RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 DHX37Q8IY37 1157 aaKnown RBP16.11■□□□□ 0.17
PPARGC1B-203ENST00000394320 SPHKAPQ2M3C7 1700 aa16.11■□□□□ 0.17
PPARGC1B-203ENST00000394320 PTCH1Q13635 1447 aa16.11■□□□□ 0.17
PPARGC1B-203ENST00000394320 PABPN1LA6NDY0 278 aaKnown RBP16.11■□□□□ 0.17
PPARGC1B-203ENST00000394320 PPEF1O14829 653 aaPredicted RBP16.11■□□□□ 0.17
PPARGC1B-203ENST00000394320 MYCLP12524 364 aaPredicted RBP16.11■□□□□ 0.17
PPARGC1B-203ENST00000394320 SCG2P13521 617 aa16.11■□□□□ 0.17
PPARGC1B-203ENST00000394320 FANCCQ00597 558 aa16.11■□□□□ 0.17
PPARGC1B-203ENST00000394320 RAPGEF1Q13905 1077 aa16.11■□□□□ 0.17
PPARGC1B-203ENST00000394320 ZYXQ15942 572 aaKnown RBP16.11■□□□□ 0.17
PPARGC1B-203ENST00000394320 CERKLQ49MI3 558 aaPredicted RBP16.11■□□□□ 0.17
PPARGC1B-203ENST00000394320 KRT27Q7Z3Y8 459 aa16.11■□□□□ 0.17
PPARGC1B-203ENST00000394320 KCNJ14Q9UNX9 436 aa16.11■□□□□ 0.17
PPARGC1B-203ENST00000394320 RPAP1Q9BWH6 1393 aaPredicted RBP16.11■□□□□ 0.17
PPARGC1B-203ENST00000394320 TRPM1Q7Z4N2 1603 aa16.11■□□□□ 0.17
PPARGC1B-203ENST00000394320 SERPINB2P05120 415 aa16.11■□□□□ 0.17
PPARGC1B-203ENST00000394320 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.11■□□□□ 0.17
PPARGC1B-203ENST00000394320 JAKMIP2Q96AA8 810 aa16.11■□□□□ 0.17
PPARGC1B-203ENST00000394320 ALKQ9UM73 1620 aa16.11■□□□□ 0.17
PPARGC1B-203ENST00000394320 GPATCH4Q5T3I0 446 aaKnown RBP16.11■□□□□ 0.17
PPARGC1B-203ENST00000394320 DPY19L2Q6NUT2 758 aa16.11■□□□□ 0.17
PPARGC1B-203ENST00000394320 LSG1Q9H089 658 aaKnown RBP16.11■□□□□ 0.17
PPARGC1B-203ENST00000394320 LMTK2Q8IWU2 1503 aa16.11■□□□□ 0.17
PPARGC1B-203ENST00000394320 ABCA9Q8IUA7 1624 aa16.11■□□□□ 0.17
PPARGC1B-203ENST00000394320 MED14O60244 1454 aa16.1■□□□□ 0.17
PPARGC1B-203ENST00000394320 USP31Q70CQ4 1352 aa16.1■□□□□ 0.17
PPARGC1B-203ENST00000394320 MAP3K9P80192 1104 aa16.1■□□□□ 0.17
PPARGC1B-203ENST00000394320 CCDC122Q5T0U0 273 aa16.1■□□□□ 0.17
PPARGC1B-203ENST00000394320 TMTC1Q8IUR5 882 aa16.1■□□□□ 0.17
PPARGC1B-203ENST00000394320 SLFN12Q8IYM2 578 aa16.1■□□□□ 0.17
PPARGC1B-203ENST00000394320 CPXCR1Q8N123 301 aa16.1■□□□□ 0.17
PPARGC1B-203ENST00000394320 TRIML1Q8N9V2 468 aa16.1■□□□□ 0.17
PPARGC1B-203ENST00000394320 CSRNP2Q9H175 543 aa16.1■□□□□ 0.17
PPARGC1B-203ENST00000394320 PKD2L1Q9P0L9 805 aa16.1■□□□□ 0.17
PPARGC1B-203ENST00000394320 CEP128Q6ZU80 1094 aa16.1■□□□□ 0.17
PPARGC1B-203ENST00000394320 OTUD6AQ7L8S5 288 aa16.1■□□□□ 0.17
PPARGC1B-203ENST00000394320 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.1■□□□□ 0.17
PPARGC1B-203ENST00000394320 TNFAIP3P21580 790 aa16.1■□□□□ 0.17
PPARGC1B-203ENST00000394320 RXRBP28702 533 aa16.1■□□□□ 0.17
PPARGC1B-203ENST00000394320 ZNF569Q5MCW4 686 aa16.1■□□□□ 0.17
PPARGC1B-203ENST00000394320 NOX5Q96PH1 765 aa16.1■□□□□ 0.17
PPARGC1B-203ENST00000394320 MTRF1LQ9UGC7 380 aaKnown RBP16.1■□□□□ 0.17
PPARGC1B-203ENST00000394320 KLRF2D3W0D1 207 aa16.1■□□□□ 0.17
PPARGC1B-203ENST00000394320 VAV2P52735 878 aa16.1■□□□□ 0.17
PPARGC1B-203ENST00000394320 FAM173BQ6P4H8 233 aa16.1■□□□□ 0.17
PPARGC1B-203ENST00000394320 GLI2P10070 1586 aa16.1■□□□□ 0.17
PPARGC1B-203ENST00000394320 TULP4Q9NRJ4 1543 aa16.09■□□□□ 0.17
PPARGC1B-203ENST00000394320 GRM1Q13255 1194 aa16.09■□□□□ 0.17
PPARGC1B-203ENST00000394320 COMMD10Q9Y6G5 202 aa16.09■□□□□ 0.17
PPARGC1B-203ENST00000394320 H0YCG3 227 aa16.09■□□□□ 0.17
PPARGC1B-203ENST00000394320 hCG_1984214I3L0E3 225 aa16.09■□□□□ 0.17
PPARGC1B-203ENST00000394320 TRAPPC10P48553 1259 aa16.09■□□□□ 0.17
PPARGC1B-203ENST00000394320 ICA1Q05084 483 aa16.09■□□□□ 0.17
PPARGC1B-203ENST00000394320 KRT26Q7Z3Y9 468 aa16.09■□□□□ 0.17
PPARGC1B-203ENST00000394320 ZNF713Q8N859 430 aaPredicted RBP16.09■□□□□ 0.17
PPARGC1B-203ENST00000394320 PSTPIP2Q9H939 334 aa16.09■□□□□ 0.17
PPARGC1B-203ENST00000394320 MAGEF1Q9HAY2 307 aa16.09■□□□□ 0.17
PPARGC1B-203ENST00000394320 LMBRD1Q9NUN5 540 aa16.09■□□□□ 0.17
PPARGC1B-203ENST00000394320 NFE2L3Q9Y4A8 694 aa16.09■□□□□ 0.17
PPARGC1B-203ENST00000394320 PIGBQ92521 554 aa16.09■□□□□ 0.17
PPARGC1B-203ENST00000394320 ZNF335Q9H4Z2 1342 aaPredicted RBP16.09■□□□□ 0.17
PPARGC1B-203ENST00000394320 TRPC3Q13507 836 aa16.08■□□□□ 0.17
PPARGC1B-203ENST00000394320 SLC9C1Q4G0N8 1177 aa16.08■□□□□ 0.17
PPARGC1B-203ENST00000394320 KRT222Q8N1A0 295 aa16.08■□□□□ 0.17
PPARGC1B-203ENST00000394320 POLR3GO15318 223 aaPredicted RBP16.08■□□□□ 0.17
PPARGC1B-203ENST00000394320 GAS7O60861 476 aa16.08■□□□□ 0.17
PPARGC1B-203ENST00000394320 CMA1P23946 247 aa16.08■□□□□ 0.17
PPARGC1B-203ENST00000394320 POLA2Q14181 598 aa16.08■□□□□ 0.17
PPARGC1B-203ENST00000394320 USH1GQ495M9 461 aa16.08■□□□□ 0.17
PPARGC1B-203ENST00000394320 ASPRV1Q53RT3 343 aa16.08■□□□□ 0.17
PPARGC1B-203ENST00000394320 SEL1L2Q5TEA6 688 aa16.08■□□□□ 0.17
PPARGC1B-203ENST00000394320 LIN9Q5TKA1 542 aa16.08■□□□□ 0.17
PPARGC1B-203ENST00000394320 NEK8Q86SG6 692 aa16.08■□□□□ 0.17
PPARGC1B-203ENST00000394320 RGS22Q8NE09 1264 aa16.08■□□□□ 0.17
PPARGC1B-203ENST00000394320 SDR42E1Q8WUS8 393 aa16.08■□□□□ 0.17
PPARGC1B-203ENST00000394320 PUS3Q9BZE2 481 aaKnown RBP16.08■□□□□ 0.17
PPARGC1B-203ENST00000394320 IQCGQ9H095 443 aaKnown RBP16.08■□□□□ 0.17
PPARGC1B-203ENST00000394320 VPS16Q9H269 839 aa16.08■□□□□ 0.17
PPARGC1B-203ENST00000394320 BCS1LQ9Y276 419 aa16.08■□□□□ 0.17
PPARGC1B-203ENST00000394320 SETBP1Q9Y6X0 1596 aa16.08■□□□□ 0.17
PPARGC1B-203ENST00000394320 CLUL1Q15846 466 aa16.08■□□□□ 0.16
PPARGC1B-203ENST00000394320 ASIC2Q16515 512 aa16.08■□□□□ 0.16
PPARGC1B-203ENST00000394320 SEC62Q99442 399 aaKnown RBP16.08■□□□□ 0.16
PPARGC1B-203ENST00000394320 RNF26Q9BY78 433 aaPredicted RBP16.08■□□□□ 0.16
PPARGC1B-203ENST00000394320 NSRP1Q9H0G5 558 aaKnown RBP16.08■□□□□ 0.16
PPARGC1B-203ENST00000394320 LZTFL1Q9NQ48 299 aa16.08■□□□□ 0.16
PPARGC1B-203ENST00000394320 CALCOCO1Q9P1Z2 691 aa16.08■□□□□ 0.16
PPARGC1B-203ENST00000394320 GSTA5Q7RTV2 222 aa16.08■□□□□ 0.16
PPARGC1B-203ENST00000394320 FBXO11Q86XK2 927 aa16.08■□□□□ 0.16
PPARGC1B-203ENST00000394320 GOLGA5Q8TBA6 731 aa16.08■□□□□ 0.16
PPARGC1B-203ENST00000394320 CBX8Q9HC52 389 aa16.08■□□□□ 0.16
PPARGC1B-203ENST00000394320 NOD1Q9Y239 953 aa16.08■□□□□ 0.16
PPARGC1B-203ENST00000394320 SSX2IPQ9Y2D8 614 aa16.08■□□□□ 0.16
PPARGC1B-203ENST00000394320 PALLDQ8WX93 1383 aa16.08■□□□□ 0.16
PPARGC1B-203ENST00000394320 H7C1W4 665 aa16.07■□□□□ 0.16
PPARGC1B-203ENST00000394320 ADD2P35612 726 aa16.07■□□□□ 0.16
PPARGC1B-203ENST00000394320 ZNF75DP51815 510 aa16.07■□□□□ 0.16
PPARGC1B-203ENST00000394320 PLCB3Q01970 1234 aa16.07■□□□□ 0.16
PPARGC1B-203ENST00000394320 KIAA0825Q8IV33 1275 aa16.07■□□□□ 0.16
PPARGC1B-203ENST00000394320 ARFGAP2Q8N6H7 521 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms