RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 BACE1P56817 501 aa23.67■■□□□ 1.38
SNCA-203ENST00000394986 FAM47AQ5JRC9 791 aa23.67■■□□□ 1.38
SNCA-203ENST00000394986 TREML2Q5T2D2 321 aa23.67■■□□□ 1.38
SNCA-203ENST00000394986 ANKRD23Q86SG2 305 aa23.67■■□□□ 1.38
SNCA-203ENST00000394986 TBC1D10CQ8IV04 446 aa23.67■■□□□ 1.38
SNCA-203ENST00000394986 ESYT1Q9BSJ8 1104 aa23.67■■□□□ 1.38
SNCA-203ENST00000394986 A0A1W2PRG0 241 aa23.66■■□□□ 1.38
SNCA-203ENST00000394986 PDHXO00330 501 aa23.66■■□□□ 1.38
SNCA-203ENST00000394986 CDC45O75419 566 aa23.66■■□□□ 1.38
SNCA-203ENST00000394986 ICA1Q05084 483 aa23.66■■□□□ 1.38
SNCA-203ENST00000394986 CRHR2Q13324 411 aa23.66■■□□□ 1.38
SNCA-203ENST00000394986 TAF1CQ15572 869 aaPredicted RBP23.66■■□□□ 1.38
SNCA-203ENST00000394986 FASTKD5Q7L8L6 764 aaKnown RBP23.66■■□□□ 1.38
SNCA-203ENST00000394986 FEZ1Q99689 392 aa23.66■■□□□ 1.38
SNCA-203ENST00000394986 ZNF287Q9HBT7 754 aa23.66■■□□□ 1.38
SNCA-203ENST00000394986 SH3D19Q5HYK7 790 aa23.65■■□□□ 1.38
SNCA-203ENST00000394986 SIAH1Q8IUQ4 282 aa23.65■■□□□ 1.38
SNCA-203ENST00000394986 ZNF444Q8N0Y2 327 aaPredicted RBP23.65■■□□□ 1.38
SNCA-203ENST00000394986 PTPRFP10586 1907 aa23.64■■□□□ 1.37
SNCA-203ENST00000394986 MYH8P13535 1937 aa23.64■■□□□ 1.37
SNCA-203ENST00000394986 PROCA1Q8NCQ7 364 aaPredicted RBP23.64■■□□□ 1.37
SNCA-203ENST00000394986 TOMM22Q9NS69 142 aa23.64■■□□□ 1.37
SNCA-203ENST00000394986 EMILIN3Q9NT22 766 aa23.64■■□□□ 1.37
SNCA-203ENST00000394986 AGTPBP1Q9UPW5 1226 aa23.64■■□□□ 1.37
SNCA-203ENST00000394986 ZNF213O14771 459 aa23.63■■□□□ 1.37
SNCA-203ENST00000394986 ATP2B2Q01814 1243 aa23.63■■□□□ 1.37
SNCA-203ENST00000394986 RRP12Q5JTH9 1297 aaKnown RBP23.63■■□□□ 1.37
SNCA-203ENST00000394986 NKX2-3Q8TAU0 364 aa23.63■■□□□ 1.37
SNCA-203ENST00000394986 CFHR5Q9BXR6 569 aa23.63■■□□□ 1.37
SNCA-203ENST00000394986 C19orf81C9J6K1 198 aa23.62■■□□□ 1.37
SNCA-203ENST00000394986 CYP2C8P10632 490 aa23.62■■□□□ 1.37
SNCA-203ENST00000394986 EEF2P13639 858 aaKnown RBP23.62■■□□□ 1.37
SNCA-203ENST00000394986 TFAP4Q01664 338 aa23.62■■□□□ 1.37
SNCA-203ENST00000394986 KIAA1683Q9H0B3 1180 aa23.62■■□□□ 1.37
SNCA-203ENST00000394986 TMOD4Q9NZQ9 345 aa23.62■■□□□ 1.37
SNCA-203ENST00000394986 NEDD4P46934 1319 aa23.62■■□□□ 1.37
SNCA-203ENST00000394986 LOC285556D6RIA3 1793 aa23.61■■□□□ 1.37
SNCA-203ENST00000394986 IGKV6D-41A0A0C4DH26 115 aa23.61■■□□□ 1.37
SNCA-203ENST00000394986 ORC4O43929 436 aa23.61■■□□□ 1.37
SNCA-203ENST00000394986 RANBP6O60518 1105 aaKnown RBP23.61■■□□□ 1.37
SNCA-203ENST00000394986 FGRP09769 529 aa23.61■■□□□ 1.37
SNCA-203ENST00000394986 TSPY3P0CV98 308 aa23.61■■□□□ 1.37
SNCA-203ENST00000394986 TSPY8P0CW00 308 aa23.61■■□□□ 1.37
SNCA-203ENST00000394986 IMMTQ16891 758 aaKnown RBP23.61■■□□□ 1.37
SNCA-203ENST00000394986 AKNAD1Q5T1N1 836 aa23.61■■□□□ 1.37
SNCA-203ENST00000394986 USP17L2Q6R6M4 530 aa23.61■■□□□ 1.37
SNCA-203ENST00000394986 LSG1Q9H089 658 aaKnown RBP23.61■■□□□ 1.37
SNCA-203ENST00000394986 KANSL2Q9H9L4 492 aa23.61■■□□□ 1.37
SNCA-203ENST00000394986 ZFYVE28Q9HCC9 887 aa23.61■■□□□ 1.37
SNCA-203ENST00000394986 ZCCHC17Q9NP64 241 aaKnown RBP23.61■■□□□ 1.37
SNCA-203ENST00000394986 CTNNA3Q9UI47 895 aa23.61■■□□□ 1.37
SNCA-203ENST00000394986 PLIN4Q96Q06 1357 aa23.6■■□□□ 1.37
SNCA-203ENST00000394986 NEDD1Q8NHV4 660 aa23.6■■□□□ 1.37
SNCA-203ENST00000394986 STAG1Q8WVM7 1258 aa23.6■■□□□ 1.37
SNCA-203ENST00000394986 CEP95Q96GE4 821 aa23.6■■□□□ 1.37
SNCA-203ENST00000394986 ARHGEF10LQ9HCE6 1279 aa23.6■■□□□ 1.37
SNCA-203ENST00000394986 ANO2Q9NQ90 1003 aa23.6■■□□□ 1.37
SNCA-203ENST00000394986 GREB1LQ9C091 1923 aaPredicted RBP23.6■■□□□ 1.37
SNCA-203ENST00000394986 TSPY2A6NKD2 308 aa23.59■■□□□ 1.37
SNCA-203ENST00000394986 KIAA1755Q5JYT7 1200 aa23.59■■□□□ 1.37
SNCA-203ENST00000394986 CASC1Q6TDU7 716 aa23.59■■□□□ 1.37
SNCA-203ENST00000394986 MFSD6Q6ZSS7 791 aa23.59■■□□□ 1.37
SNCA-203ENST00000394986 MAP4K1Q92918 833 aa23.59■■□□□ 1.37
SNCA-203ENST00000394986 TAF6LQ9Y6J9 622 aa23.59■■□□□ 1.37
SNCA-203ENST00000394986 U3KPZ7 1027 aaPredicted RBP23.59■■□□□ 1.37
SNCA-203ENST00000394986 GPR25O00155 361 aa23.59■■□□□ 1.37
SNCA-203ENST00000394986 NMT2O60551 498 aa23.59■■□□□ 1.37
SNCA-203ENST00000394986 USP14P54578 494 aa23.59■■□□□ 1.37
SNCA-203ENST00000394986 KIAA1211Q6ZU35 1233 aa23.59■■□□□ 1.37
SNCA-203ENST00000394986 C12orf42Q96LP6 360 aa23.59■■□□□ 1.37
SNCA-203ENST00000394986 PARK7Q99497 189 aaKnown RBP23.59■■□□□ 1.37
SNCA-203ENST00000394986 TMX2Q9Y320 296 aa23.59■■□□□ 1.37
SNCA-203ENST00000394986 RBM8AQ9Y5S9 174 aaKnown RBP23.59■■□□□ 1.37
SNCA-203ENST00000394986 LAMA4Q16363 1823 aa23.58■■□□□ 1.37
SNCA-203ENST00000394986 VCAM1P19320 739 aa23.58■■□□□ 1.36
SNCA-203ENST00000394986 ZNF296Q8WUU4 475 aaPredicted RBP23.58■■□□□ 1.36
SNCA-203ENST00000394986 MTMR4Q9NYA4 1195 aa23.58■■□□□ 1.36
SNCA-203ENST00000394986 SLC45A1Q9Y2W3 748 aa23.58■■□□□ 1.36
SNCA-203ENST00000394986 ADGRA2Q96PE1 1338 aa23.57■■□□□ 1.36
SNCA-203ENST00000394986 TLR2O60603 784 aa23.57■■□□□ 1.36
SNCA-203ENST00000394986 CYP21A2P08686 494 aa23.57■■□□□ 1.36
SNCA-203ENST00000394986 SPICE1Q8N0Z3 855 aa23.57■■□□□ 1.36
SNCA-203ENST00000394986 ASCC2Q9H1I8 757 aaPredicted RBP23.57■■□□□ 1.36
SNCA-203ENST00000394986 RNF41Q9H4P4 317 aaPredicted RBP23.57■■□□□ 1.36
SNCA-203ENST00000394986 IL17RBQ9NRM6 502 aa23.57■■□□□ 1.36
SNCA-203ENST00000394986 NYAP2Q9P242 653 aa23.57■■□□□ 1.36
SNCA-203ENST00000394986 CLIP2Q9UDT6 1046 aa23.57■■□□□ 1.36
SNCA-203ENST00000394986 CPA4Q9UI42 421 aa23.57■■□□□ 1.36
SNCA-203ENST00000394986 SH2D4AQ9H788 454 aa23.56■■□□□ 1.36
SNCA-203ENST00000394986 VCPKMTQ9H867 229 aa23.56■■□□□ 1.36
SNCA-203ENST00000394986 PRDM10Q9NQV6 1147 aa23.56■■□□□ 1.36
SNCA-203ENST00000394986 RAD21O60216 631 aa23.55■■□□□ 1.36
SNCA-203ENST00000394986 PABPC4Q13310 644 aaKnown RBP eCLIP23.55■■□□□ 1.36
SNCA-203ENST00000394986 LRRC47Q8N1G4 583 aaKnown RBP23.55■■□□□ 1.36
SNCA-203ENST00000394986 RPAP3Q9H6T3 665 aaPredicted RBP23.55■■□□□ 1.36
SNCA-203ENST00000394986 B4E1Z4 1266 aa23.54■■□□□ 1.36
SNCA-203ENST00000394986 PCP11498 1178 aaKnown RBP23.54■■□□□ 1.36
SNCA-203ENST00000394986 IRX3P78415 501 aaPredicted RBP23.54■■□□□ 1.36
SNCA-203ENST00000394986 SMCR8Q8TEV9 937 aaPredicted RBP23.54■■□□□ 1.36
SNCA-203ENST00000394986 PNMA3Q9UL41 463 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms