RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 RASGRP2Q7LDG7 609 aa11.4□□□□□ -0.58
UBE2D3-208ENST00000394803 HDXQ7Z353 690 aa11.4□□□□□ -0.58
UBE2D3-208ENST00000394803 CATIPQ7Z7H3 387 aa11.4□□□□□ -0.58
UBE2D3-208ENST00000394803 ARMT1Q9H993 441 aa11.4□□□□□ -0.58
UBE2D3-208ENST00000394803 SENP2Q9HC62 589 aa11.4□□□□□ -0.58
UBE2D3-208ENST00000394803 ADD3Q9UEY8 706 aaKnown RBP11.4□□□□□ -0.58
UBE2D3-208ENST00000394803 KCNJ14Q9UNX9 436 aa11.4□□□□□ -0.58
UBE2D3-208ENST00000394803 MYO5AQ9Y4I1 1855 aaKnown RBP11.4□□□□□ -0.58
UBE2D3-208ENST00000394803 PCDHB6Q9Y5E3 794 aa11.4□□□□□ -0.58
UBE2D3-208ENST00000394803 ADGRG1Q9Y653 693 aa11.4□□□□□ -0.58
UBE2D3-208ENST00000394803 FOXN1O15353 648 aa11.39□□□□□ -0.59
UBE2D3-208ENST00000394803 PRPF3O43395 683 aaKnown RBP11.39□□□□□ -0.59
UBE2D3-208ENST00000394803 OAS2P29728 719 aaKnown RBP11.39□□□□□ -0.59
UBE2D3-208ENST00000394803 IL6STP40189 918 aaPredicted RBP11.39□□□□□ -0.59
UBE2D3-208ENST00000394803 SH3RF1Q7Z6J0 888 aa11.39□□□□□ -0.59
UBE2D3-208ENST00000394803 NUP133Q8WUM0 1156 aa11.39□□□□□ -0.59
UBE2D3-208ENST00000394803 EXOC4Q96A65 974 aa11.39□□□□□ -0.59
UBE2D3-208ENST00000394803 DHX58Q96C10 678 aa11.39□□□□□ -0.59
UBE2D3-208ENST00000394803 PARD6BQ9BYG5 372 aa11.39□□□□□ -0.59
UBE2D3-208ENST00000394803 CABP5Q9NP86 173 aa11.39□□□□□ -0.59
UBE2D3-208ENST00000394803 SAMSN1Q9NSI8 373 aaKnown RBP11.39□□□□□ -0.59
UBE2D3-208ENST00000394803 DENND2AQ9ULE3 1009 aa11.39□□□□□ -0.59
UBE2D3-208ENST00000394803 NUP98P52948 1817 aa11.39□□□□□ -0.59
UBE2D3-208ENST00000394803 ERICH4A6NGS2 130 aa11.39□□□□□ -0.59
UBE2D3-208ENST00000394803 GPTP24298 496 aa11.39□□□□□ -0.59
UBE2D3-208ENST00000394803 PBX1P40424 430 aa11.39□□□□□ -0.59
UBE2D3-208ENST00000394803 USP5P45974 858 aa11.39□□□□□ -0.59
UBE2D3-208ENST00000394803 PPARAQ07869 468 aa11.39□□□□□ -0.59
UBE2D3-208ENST00000394803 SPECC1Q5M775 1068 aa11.39□□□□□ -0.59
UBE2D3-208ENST00000394803 CYP26C1Q6V0L0 522 aa11.39□□□□□ -0.59
UBE2D3-208ENST00000394803 IQCA1Q86XH1 822 aa11.39□□□□□ -0.59
UBE2D3-208ENST00000394803 TRMT44Q8IYL2 757 aaKnown RBP11.39□□□□□ -0.59
UBE2D3-208ENST00000394803 IQUBQ8NA54 791 aa11.39□□□□□ -0.59
UBE2D3-208ENST00000394803 GNL3LQ9NVN8 582 aaKnown RBP11.39□□□□□ -0.59
UBE2D3-208ENST00000394803 ABCA3Q99758 1704 aa11.38□□□□□ -0.59
UBE2D3-208ENST00000394803 DDAH1O94760 285 aa11.38□□□□□ -0.59
UBE2D3-208ENST00000394803 GTF2E1P29083 439 aaPredicted RBP11.38□□□□□ -0.59
UBE2D3-208ENST00000394803 IGHMBP2P38935 993 aaKnown RBP11.38□□□□□ -0.59
UBE2D3-208ENST00000394803 CUL4BQ13620 913 aa11.38□□□□□ -0.59
UBE2D3-208ENST00000394803 RASGRF1Q13972 1273 aa11.38□□□□□ -0.59
UBE2D3-208ENST00000394803 MSANTD4Q8NCY6 345 aa11.38□□□□□ -0.59
UBE2D3-208ENST00000394803 PAGE5Q96GU1 130 aa11.38□□□□□ -0.59
UBE2D3-208ENST00000394803 PHF20Q9BVI0 1012 aa11.38□□□□□ -0.59
UBE2D3-208ENST00000394803 LRP2BPQ9P2M1 347 aa11.38□□□□□ -0.59
UBE2D3-208ENST00000394803 TAOK2Q9UL54 1235 aa11.38□□□□□ -0.59
UBE2D3-208ENST00000394803 GUCY1A2P33402 732 aa11.37□□□□□ -0.59
UBE2D3-208ENST00000394803 RBL2Q08999 1139 aa11.37□□□□□ -0.59
UBE2D3-208ENST00000394803 GOLGA8FQ08AF8 430 aa11.37□□□□□ -0.59
UBE2D3-208ENST00000394803 GOLGA8DPQ0D2H9 430 aa11.37□□□□□ -0.59
UBE2D3-208ENST00000394803 DPYDQ12882 1025 aa11.37□□□□□ -0.59
UBE2D3-208ENST00000394803 KARSQ15046 597 aaKnown RBP11.37□□□□□ -0.59
UBE2D3-208ENST00000394803 LONRF2Q1L5Z9 754 aa11.37□□□□□ -0.59
UBE2D3-208ENST00000394803 KIF4BQ2VIQ3 1234 aa11.37□□□□□ -0.59
UBE2D3-208ENST00000394803 CCDC152Q4G0S7 254 aa11.37□□□□□ -0.59
UBE2D3-208ENST00000394803 CDC5LQ99459 802 aaKnown RBP11.37□□□□□ -0.59
UBE2D3-208ENST00000394803 NAPGQ99747 312 aaPredicted RBP11.37□□□□□ -0.59
UBE2D3-208ENST00000394803 FUT8Q9BYC5 575 aa11.37□□□□□ -0.59
UBE2D3-208ENST00000394803 LIMA1Q9UHB6 759 aaKnown RBP11.37□□□□□ -0.59
UBE2D3-208ENST00000394803 RWDD2AQ9UIY3 292 aa11.37□□□□□ -0.59
UBE2D3-208ENST00000394803 RAB21Q9UL25 225 aa11.37□□□□□ -0.59
UBE2D3-208ENST00000394803 ITGB4P16144 1822 aa11.37□□□□□ -0.59
UBE2D3-208ENST00000394803 FANCGO15287 622 aa11.37□□□□□ -0.59
UBE2D3-208ENST00000394803 POLR3GO15318 223 aaPredicted RBP11.37□□□□□ -0.59
UBE2D3-208ENST00000394803 SEC31AO94979 1220 aaKnown RBP11.37□□□□□ -0.59
UBE2D3-208ENST00000394803 NR5A1Q13285 461 aa11.37□□□□□ -0.59
UBE2D3-208ENST00000394803 HLFQ16534 295 aa11.37□□□□□ -0.59
UBE2D3-208ENST00000394803 TSR1Q2NL82 804 aaKnown RBP11.37□□□□□ -0.59
UBE2D3-208ENST00000394803 PARP10Q53GL7 1025 aa11.37□□□□□ -0.59
UBE2D3-208ENST00000394803 DZIP3Q86Y13 1208 aaKnown RBP11.37□□□□□ -0.59
UBE2D3-208ENST00000394803 ZNF34Q8IZ26 560 aa11.37□□□□□ -0.59
UBE2D3-208ENST00000394803 EHBP1Q8NDI1 1231 aa11.37□□□□□ -0.59
UBE2D3-208ENST00000394803 CCDC148Q8NFR7 591 aa11.37□□□□□ -0.59
UBE2D3-208ENST00000394803 ST7Q9NRC1 585 aa11.37□□□□□ -0.59
UBE2D3-208ENST00000394803 TNKSO95271 1327 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 SOS2Q07890 1332 aaPredicted RBP11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 CTAGE15A4D2H0 777 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 SOWAHDA6NJG2 315 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 MAP2K7O14733 419 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 GTPBP6O43824 516 aaPredicted RBP11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 MYL1P05976 194 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 CTAGE8P0CG41 777 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 CYP19A1P11511 503 aaPredicted RBP11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 ZNF827Q17R98 1081 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 HSP90AA4PQ58FG1 418 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 ZNF569Q5MCW4 686 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 IFIT1BQ5T764 474 aaKnown RBP11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 CTAGE6Q86UF2 777 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 CTAGE4Q8IX94 777 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 PIGBQ92521 554 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 SYMPKQ92797 1274 aaKnown RBP11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 RPGRIP1Q96KN7 1286 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 DESI2Q9BSY9 194 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 MRPL44Q9H9J2 332 aaKnown RBP11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 ASAP1Q9ULH1 1129 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 DISP2A7MBM2 1401 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 DLEC1Q9Y238 1755 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 MYH2Q9UKX2 1941 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 BCL9LQ86UU0 1499 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 MAGEB6P1A0A0J9YX57 407 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 LRRC10BA6NIK2 292 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms