394991 ACER1Q8TDN7 264 aa19.39■□□□□ 0.69
SNCA-205ENST00000394991 FEZ1Q99689 392 aa19.39■□□□□ 0.69
SNCA-205ENST00000394991 GPR108Q9NPR9 543 aa19.39■□□□□ 0.69
SNCA-205ENST00000394991 DNM1LO00429 736 aa19.38■□□□□ 0.69
SNCA-205ENST00000394991 VCAM1P19320 739 aa19.38■□□□□ 0.69
SNCA-205ENST00000394991 ZNF697Q5TEC3 545 aa19.38■□□□□ 0.69
SNCA-205ENST00000394991 LBX2Q6XYB7 198 aa19.38■□□□□ 0.69
SNCA-205ENST00000394991 ZNFX1Q9P2E3 1918 aaKnown RBP19.38■□□□□ 0.69
SNCA-205ENST00000394991 PARP14Q460N5 1801 aa19.37■□□□□ 0.69
SNCA-205ENST00000394991 SPDYE16A6NNV3 312 aaPredicted RBP19.37■□□□□ 0.69
SNCA-205ENST00000394991 MSCO60682 206 aa19.37■□□□□ 0.69
SNCA-205ENST00000394991 CYBAP13498 195 aa19.37■□□□□ 0.69
SNCA-205ENST00000394991 CYP7A1P22680 504 aa19.37■□□□□ 0.69
SNCA-205ENST00000394991 ATP2B2Q01814 1243 aa19.37■□□□□ 0.69
SNCA-205ENST00000394991 CCDC158Q5M9N0 1113 aa19.37■□□□□ 0.69
SNCA-205ENST00000394991 ATF7IPQ6VMQ6 1270 aa19.37■□□□□ 0.69
SNCA-205ENST00000394991 KIAA1683Q9H0B3 1180 aa19.37■□□□□ 0.69
SNCA-205ENST00000394991 TTC28Q96AY4 2481 aa19.37■□□□□ 0.69
SNCA-205ENST00000394991 SMCHD1A6NHR9 2005 aa19.37■□□□□ 0.69
SNCA-205ENST00000394991 MYH8P13535 1937 aa19.36■□□□□ 0.69
SNCA-205ENST00000394991 TRIM27P14373 513 aa19.36■□□□□ 0.69
SNCA-205ENST00000394991 POLA2Q14181 598 aa19.36■□□□□ 0.69
SNCA-205ENST00000394991 RAB3GAP1Q15042 981 aa19.36■□□□□ 0.69
SNCA-205ENST00000394991 SHHQ15465 462 aa19.36■□□□□ 0.69
SNCA-205ENST00000394991 C9orf50Q5SZB4 431 aa19.36■□□□□ 0.69
SNCA-205ENST00000394991 GJC2Q5T442 439 aaPredicted RBP19.36■□□□□ 0.69
SNCA-205ENST00000394991 MIGA1Q8NAN2 632 aa19.36■□□□□ 0.69
SNCA-205ENST00000394991 ZNF512BQ96KM6 892 aaPredicted RBP19.36■□□□□ 0.69
SNCA-205ENST00000394991 CDX2Q99626 313 aaPredicted RBP19.36■□□□□ 0.69
SNCA-205ENST00000394991 ATP11BQ9Y2G3 1177 aa19.36■□□□□ 0.69
SNCA-205ENST00000394991 GUCY1A2P33402 732 aa19.35■□□□□ 0.69
SNCA-205ENST00000394991 USP14P54578 494 aa19.35■□□□□ 0.69
SNCA-205ENST00000394991 EHD4Q9H223 541 aa19.35■□□□□ 0.69
SNCA-205ENST00000394991 TLR7Q9NYK1 1049 aaKnown RBP19.35■□□□□ 0.69
SNCA-205ENST00000394991 PRKAG2Q9UGJ0 569 aa19.35■□□□□ 0.69
SNCA-205ENST00000394991 SERPINB13Q9UIV8 391 aa19.35■□□□□ 0.69
SNCA-205ENST00000394991 DBNLQ9UJU6 430 aaKnown RBP19.35■□□□□ 0.69
SNCA-205ENST00000394991 IVNS1ABPQ9Y6Y0 642 aa19.35■□□□□ 0.69
SNCA-205ENST00000394991 SPTBN5Q9NRC6 3674 aaKnown RBP19.35■□□□□ 0.69
SNCA-205ENST00000394991 PRUNE2Q8WUY3 3088 aa19.34■□□□□ 0.69
SNCA-205ENST00000394991 CDH23Q9H251 3354 aa19.34■□□□□ 0.69
SNCA-205ENST00000394991 IGSF3O75054 1194 aa19.34■□□□□ 0.69
SNCA-205ENST00000394991 ABCB5Q2M3G0 1257 aa19.34■□□□□ 0.69
SNCA-205ENST00000394991 ANO1Q5XXA6 986 aa19.34■□□□□ 0.69
SNCA-205ENST00000394991 RPAP3Q9H6T3 665 aaPredicted RBP19.34■□□□□ 0.69
SNCA-205ENST00000394991 COL11A1P12107 1806 aaPredicted RBP19.34■□□□□ 0.69
SNCA-205ENST00000394991 SHMT1P34896 483 aa19.33■□□□□ 0.68
SNCA-205ENST00000394991 USP5P45974 858 aa19.33■□□□□ 0.68
SNCA-205ENST00000394991 CERKLQ49MI3 558 aaPredicted RBP19.33■□□□□ 0.68
SNCA-205ENST00000394991 SLC39A5Q6ZMH5 540 aa19.33■□□□□ 0.68
SNCA-205ENST00000394991 MAFAQ8NHW3 353 aaPredicted RBP19.33■□□□□ 0.68
SNCA-205ENST00000394991 SEMA6BQ9H3T3 888 aa19.33■□□□□ 0.68
SNCA-205ENST00000394991 PLXNA1Q9UIW2 1896 aa19.33■□□□□ 0.68
SNCA-205ENST00000394991 IDH1O75874 414 aaKnown RBP19.32■□□□□ 0.68
SNCA-205ENST00000394991 ADORA2AP29274 412 aa19.32■□□□□ 0.68
SNCA-205ENST00000394991 SNX17Q15036 470 aa19.32■□□□□ 0.68
SNCA-205ENST00000394991 TRIM60Q495X7 471 aa19.32■□□□□ 0.68
SNCA-205ENST00000394991 SSH3Q8TE77 659 aa19.32■□□□□ 0.68
SNCA-205ENST00000394991 BADQ92934 168 aa19.32■□□□□ 0.68
SNCA-205ENST00000394991 CLUAP1Q96AJ1 413 aa19.32■□□□□ 0.68
SNCA-205ENST00000394991 MOV10L1Q9BXT6 1211 aaKnown RBP19.32■□□□□ 0.68
SNCA-205ENST00000394991 TTYH1Q9H313 450 aaPredicted RBP19.32■□□□□ 0.68
SNCA-205ENST00000394991 PRDM5Q9NQX1 630 aaPredicted RBP19.32■□□□□ 0.68
SNCA-205ENST00000394991 PLCD1P51178 756 aa19.31■□□□□ 0.68
SNCA-205ENST00000394991 EVX2Q03828 476 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms