RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 AGXT2Q9BYV1 514 aa13.18□□□□□ -0.3
UBE2D3-209ENST00000394804 TRPM3Q9HCF6 1732 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-209ENST00000394804 SMC1AQ14683 1233 aaKnown RBP13.18□□□□□ -0.3
UBE2D3-209ENST00000394804 CCDC178Q5BJE1 867 aa13.18□□□□□ -0.3
UBE2D3-209ENST00000394804 SPTY2D1Q68D10 685 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-209ENST00000394804 DTHD1Q6ZMT9 781 aa13.18□□□□□ -0.3
UBE2D3-209ENST00000394804 RAB34Q9BZG1 259 aa13.18□□□□□ -0.3
UBE2D3-209ENST00000394804 VPS18Q9P253 973 aa13.18□□□□□ -0.3
UBE2D3-209ENST00000394804 STX8Q9UNK0 236 aa13.18□□□□□ -0.3
UBE2D3-209ENST00000394804 PAFAH1B1P43034 410 aa13.17□□□□□ -0.3
UBE2D3-209ENST00000394804 RABGGTAQ92696 567 aa13.17□□□□□ -0.3
UBE2D3-209ENST00000394804 CSRNP2Q9H175 543 aa13.17□□□□□ -0.3
UBE2D3-209ENST00000394804 DENND2AQ9ULE3 1009 aa13.17□□□□□ -0.3
UBE2D3-209ENST00000394804 MED1Q15648 1581 aaPredicted RBP13.17□□□□□ -0.3
UBE2D3-209ENST00000394804 NR5A1Q13285 461 aa13.17□□□□□ -0.3
UBE2D3-209ENST00000394804 COL9A3Q14050 684 aaPredicted RBP13.17□□□□□ -0.3
UBE2D3-209ENST00000394804 BRD3Q15059 726 aa13.17□□□□□ -0.3
UBE2D3-209ENST00000394804 SHC4Q6S5L8 630 aa13.17□□□□□ -0.3
UBE2D3-209ENST00000394804 RNF26Q9BY78 433 aaPredicted RBP13.17□□□□□ -0.3
UBE2D3-209ENST00000394804 TAB2Q9NYJ8 693 aa13.17□□□□□ -0.3
UBE2D3-209ENST00000394804 STK36Q9NRP7 1315 aa13.17□□□□□ -0.3
UBE2D3-209ENST00000394804 ATP8B1O43520 1251 aa13.17□□□□□ -0.3
UBE2D3-209ENST00000394804 CAPN2P17655 700 aa13.17□□□□□ -0.3
UBE2D3-209ENST00000394804 TMEM266Q2M3C6 531 aa13.17□□□□□ -0.3
UBE2D3-209ENST00000394804 TSG101Q99816 390 aa13.17□□□□□ -0.3
UBE2D3-209ENST00000394804 CDC27P30260 824 aa13.17□□□□□ -0.3
UBE2D3-209ENST00000394804 TERF2Q15554 542 aa13.17□□□□□ -0.3
UBE2D3-209ENST00000394804 CTR9Q6PD62 1173 aa13.17□□□□□ -0.3
UBE2D3-209ENST00000394804 HEATR3Q7Z4Q2 680 aa13.17□□□□□ -0.3
UBE2D3-209ENST00000394804 GRAMD1CQ8IYS0 662 aa13.17□□□□□ -0.3
UBE2D3-209ENST00000394804 ALS2CR12Q96Q35 445 aa13.17□□□□□ -0.3
UBE2D3-209ENST00000394804 CPDO75976 1380 aa13.17□□□□□ -0.3
UBE2D3-209ENST00000394804 IVLP07476 585 aa13.16□□□□□ -0.3
UBE2D3-209ENST00000394804 PTPREP23469 700 aa13.16□□□□□ -0.3
UBE2D3-209ENST00000394804 ASIC1P78348 528 aa13.16□□□□□ -0.3
UBE2D3-209ENST00000394804 TRIM28Q13263 835 aaKnown RBP13.16□□□□□ -0.3
UBE2D3-209ENST00000394804 MAPK8IP1Q9UQF2 711 aa13.16□□□□□ -0.3
UBE2D3-209ENST00000394804 LRP6O75581 1613 aa13.16□□□□□ -0.3
UBE2D3-209ENST00000394804 TMEM232C9JQI7 657 aa13.16□□□□□ -0.3
UBE2D3-209ENST00000394804 BAG3O95817 575 aa13.16□□□□□ -0.3
UBE2D3-209ENST00000394804 BCAMP50895 628 aa13.16□□□□□ -0.3
UBE2D3-209ENST00000394804 ANTXR2P58335 489 aa13.16□□□□□ -0.3
UBE2D3-209ENST00000394804 SDR42E1Q8WUS8 393 aa13.16□□□□□ -0.3
UBE2D3-209ENST00000394804 ZHX3Q9H4I2 956 aa13.16□□□□□ -0.3
UBE2D3-209ENST00000394804 SRPRBQ9Y5M8 271 aaKnown RBP13.16□□□□□ -0.3
UBE2D3-209ENST00000394804 AKR1B10O60218 316 aa13.16□□□□□ -0.3
UBE2D3-209ENST00000394804 PNMA6AP0CW24 399 aaPredicted RBP13.16□□□□□ -0.3
UBE2D3-209ENST00000394804 IDEP14735 1019 aa13.16□□□□□ -0.3
UBE2D3-209ENST00000394804 TDRD12Q587J7 1177 aaKnown RBP13.16□□□□□ -0.3
UBE2D3-209ENST00000394804 CCDC122Q5T0U0 273 aa13.16□□□□□ -0.3
UBE2D3-209ENST00000394804 GSDMAQ96QA5 445 aa13.16□□□□□ -0.3
UBE2D3-209ENST00000394804 SAMSN1Q9NSI8 373 aaKnown RBP13.16□□□□□ -0.3
UBE2D3-209ENST00000394804 MCM9Q9NXL9 1143 aa13.16□□□□□ -0.3
UBE2D3-209ENST00000394804 PCDHB6Q9Y5E3 794 aa13.16□□□□□ -0.3
UBE2D3-209ENST00000394804 NEDD4P46934 1319 aa13.15□□□□□ -0.3
UBE2D3-209ENST00000394804 KIF5AQ12840 1032 aa13.15□□□□□ -0.3
UBE2D3-209ENST00000394804 SYMPKQ92797 1274 aaKnown RBP13.15□□□□□ -0.3
UBE2D3-209ENST00000394804 BLZF1Q9H2G9 400 aa13.15□□□□□ -0.3
UBE2D3-209ENST00000394804 BICDL2A1A5D9 508 aa13.15□□□□□ -0.3
UBE2D3-209ENST00000394804 LDHCP07864 332 aa13.15□□□□□ -0.3
UBE2D3-209ENST00000394804 TSPY3P0CV98 308 aa13.15□□□□□ -0.3
UBE2D3-209ENST00000394804 TSPY8P0CW00 308 aa13.15□□□□□ -0.3
UBE2D3-209ENST00000394804 SGMS1Q86VZ5 419 aa13.15□□□□□ -0.3
UBE2D3-209ENST00000394804 CRACR2BQ8N4Y2 399 aaPredicted RBP13.15□□□□□ -0.3
UBE2D3-209ENST00000394804 NELFBQ8WX92 580 aa13.15□□□□□ -0.3
UBE2D3-209ENST00000394804 ZSCAN10Q96SZ4 725 aaPredicted RBP13.15□□□□□ -0.3
UBE2D3-209ENST00000394804 LY9Q9HBG7 655 aa13.15□□□□□ -0.3
UBE2D3-209ENST00000394804 ANKIB1Q9P2G1 1089 aa13.15□□□□□ -0.3
UBE2D3-209ENST00000394804 ZBTB1Q9Y2K1 713 aa13.15□□□□□ -0.3
UBE2D3-209ENST00000394804 UBN2Q6ZU65 1347 aa13.15□□□□□ -0.3
UBE2D3-209ENST00000394804 PRKAB2O43741 272 aa13.15□□□□□ -0.3
UBE2D3-209ENST00000394804 CDR1P51861 262 aa13.15□□□□□ -0.3
UBE2D3-209ENST00000394804 ATP2B2Q01814 1243 aa13.15□□□□□ -0.3
UBE2D3-209ENST00000394804 CCDC96Q2M329 555 aa13.15□□□□□ -0.3
UBE2D3-209ENST00000394804 SLF1Q9BQI6 1058 aa13.15□□□□□ -0.3
UBE2D3-209ENST00000394804 TUBE1Q9UJT0 475 aa13.15□□□□□ -0.3
UBE2D3-209ENST00000394804 SEC31AO94979 1220 aaKnown RBP13.14□□□□□ -0.31
UBE2D3-209ENST00000394804 SLFN14P0C7P3 912 aa13.14□□□□□ -0.31
UBE2D3-209ENST00000394804 ACSBG1Q96GR2 724 aa13.14□□□□□ -0.31
UBE2D3-209ENST00000394804 HPS5Q9UPZ3 1129 aa13.14□□□□□ -0.31
UBE2D3-209ENST00000394804 ALS2Q96Q42 1657 aa13.14□□□□□ -0.31
UBE2D3-209ENST00000394804 KDM6AO15550 1401 aaPredicted RBP13.14□□□□□ -0.31
UBE2D3-209ENST00000394804 H0YHG0 523 aa13.14□□□□□ -0.31
UBE2D3-209ENST00000394804 PHACTR2O75167 634 aa13.14□□□□□ -0.31
UBE2D3-209ENST00000394804 ZPR1O75312 459 aa13.14□□□□□ -0.31
UBE2D3-209ENST00000394804 ALX1Q15699 326 aa13.14□□□□□ -0.31
UBE2D3-209ENST00000394804 CT47A1Q5JQC4 288 aaPredicted RBP13.14□□□□□ -0.31
UBE2D3-209ENST00000394804 CDHR2Q9BYE9 1310 aa13.14□□□□□ -0.31
UBE2D3-209ENST00000394804 TACC1O75410 805 aa13.14□□□□□ -0.31
UBE2D3-209ENST00000394804 RASGRF1Q13972 1273 aa13.14□□□□□ -0.31
UBE2D3-209ENST00000394804 LCORLQ8N3X6 602 aa13.14□□□□□ -0.31
UBE2D3-209ENST00000394804 DPF2Q92785 391 aa13.14□□□□□ -0.31
UBE2D3-209ENST00000394804 CAPZA3Q96KX2 299 aa13.14□□□□□ -0.31
UBE2D3-209ENST00000394804 CCDC42Q96M95 316 aa13.14□□□□□ -0.31
UBE2D3-209ENST00000394804 QTRT2Q9H974 415 aaKnown RBP13.14□□□□□ -0.31
UBE2D3-209ENST00000394804 CCDC87Q9NVE4 849 aa13.14□□□□□ -0.31
UBE2D3-209ENST00000394804 CDC23Q9UJX2 597 aa13.14□□□□□ -0.31
UBE2D3-209ENST00000394804 GOLGA6L10A6NI86 522 aa13.13□□□□□ -0.31
UBE2D3-209ENST00000394804 CASP7P55210 303 aa13.13□□□□□ -0.31
UBE2D3-209ENST00000394804 SRGAP1Q7Z6B7 1085 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms