RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 PKN1Q16512 942 aa17.34■□□□□ 0.37
CCT4-201ENST00000394440 CCDC82Q8N4S0 544 aa17.34■□□□□ 0.37
CCT4-201ENST00000394440 NEDD1Q8NHV4 660 aa17.34■□□□□ 0.37
CCT4-201ENST00000394440 BAZ2BQ9UIF8 2168 aaKnown RBP17.34■□□□□ 0.37
CCT4-201ENST00000394440 MMP1P03956 469 aa17.34■□□□□ 0.37
CCT4-201ENST00000394440 LIG1P18858 919 aa17.34■□□□□ 0.37
CCT4-201ENST00000394440 NOVP48745 357 aa17.34■□□□□ 0.37
CCT4-201ENST00000394440 NASPP49321 788 aaPredicted RBP17.34■□□□□ 0.37
CCT4-201ENST00000394440 CEBPZQ03701 1054 aaKnown RBP17.34■□□□□ 0.37
CCT4-201ENST00000394440 PICALMQ13492 652 aa17.34■□□□□ 0.37
CCT4-201ENST00000394440 KLHL34Q8N239 644 aa17.34■□□□□ 0.37
CCT4-201ENST00000394440 OSBPL5Q9H0X9 879 aaPredicted RBP17.34■□□□□ 0.37
CCT4-201ENST00000394440 ATF5Q9Y2D1 282 aaPredicted RBP17.34■□□□□ 0.37
CCT4-201ENST00000394440 PNMA1Q8ND90 353 aa17.33■□□□□ 0.36
CCT4-201ENST00000394440 CTCFLQ8NI51 663 aaPredicted RBP17.33■□□□□ 0.36
CCT4-201ENST00000394440 SHISA4Q96DD7 197 aa17.33■□□□□ 0.36
CCT4-201ENST00000394440 MTFR1LQ9H019 292 aa17.33■□□□□ 0.36
CCT4-201ENST00000394440 KAT14Q9H8E8 782 aa17.33■□□□□ 0.36
CCT4-201ENST00000394440 YEATS4O95619 227 aa17.32■□□□□ 0.36
CCT4-201ENST00000394440 TPRNQ4KMQ1 711 aa17.32■□□□□ 0.36
CCT4-201ENST00000394440 LINC00301Q8NCQ3 95 aa17.32■□□□□ 0.36
CCT4-201ENST00000394440 SERPINA10Q9UK55 444 aa17.32■□□□□ 0.36
CCT4-201ENST00000394440 SRBD1Q8N5C6 995 aaKnown RBP17.32■□□□□ 0.36
CCT4-201ENST00000394440 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.32■□□□□ 0.36
CCT4-201ENST00000394440 PCDHAC2Q9Y5I4 1007 aa17.32■□□□□ 0.36
CCT4-201ENST00000394440 MYO3BQ8WXR4 1341 aa17.32■□□□□ 0.36
CCT4-201ENST00000394440 GOLGA6L4A6NEF3 574 aa17.31■□□□□ 0.36
CCT4-201ENST00000394440 PTGER2P43116 358 aa17.31■□□□□ 0.36
CCT4-201ENST00000394440 TGFB2P61812 414 aa17.31■□□□□ 0.36
CCT4-201ENST00000394440 NFIAQ12857 509 aa17.31■□□□□ 0.36
CCT4-201ENST00000394440 CLIC4Q9Y696 253 aa17.31■□□□□ 0.36
CCT4-201ENST00000394440 GOLGB1Q14789 3259 aaKnown RBP17.31■□□□□ 0.36
CCT4-201ENST00000394440 LETM1O95202 739 aaPredicted RBP17.31■□□□□ 0.36
CCT4-201ENST00000394440 GRM4Q14833 912 aa17.31■□□□□ 0.36
CCT4-201ENST00000394440 TMEM47Q9BQJ4 181 aa17.31■□□□□ 0.36
CCT4-201ENST00000394440 IDI2Q9BXS1 227 aa17.31■□□□□ 0.36
CCT4-201ENST00000394440 PANK2Q9BZ23 570 aa17.3■□□□□ 0.36
CCT4-201ENST00000394440 VPS33BQ9H267 617 aa17.3■□□□□ 0.36
CCT4-201ENST00000394440 KCNJ14Q9UNX9 436 aa17.3■□□□□ 0.36
CCT4-201ENST00000394440 NPM3O75607 178 aaKnown RBP17.3■□□□□ 0.36
CCT4-201ENST00000394440 KIF5BP33176 963 aa17.3■□□□□ 0.36
CCT4-201ENST00000394440 DIS3L2Q8IYB7 885 aaKnown RBP17.3■□□□□ 0.36
CCT4-201ENST00000394440 FOXP1Q9H334 677 aaPredicted RBP17.3■□□□□ 0.36
CCT4-201ENST00000394440 SERPINB13Q9UIV8 391 aa17.3■□□□□ 0.36
CCT4-201ENST00000394440 AKAP17AQ02040 695 aaKnown RBP17.29■□□□□ 0.36
CCT4-201ENST00000394440 ANO1Q5XXA6 986 aa17.29■□□□□ 0.36
CCT4-201ENST00000394440 BICD2Q8TD16 824 aa17.29■□□□□ 0.36
CCT4-201ENST00000394440 RBSNQ9H1K0 784 aa17.29■□□□□ 0.36
CCT4-201ENST00000394440 EHD4Q9H223 541 aa17.29■□□□□ 0.36
CCT4-201ENST00000394440 SWAP70Q9UH65 585 aa17.29■□□□□ 0.36
CCT4-201ENST00000394440 V9GY48 417 aaPredicted RBP17.29■□□□□ 0.36
CCT4-201ENST00000394440 BTBD18B2RXH4 712 aa17.29■□□□□ 0.36
CCT4-201ENST00000394440 SOGA3Q5TF21 947 aa17.29■□□□□ 0.36
CCT4-201ENST00000394440 NOSTRINQ8IVI9 506 aa17.29■□□□□ 0.36
CCT4-201ENST00000394440 KCNG4Q8TDN1 519 aa17.29■□□□□ 0.36
CCT4-201ENST00000394440 DDX19AQ9NUU7 478 aaKnown RBP17.29■□□□□ 0.36
CCT4-201ENST00000394440 DACT1Q9NYF0 836 aa17.29■□□□□ 0.36
CCT4-201ENST00000394440 MAD2L2Q9UI95 211 aa17.29■□□□□ 0.36
CCT4-201ENST00000394440 STX8Q9UNK0 236 aa17.29■□□□□ 0.36
CCT4-201ENST00000394440 IGKV6D-41A0A0C4DH26 115 aa17.28■□□□□ 0.36
CCT4-201ENST00000394440 CEP95Q96GE4 821 aa17.28■□□□□ 0.36
CCT4-201ENST00000394440 FUCA2Q9BTY2 467 aa17.28■□□□□ 0.36
CCT4-201ENST00000394440 PHF20Q9BVI0 1012 aa17.28■□□□□ 0.36
CCT4-201ENST00000394440 PIM2Q9P1W9 311 aa17.28■□□□□ 0.36
CCT4-201ENST00000394440 FAM198AQ9UFP1 575 aa17.28■□□□□ 0.36
CCT4-201ENST00000394440 PCDHA7Q9UN72 937 aa17.28■□□□□ 0.36
CCT4-201ENST00000394440 MYH4Q9Y623 1939 aa17.28■□□□□ 0.36
CCT4-201ENST00000394440 DCAF8L1A6NGE4 600 aa17.28■□□□□ 0.36
CCT4-201ENST00000394440 SAFBQ15424 915 aaKnown RBP eCLIP17.28■□□□□ 0.36
CCT4-201ENST00000394440 ZNF277Q9NRM2 450 aaPredicted RBP17.28■□□□□ 0.36
CCT4-201ENST00000394440 hCG_1642624A0A1W2PR95 340 aa17.27■□□□□ 0.36
CCT4-201ENST00000394440 SPTLC2O15270 562 aa17.27■□□□□ 0.36
CCT4-201ENST00000394440 NR1I2O75469 434 aa17.27■□□□□ 0.36
CCT4-201ENST00000394440 POLD1P28340 1107 aa17.27■□□□□ 0.36
CCT4-201ENST00000394440 SHMT1P34896 483 aa17.27■□□□□ 0.36
CCT4-201ENST00000394440 GNL2Q13823 731 aaKnown RBP17.27■□□□□ 0.36
CCT4-201ENST00000394440 STK38Q15208 465 aa17.27■□□□□ 0.36
CCT4-201ENST00000394440 ADALQ6DHV7 355 aa17.27■□□□□ 0.36
CCT4-201ENST00000394440 ZFPM1Q8IX07 1006 aa17.27■□□□□ 0.36
CCT4-201ENST00000394440 STAG2Q8N3U4 1231 aa17.27■□□□□ 0.36
CCT4-201ENST00000394440 GMLQ99445 158 aa17.27■□□□□ 0.36
CCT4-201ENST00000394440 SGIP1Q9BQI5 828 aa17.27■□□□□ 0.36
CCT4-201ENST00000394440 TSPY26PQ9H489 355 aa17.27■□□□□ 0.36
CCT4-201ENST00000394440 VPS54Q9P1Q0 977 aa17.27■□□□□ 0.36
CCT4-201ENST00000394440 COL2A1P02458 1487 aaPredicted RBP17.27■□□□□ 0.36
CCT4-201ENST00000394440 A0A1W2PQ27 194 aa17.27■□□□□ 0.36
CCT4-201ENST00000394440 A0A1W2PQ64 194 aa17.27■□□□□ 0.36
CCT4-201ENST00000394440 A0A1W2PQD8 194 aa17.27■□□□□ 0.36
CCT4-201ENST00000394440 PALM3A6NDB9 673 aaPredicted RBP17.27■□□□□ 0.36
CCT4-201ENST00000394440 HLA-DOAP06340 250 aa17.27■□□□□ 0.36
CCT4-201ENST00000394440 VIL1P09327 827 aaKnown RBP17.27■□□□□ 0.36
CCT4-201ENST00000394440 XBP1P17861 261 aa17.27■□□□□ 0.36
CCT4-201ENST00000394440 ME1P48163 572 aa17.27■□□□□ 0.36
CCT4-201ENST00000394440 SLC39A14Q15043 492 aa17.27■□□□□ 0.36
CCT4-201ENST00000394440 PTPAQ15257 358 aa17.27■□□□□ 0.36
CCT4-201ENST00000394440 NPY5RQ15761 445 aa17.27■□□□□ 0.36
CCT4-201ENST00000394440 RSBN1LQ6PCB5 846 aaPredicted RBP17.27■□□□□ 0.36
CCT4-201ENST00000394440 RBM43Q6ZSC3 357 aaKnown RBP17.27■□□□□ 0.36
CCT4-201ENST00000394440 LARGE2Q8N3Y3 721 aa17.27■□□□□ 0.36
CCT4-201ENST00000394440 NUP62CLQ9H1M0 184 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms