RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 LGR5O75473 907 aa6.94□□□□□ -1.3
CASC3-202ENST00000394114 UQCRFS1P1P0C7P4 283 aa6.94□□□□□ -1.3
CASC3-202ENST00000394114 EZH2Q15910 746 aaKnown RBP6.94□□□□□ -1.3
CASC3-202ENST00000394114 SWT1Q5T5J6 900 aaKnown RBP6.94□□□□□ -1.3
CASC3-202ENST00000394114 RPGRQ92834 1020 aaKnown RBP6.94□□□□□ -1.3
CASC3-202ENST00000394114 DMRTB1Q96MA1 342 aa6.94□□□□□ -1.3
CASC3-202ENST00000394114 GPR101Q96P66 508 aaPredicted RBP6.94□□□□□ -1.3
CASC3-202ENST00000394114 PCDH12Q9NPG4 1184 aa6.94□□□□□ -1.3
CASC3-202ENST00000394114 HELLSQ9NRZ9 838 aa6.94□□□□□ -1.3
CASC3-202ENST00000394114 ABCF2Q9UG63 623 aa6.94□□□□□ -1.3
CASC3-202ENST00000394114 CYP21A2P08686 494 aa6.94□□□□□ -1.3
CASC3-202ENST00000394114 HSPD1P10809 573 aaKnown RBP6.94□□□□□ -1.3
CASC3-202ENST00000394114 HAND2P61296 217 aa6.94□□□□□ -1.3
CASC3-202ENST00000394114 RACK1P63244 317 aaKnown RBP6.94□□□□□ -1.3
CASC3-202ENST00000394114 ST5P78524 1137 aa6.94□□□□□ -1.3
CASC3-202ENST00000394114 RNF20Q5VTR2 975 aa6.94□□□□□ -1.3
CASC3-202ENST00000394114 MAGEB6Q8N7X4 407 aa6.94□□□□□ -1.3
CASC3-202ENST00000394114 HINFPQ9BQA5 517 aa6.94□□□□□ -1.3
CASC3-202ENST00000394114 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.94□□□□□ -1.3
CASC3-202ENST00000394114 ANKIB1Q9P2G1 1089 aa6.94□□□□□ -1.3
CASC3-202ENST00000394114 CYP46A1Q9Y6A2 500 aa6.94□□□□□ -1.3
CASC3-202ENST00000394114 ZNF532Q9HCE3 1301 aa6.94□□□□□ -1.3
CASC3-202ENST00000394114 TNS1Q9HBL0 1735 aaKnown RBP6.93□□□□□ -1.3
CASC3-202ENST00000394114 POLRMTO00411 1230 aaKnown RBP6.93□□□□□ -1.3
CASC3-202ENST00000394114 ENPP3O14638 875 aa6.93□□□□□ -1.3
CASC3-202ENST00000394114 STK10O94804 968 aaKnown RBP6.93□□□□□ -1.3
CASC3-202ENST00000394114 XRCC5P13010 732 aaKnown RBP6.93□□□□□ -1.3
CASC3-202ENST00000394114 PDE6AP16499 860 aa6.93□□□□□ -1.3
CASC3-202ENST00000394114 PTK2Q05397 1052 aa6.93□□□□□ -1.3
CASC3-202ENST00000394114 PKP1Q13835 747 aa6.93□□□□□ -1.3
CASC3-202ENST00000394114 RUFY3Q7L099 469 aa6.93□□□□□ -1.3
CASC3-202ENST00000394114 TXNRD3Q86VQ6 643 aa6.93□□□□□ -1.3
CASC3-202ENST00000394114 IPO4Q8TEX9 1081 aaKnown RBP6.93□□□□□ -1.3
CASC3-202ENST00000394114 APPBP2Q92624 585 aa6.93□□□□□ -1.3
CASC3-202ENST00000394114 TTC14Q96N46 770 aa6.93□□□□□ -1.3
CASC3-202ENST00000394114 COLQQ9Y215 455 aaPredicted RBP6.93□□□□□ -1.3
CASC3-202ENST00000394114 GPAA1O43292 621 aa6.93□□□□□ -1.3
CASC3-202ENST00000394114 LARGE1O95461 756 aa6.93□□□□□ -1.3
CASC3-202ENST00000394114 ADD2P35612 726 aa6.93□□□□□ -1.3
CASC3-202ENST00000394114 DDIT3P35638 169 aa6.93□□□□□ -1.3
CASC3-202ENST00000394114 TTF1Q15361 905 aaPredicted RBP6.93□□□□□ -1.3
CASC3-202ENST00000394114 LRRFIP1Q32MZ4 808 aaKnown RBP6.93□□□□□ -1.3
CASC3-202ENST00000394114 ZNF654Q8IZM8 581 aa6.93□□□□□ -1.3
CASC3-202ENST00000394114 MORC4Q8TE76 937 aa6.93□□□□□ -1.3
CASC3-202ENST00000394114 ZNF512BQ96KM6 892 aaPredicted RBP6.93□□□□□ -1.3
CASC3-202ENST00000394114 FAM84BQ96KN1 310 aaPredicted RBP6.93□□□□□ -1.3
CASC3-202ENST00000394114 LRRC2Q9BYS8 371 aa6.93□□□□□ -1.3
CASC3-202ENST00000394114 PDRG1Q9NUG6 133 aa6.93□□□□□ -1.3
CASC3-202ENST00000394114 MAP10Q9P2G4 905 aa6.93□□□□□ -1.3
CASC3-202ENST00000394114 LRP2BPQ9P2M1 347 aa6.93□□□□□ -1.3
CASC3-202ENST00000394114 DOLKQ9UPQ8 538 aa6.93□□□□□ -1.3
CASC3-202ENST00000394114 PCDHGA11Q9Y5H2 935 aa6.93□□□□□ -1.3
CASC3-202ENST00000394114 FOXP2O15409 715 aa6.92□□□□□ -1.3
CASC3-202ENST00000394114 APPP05067 770 aa6.92□□□□□ -1.3
CASC3-202ENST00000394114 ZFYP08048 801 aaPredicted RBP6.92□□□□□ -1.3
CASC3-202ENST00000394114 MMP10P09238 476 aa6.92□□□□□ -1.3
CASC3-202ENST00000394114 NUDT7P0C024 238 aa6.92□□□□□ -1.3
CASC3-202ENST00000394114 CHAF1AQ13111 956 aaPredicted RBP6.92□□□□□ -1.3
CASC3-202ENST00000394114 UBE4AQ14139 1066 aa6.92□□□□□ -1.3
CASC3-202ENST00000394114 NAA30Q147X3 362 aaPredicted RBP6.92□□□□□ -1.3
CASC3-202ENST00000394114 ZNF394Q53GI3 561 aa6.92□□□□□ -1.3
CASC3-202ENST00000394114 CAVIN4Q5BKX8 364 aa6.92□□□□□ -1.3
CASC3-202ENST00000394114 BLOC1S2Q6QNY1 142 aa6.92□□□□□ -1.3
CASC3-202ENST00000394114 STOX1Q6ZVD7 989 aa6.92□□□□□ -1.3
CASC3-202ENST00000394114 RPUSD2Q8IZ73 545 aaKnown RBP6.92□□□□□ -1.3
CASC3-202ENST00000394114 MIGA1Q8NAN2 632 aa6.92□□□□□ -1.3
CASC3-202ENST00000394114 ALKBH8Q96BT7 664 aaKnown RBP6.92□□□□□ -1.3
CASC3-202ENST00000394114 IRF2BPLQ9H1B7 796 aa6.92□□□□□ -1.3
CASC3-202ENST00000394114 ZSWIM6Q9HCJ5 1215 aa6.92□□□□□ -1.3
CASC3-202ENST00000394114 MYH13Q9UKX3 1938 aa6.92□□□□□ -1.3
CASC3-202ENST00000394114 COL1A1P02452 1464 aaPredicted RBP6.92□□□□□ -1.3
CASC3-202ENST00000394114 LAMA4Q16363 1823 aa6.92□□□□□ -1.3
CASC3-202ENST00000394114 PEX14O75381 377 aa6.92□□□□□ -1.3
CASC3-202ENST00000394114 MPSTP25325 297 aa6.92□□□□□ -1.3
CASC3-202ENST00000394114 GRAPQ13588 217 aa6.92□□□□□ -1.3
CASC3-202ENST00000394114 PDXDC2PQ6P474 469 aa6.92□□□□□ -1.3
CASC3-202ENST00000394114 CHST3Q7LGC8 479 aa6.92□□□□□ -1.3
CASC3-202ENST00000394114 GRAPLQ8TC17 118 aaPredicted RBP6.92□□□□□ -1.3
CASC3-202ENST00000394114 TNPO1Q92973 898 aaKnown RBP6.92□□□□□ -1.3
CASC3-202ENST00000394114 IL17RAQ96F46 866 aa6.92□□□□□ -1.3
CASC3-202ENST00000394114 FAM129BQ96TA1 746 aa6.92□□□□□ -1.3
CASC3-202ENST00000394114 CYLDQ9NQC7 956 aa6.92□□□□□ -1.3
CASC3-202ENST00000394114 RAI14Q9P0K7 980 aa6.92□□□□□ -1.3
CASC3-202ENST00000394114 NSFL1CQ9UNZ2 370 aaKnown RBP6.92□□□□□ -1.3
CASC3-202ENST00000394114 ZNF804BA4D1E1 1349 aa6.92□□□□□ -1.3
CASC3-202ENST00000394114 PNPLA7Q6ZV29 1317 aa6.92□□□□□ -1.3
CASC3-202ENST00000394114 RPAP1Q9BWH6 1393 aaPredicted RBP6.92□□□□□ -1.3
CASC3-202ENST00000394114 MBD4O95243 580 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 FGAP02671 866 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 PSMA5P28066 241 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 MCM2P49736 904 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 MAP3K12Q12852 859 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 PLEKHG6Q3KR16 790 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 ZSCAN25Q6NSZ9 544 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 OLFM4Q6UX06 510 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 FAM43BQ6ZT52 329 aaPredicted RBP6.91□□□□□ -1.3
CASC3-202ENST00000394114 FILIP1Q7Z7B0 1213 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 TEX2Q8IWB9 1127 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 NECAB1Q8N987 351 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 AIDAQ96BJ3 306 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms